RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 CLEC2BQ92478 149 aa16.38■□□□□ 0.21
SNF8-202ENST00000502492 NSD1Q96L73 2696 aaPredicted RBP16.37■□□□□ 0.21
SNF8-202ENST00000502492 GAGE12JA6NER3 117 aa16.37■□□□□ 0.21
SNF8-202ENST00000502492 GAGE4Q13068 117 aa16.37■□□□□ 0.21
SNF8-202ENST00000502492 GAGE5Q13069 117 aa16.37■□□□□ 0.21
SNF8-202ENST00000502492 NOP10Q9NPE3 64 aaKnown RBP16.37■□□□□ 0.21
SNF8-202ENST00000502492 CUBNO60494 3623 aa16.37■□□□□ 0.21
SNF8-202ENST00000502492 F5H768 121 aa16.36■□□□□ 0.21
SNF8-202ENST00000502492 ZNF625Q96I27 306 aaPredicted RBP16.36■□□□□ 0.21
SNF8-202ENST00000502492 WNK1Q9H4A3 2382 aa16.36■□□□□ 0.21
SNF8-202ENST00000502492 UBE2WQ96B02 151 aa16.36■□□□□ 0.21
SNF8-202ENST00000502492 CMC4P56277 68 aaPredicted RBP16.35■□□□□ 0.21
SNF8-202ENST00000502492 PLAC8L1A1L4L8 177 aa16.35■□□□□ 0.21
SNF8-202ENST00000502492 CRLF1O75462 422 aa16.35■□□□□ 0.21
SNF8-202ENST00000502492 FN1P02751 2386 aaKnown RBP16.34■□□□□ 0.21
SNF8-202ENST00000502492 HILS1P60008 231 aa16.34■□□□□ 0.21
SNF8-202ENST00000502492 CITED1Q99966 193 aa16.34■□□□□ 0.21
SNF8-202ENST00000502492 COPS9Q8WXC6 57 aa16.34■□□□□ 0.21
SNF8-202ENST00000502492 C16orf74Q96GX8 76 aa16.33■□□□□ 0.2
SNF8-202ENST00000502492 SOSTDC1Q6X4U4 206 aa16.32■□□□□ 0.2
SNF8-202ENST00000502492 TMEM243Q9BU79 118 aa16.32■□□□□ 0.2
SNF8-202ENST00000502492 PRIMA1Q86XR5 153 aa16.31■□□□□ 0.2
SNF8-202ENST00000502492 RNASE1P07998 156 aaKnown RBP16.31■□□□□ 0.2
SNF8-202ENST00000502492 FAM110AQ9BQ89 295 aa16.31■□□□□ 0.2
SNF8-202ENST00000502492 TRAV8-4A0A0B4J246 113 aa16.3■□□□□ 0.2
SNF8-202ENST00000502492 A0A0U1RRA0 63 aa16.3■□□□□ 0.2
SNF8-202ENST00000502492 HERV-K104P63124 156 aa16.3■□□□□ 0.2
SNF8-202ENST00000502492 NF1P21359 2839 aa16.3■□□□□ 0.2
SNF8-202ENST00000502492 LINC01006Q8NI28 216 aa16.3■□□□□ 0.2
SNF8-202ENST00000502492 C19orf73Q9NVV2 129 aa16.29■□□□□ 0.2
SNF8-202ENST00000502492 UBE2L6O14933 153 aa16.29■□□□□ 0.2
SNF8-202ENST00000502492 PPDPFQ9H3Y8 114 aa16.29■□□□□ 0.2
SNF8-202ENST00000502492 MAST4O15021 2626 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 TRBV6-4A0A1B0GX49 114 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 SHISA2Q6UWI4 295 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 OVOL2Q9BRP0 275 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 WFDC10AQ9H1F0 79 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 C16orf95Q9H693 158 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 TRGV2A0A075B6R0 118 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 GAGE7O76087 117 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 GAGE12FP0CL80 117 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 GAGE12GP0CL81 117 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 GAGE12IP0CL82 117 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 DEFB121Q5J5C9 76 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 MEIG1Q5JSS6 88 aa16.28■□□□□ 0.2
SNF8-202ENST00000502492 IGLV1-51P01701 117 aa16.27■□□□□ 0.2
SNF8-202ENST00000502492 CSNK1G2-AS1Q8NCQ2 148 aa16.27■□□□□ 0.2
SNF8-202ENST00000502492 LOC100131303A0A0U1RQF7 123 aa16.26■□□□□ 0.19
SNF8-202ENST00000502492 COX7A2LO14548 114 aa16.26■□□□□ 0.19
SNF8-202ENST00000502492 SNCGO76070 127 aa16.25■□□□□ 0.19
SNF8-202ENST00000502492 RPL35AP18077 110 aaKnown RBP16.25■□□□□ 0.19
SNF8-202ENST00000502492 NOTCH3Q9UM47 2321 aa16.22■□□□□ 0.19
SNF8-202ENST00000502492 FAM240AA0A1B0GVK7 77 aa16.21■□□□□ 0.19
SNF8-202ENST00000502492 TRGV4A0A0C4DH28 118 aa16.2■□□□□ 0.18
SNF8-202ENST00000502492 GAGE2BQ13066 116 aa16.2■□□□□ 0.18
SNF8-202ENST00000502492 GAGE2EQ4V326 116 aa16.2■□□□□ 0.18
SNF8-202ENST00000502492 GAGE2DQ9UEU5 116 aa16.2■□□□□ 0.18
SNF8-202ENST00000502492 C2CD3Q4AC94 2353 aa16.2■□□□□ 0.18
SNF8-202ENST00000502492 FHL2Q14192 279 aa16.19■□□□□ 0.18
SNF8-202ENST00000502492 JMJD1CQ15652 2540 aa16.19■□□□□ 0.18
SNF8-202ENST00000502492 NIPBLQ6KC79 2804 aaeCLIP16.19■□□□□ 0.18
SNF8-202ENST00000502492 TRAV26-1A0A087WT03 109 aa16.19■□□□□ 0.18
SNF8-202ENST00000502492 Q6Q795 121 aa16.19■□□□□ 0.18
SNF8-202ENST00000502492 COX7B2Q8TF08 81 aa16.19■□□□□ 0.18
SNF8-202ENST00000502492 C15orf53Q8NAA6 179 aa16.18■□□□□ 0.18
SNF8-202ENST00000502492 GAGE6Q13070 117 aa16.18■□□□□ 0.18
SNF8-202ENST00000502492 ANAPC13Q9BS18 74 aa16.18■□□□□ 0.18
SNF8-202ENST00000502492 TEP1Q99973 2627 aaKnown RBP16.17■□□□□ 0.18
SNF8-202ENST00000502492 TRBV6-8A0A0A6YYG3 113 aa16.17■□□□□ 0.18
SNF8-202ENST00000502492 MRPL23Q16540 153 aaKnown RBP16.17■□□□□ 0.18
SNF8-202ENST00000502492 IGLV4-60A0A075B6I1 120 aa16.16■□□□□ 0.18
SNF8-202ENST00000502492 TRACP01848 142 aa16.16■□□□□ 0.18
SNF8-202ENST00000502492 IGHV3OR16-9A0A0B4J2B5 98 aa16.14■□□□□ 0.18
SNF8-202ENST00000502492 PF4P02776 101 aa16.14■□□□□ 0.18
SNF8-202ENST00000502492 SETD2Q9BYW2 2564 aaPredicted RBP16.14■□□□□ 0.17
SNF8-202ENST00000502492 TRAV13-2A0A0B4J235 113 aa16.13■□□□□ 0.17
SNF8-202ENST00000502492 FAM222AQ5U5X8 452 aa16.13■□□□□ 0.17
SNF8-202ENST00000502492 MIR7-3HGQ8N6C7 128 aa16.13■□□□□ 0.17
SNF8-202ENST00000502492 NHLRC4P0CG21 123 aaPredicted RBP16.12■□□□□ 0.17
SNF8-202ENST00000502492 CHCHD5Q9BSY4 110 aa16.12■□□□□ 0.17
SNF8-202ENST00000502492 IGKV3OR2-268A0A0C4DH90 116 aa16.11■□□□□ 0.17
SNF8-202ENST00000502492 NDUFV3P56181 108 aaKnown RBP16.11■□□□□ 0.17
SNF8-202ENST00000502492 RPL28P46779 137 aaKnown RBP16.11■□□□□ 0.17
SNF8-202ENST00000502492 TOMM7Q9P0U1 55 aa16.11■□□□□ 0.17
SNF8-202ENST00000502492 A0A087WZ39 114 aa16.1■□□□□ 0.17
SNF8-202ENST00000502492 FAM218AQ96MZ4 157 aa16.1■□□□□ 0.17
SNF8-202ENST00000502492 IGKV2-28A0A075B6P5 120 aa16.09■□□□□ 0.17
SNF8-202ENST00000502492 IGKV2D-28P01615 120 aa16.09■□□□□ 0.17
SNF8-202ENST00000502492 LINC00337Q8N6G1 96 aa16.09■□□□□ 0.17
SNF8-202ENST00000502492 TTC32Q5I0X7 151 aa16.08■□□□□ 0.17
SNF8-202ENST00000502492 SND1-IT1Q9HBX3 110 aa16.08■□□□□ 0.17
SNF8-202ENST00000502492 CRPP02741 224 aa16.08■□□□□ 0.16
SNF8-202ENST00000502492 KIR2DL5BQ8NHK3 375 aa16.07■□□□□ 0.16
SNF8-202ENST00000502492 ACYP1P07311 99 aa16.07■□□□□ 0.16
SNF8-202ENST00000502492 BAALC-AS2P0C853 105 aa16.07■□□□□ 0.16
SNF8-202ENST00000502492 LINC00612Q8N6U2 182 aa16.07■□□□□ 0.16
SNF8-202ENST00000502492 C22orf24Q9Y442 160 aa16.06■□□□□ 0.16
SNF8-202ENST00000502492 IBA57-AS1B1ANH7 110 aa16.06■□□□□ 0.16
SNF8-202ENST00000502492 LINC00158P58513 81 aa16.06■□□□□ 0.16
SNF8-202ENST00000502492 LINC00959A0A1B0GUT2 108 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms