RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ATP6V1G1O75348 118 aa10.11□□□□□ -0.79
CPNE1-228ENST00000498814 CDK2AP2O75956 126 aa10.11□□□□□ -0.79
CPNE1-228ENST00000498814 MALP21145 153 aa10.11□□□□□ -0.79
CPNE1-228ENST00000498814 CNBPP62633 177 aaKnown RBP10.11□□□□□ -0.79
CPNE1-228ENST00000498814 FAM19A3Q7Z5A8 133 aa10.11□□□□□ -0.79
CPNE1-228ENST00000498814 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
CPNE1-228ENST00000498814 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
CPNE1-228ENST00000498814 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.1□□□□□ -0.79
CPNE1-228ENST00000498814 PMCHL1Q16048 86 aa10.1□□□□□ -0.79
CPNE1-228ENST00000498814 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
CPNE1-228ENST00000498814 PDZD11Q5EBL8 140 aa10.1□□□□□ -0.79
CPNE1-228ENST00000498814 APOMO95445 188 aa10.09□□□□□ -0.79
CPNE1-228ENST00000498814 SLPIP03973 132 aa10.09□□□□□ -0.79
CPNE1-228ENST00000498814 COX6A2Q02221 97 aa10.09□□□□□ -0.79
CPNE1-228ENST00000498814 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
CPNE1-228ENST00000498814 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-228ENST00000498814 SEC11AP67812 179 aa10.08□□□□□ -0.8
CPNE1-228ENST00000498814 PMVKQ15126 192 aa10.08□□□□□ -0.8
CPNE1-228ENST00000498814 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
CPNE1-228ENST00000498814 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
CPNE1-228ENST00000498814 A0A087WZ39 114 aa10.07□□□□□ -0.8
CPNE1-228ENST00000498814 ATP5LO75964 103 aa10.07□□□□□ -0.8
CPNE1-228ENST00000498814 RYR1P21817 5038 aa10.07□□□□□ -0.8
CPNE1-228ENST00000498814 ZNF561-AS1K7EIQ3 104 aa10.06□□□□□ -0.8
CPNE1-228ENST00000498814 HSBP1O75506 76 aa10.06□□□□□ -0.8
CPNE1-228ENST00000498814 HERVK_113P63121 156 aa10.06□□□□□ -0.8
CPNE1-228ENST00000498814 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
CPNE1-228ENST00000498814 OR10D4PQ8NGN7 298 aa10.06□□□□□ -0.8
CPNE1-228ENST00000498814 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
CPNE1-228ENST00000498814 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
CPNE1-228ENST00000498814 A0A0J9YXV3 536 aa10.05□□□□□ -0.8
CPNE1-228ENST00000498814 SERF1AO75920 110 aa10.05□□□□□ -0.8
CPNE1-228ENST00000498814 LINC00310P59036 64 aa10.05□□□□□ -0.8
CPNE1-228ENST00000498814 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
CPNE1-228ENST00000498814 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
CPNE1-228ENST00000498814 Q6ZSA8 131 aa10.04□□□□□ -0.8
CPNE1-228ENST00000498814 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
CPNE1-228ENST00000498814 GEMIN7Q9H840 131 aaKnown RBP10.04□□□□□ -0.8
CPNE1-228ENST00000498814 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BKO60814 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BJP06899 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BOP23527 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BBP33778 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 XGP55808 180 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BDP58876 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BCP62807 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST2H2BEQ16778 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.03□□□□□ -0.8
CPNE1-228ENST00000498814 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 ORAOV1Q8WV07 137 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BHQ93079 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BNQ99877 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 HIST1H2BMQ99879 126 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 DNAH8Q96JB1 4490 aa10.03□□□□□ -0.8
CPNE1-228ENST00000498814 NDUFA6P56556 154 aa10.02□□□□□ -0.81
CPNE1-228ENST00000498814 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
CPNE1-228ENST00000498814 SYCNQ0VAF6 134 aa10.02□□□□□ -0.81
CPNE1-228ENST00000498814 CDKN2A-AS1Q9UH64 79 aa10.02□□□□□ -0.81
CPNE1-228ENST00000498814 HERC2O95714 4834 aa10.02□□□□□ -0.81
CPNE1-228ENST00000498814 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
CPNE1-228ENST00000498814 F8WDY8 70 aa10.01□□□□□ -0.81
CPNE1-228ENST00000498814 NUPR1O60356 82 aa10.01□□□□□ -0.81
CPNE1-228ENST00000498814 CARD19Q96LW7 228 aa10.01□□□□□ -0.81
CPNE1-228ENST00000498814 KIAA0087Q14695 138 aa10□□□□□ -0.81
CPNE1-228ENST00000498814 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
CPNE1-228ENST00000498814 CAMK2N2Q96S95 79 aa10□□□□□ -0.81
CPNE1-228ENST00000498814 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
CPNE1-228ENST00000498814 LINC00469Q8N7U9 141 aa9.99□□□□□ -0.81
CPNE1-228ENST00000498814 HSPG2P98160 4391 aa9.99□□□□□ -0.81
CPNE1-228ENST00000498814 TRAV12-1A0A0B4J245 112 aa9.98□□□□□ -0.81
CPNE1-228ENST00000498814 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
CPNE1-228ENST00000498814 Q6ZRU5 148 aa9.98□□□□□ -0.81
CPNE1-228ENST00000498814 PACRGQ96M98 296 aaPredicted RBP9.98□□□□□ -0.81
CPNE1-228ENST00000498814 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
CPNE1-228ENST00000498814 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
CPNE1-228ENST00000498814 SMIM1B2RUZ4 78 aa9.96□□□□□ -0.82
CPNE1-228ENST00000498814 NDUFA1O15239 70 aa9.96□□□□□ -0.82
CPNE1-228ENST00000498814 RNF151Q2KHN1 245 aa9.96□□□□□ -0.82
CPNE1-228ENST00000498814 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
CPNE1-228ENST00000498814 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
CPNE1-228ENST00000498814 H3BRM9 83 aa9.95□□□□□ -0.82
CPNE1-228ENST00000498814 HAMPP81172 84 aa9.95□□□□□ -0.82
CPNE1-228ENST00000498814 CIRBPQ14011 172 aaKnown RBP9.95□□□□□ -0.82
CPNE1-228ENST00000498814 Q8IZM0 81 aa9.95□□□□□ -0.82
CPNE1-228ENST00000498814 HSPB8Q9UJY1 196 aa9.95□□□□□ -0.82
CPNE1-228ENST00000498814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.95□□□□□ -0.82
CPNE1-228ENST00000498814 PANO1I0J062 215 aa9.94□□□□□ -0.82
CPNE1-228ENST00000498814 PRSS2P07478 247 aa9.94□□□□□ -0.82
CPNE1-228ENST00000498814 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
CPNE1-228ENST00000498814 COA6Q5JTJ3 125 aaKnown RBP9.94□□□□□ -0.82
CPNE1-228ENST00000498814 UNQ6190/PRO20217Q6UXQ8 127 aa9.94□□□□□ -0.82
CPNE1-228ENST00000498814 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
CPNE1-228ENST00000498814 TOMM7Q9P0U1 55 aa9.94□□□□□ -0.82
CPNE1-228ENST00000498814 C11orf86A6NJI1 115 aa9.93□□□□□ -0.82
CPNE1-228ENST00000498814 FABP4P15090 132 aa9.93□□□□□ -0.82
CPNE1-228ENST00000498814 C6orf226Q5I0X4 101 aa9.93□□□□□ -0.82
CPNE1-228ENST00000498814 C10orf25Q5T742 122 aa9.93□□□□□ -0.82
CPNE1-228ENST00000498814 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms