RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 NDUFB11Q9NX14 153 aa1.97□□□□□ -2.09
CSTF1-207ENST00000498689 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
CSTF1-207ENST00000498689 APCSP02743 223 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 BAXQ07812 192 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 UBE2NLQ5JXB2 153 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 SPANXN2Q5MJ10 180 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 MZT2AQ6P582 158 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 NIT2Q9NQR4 276 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 RBM12B-AS1Q9P1G2 102 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 MBD2Q9UBB5 411 aa1.96□□□□□ -2.1
CSTF1-207ENST00000498689 IGLV5-37A0A075B6J1 123 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 IGHV3OR16-9A0A0B4J2B5 98 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 H7C2G1 150 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 NCS1P62166 190 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 C9orf153Q5TBE3 101 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 SAMD12Q8N8I0 201 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 SMCR5Q8TEV8 140 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 LIMD2Q9BT23 127 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 GGACTQ9BVM4 153 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 KCNIP3Q9Y2W7 256 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
CSTF1-207ENST00000498689 CIB2O75838 187 aa1.94□□□□□ -2.1
CSTF1-207ENST00000498689 SMIM17P0DL12 118 aa1.94□□□□□ -2.1
CSTF1-207ENST00000498689 DEFA1P59665 94 aa1.94□□□□□ -2.1
CSTF1-207ENST00000498689 Q1RN00 199 aa1.94□□□□□ -2.1
CSTF1-207ENST00000498689 C9orf16Q9BUW7 83 aa1.94□□□□□ -2.1
CSTF1-207ENST00000498689 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
CSTF1-207ENST00000498689 C9orf170A2RU37 121 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 L7N2F9 121 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 RAB3DO95716 219 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 VAMP2P63027 116 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 FAM74A1Q5RGS3 127 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 SPANXN1Q5VSR9 72 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 C1orf146Q5VVC0 180 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 NKAPP1Q8N9T2 125 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 RPL39LQ96EH5 51 aaKnown RBP1.93□□□□□ -2.1
CSTF1-207ENST00000498689 NPCDR1Q9BY65 106 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
CSTF1-207ENST00000498689 C7orf66A4D0T2 115 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 SNAI2O43623 268 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 NCR2O95944 276 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 AQP4P55087 323 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 DNAL1Q4LDG9 190 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 SAPCD1Q5SSQ6 148 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 Q6ZUT4 128 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 NOTCH2NLQ7Z3S9 236 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 MRPL52Q86TS9 123 aaKnown RBP1.92□□□□□ -2.1
CSTF1-207ENST00000498689 C8orf59Q8N0T1 100 aaPredicted RBP1.92□□□□□ -2.1
CSTF1-207ENST00000498689 AP1S3Q96PC3 154 aa1.92□□□□□ -2.1
CSTF1-207ENST00000498689 RNASE7Q9H1E1 156 aaKnown RBP1.92□□□□□ -2.1
CSTF1-207ENST00000498689 hCG_2014768A0A024R1R8 64 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 SCGB1D2O95969 90 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 MT1XP80297 61 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 SMIM29Q86T20 159 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 GATD1Q8NB37 220 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 TMEM229BQ8NBD8 167 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 NUDT15Q9NV35 164 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 NDUFA13Q9P0J0 144 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 GSKIPQ9P0R6 139 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 MTFP1Q9UDX5 166 aa1.91□□□□□ -2.1
CSTF1-207ENST00000498689 SERTM2A0A1B0GWG4 89 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 HMGB3O15347 200 aaKnown RBP1.9□□□□□ -2.11
CSTF1-207ENST00000498689 ANXA3P12429 323 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 KHDC3LQ587J8 217 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 C10orf91Q5T1B1 145 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 C5orf17Q8NAS9 161 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 THAP6Q8TBB0 222 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 AP3S1Q92572 193 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 FAM104AQ969W3 186 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 FUNDC2Q9BWH2 189 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 S100A14Q9HCY8 104 aa1.9□□□□□ -2.11
CSTF1-207ENST00000498689 RAB19A4D1S5 217 aa1.89□□□□□ -2.11
CSTF1-207ENST00000498689 CNPY1Q3B7I2 92 aa1.89□□□□□ -2.11
CSTF1-207ENST00000498689 AKAP14Q86UN6 197 aa1.89□□□□□ -2.11
CSTF1-207ENST00000498689 MRAP2Q96G30 205 aa1.89□□□□□ -2.11
CSTF1-207ENST00000498689 EPDR1Q9UM22 224 aa1.89□□□□□ -2.11
CSTF1-207ENST00000498689 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
CSTF1-207ENST00000498689 SDHAF1A6NFY7 115 aa1.88□□□□□ -2.11
CSTF1-207ENST00000498689 CTDSP2O14595 271 aa1.88□□□□□ -2.11
CSTF1-207ENST00000498689 TAS2R30P59541 319 aa1.88□□□□□ -2.11
CSTF1-207ENST00000498689 IGSF23A1L1A6 192 aa1.87□□□□□ -2.11
CSTF1-207ENST00000498689 DISC1C4P0D8 188 aa1.87□□□□□ -2.11
CSTF1-207ENST00000498689 ATP5HO75947 161 aa1.87□□□□□ -2.11
CSTF1-207ENST00000498689 VPREB1P12018 145 aa1.87□□□□□ -2.11
CSTF1-207ENST00000498689 PMCHP20382 165 aa1.87□□□□□ -2.11
CSTF1-207ENST00000498689 PYGO1Q9Y3Y4 419 aa1.87□□□□□ -2.11
CSTF1-207ENST00000498689 I3L3M4 83 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 HPGDSO60760 199 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 BCAP31P51572 246 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 COX8CQ7Z4L0 72 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 PCP2Q8IVA1 136 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 Q96NJ1 140 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 TOMM7Q9P0U1 55 aa1.86□□□□□ -2.11
CSTF1-207ENST00000498689 SMIM31A0A1B0GVY4 71 aa1.85□□□□□ -2.11
CSTF1-207ENST00000498689 A0A1W2PNM2 257 aa1.85□□□□□ -2.11
CSTF1-207ENST00000498689 C7orf77A4D0Y5 90 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms