RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ALKBH7Q9BT30 221 aaPredicted RBP7.3□□□□□ -1.24
ERCC8-208ENST00000497892 PYGO1Q9Y3Y4 419 aa7.3□□□□□ -1.24
ERCC8-208ENST00000497892 C1orf196B1AJZ1 125 aa7.29□□□□□ -1.24
ERCC8-208ENST00000497892 CNBPP62633 177 aaKnown RBP7.29□□□□□ -1.24
ERCC8-208ENST00000497892 CFAP161Q6P656 301 aa7.29□□□□□ -1.24
ERCC8-208ENST00000497892 CD164L2Q6UWJ8 174 aa7.29□□□□□ -1.24
ERCC8-208ENST00000497892 SLC7A5P1Q8MH63 180 aa7.29□□□□□ -1.24
ERCC8-208ENST00000497892 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
ERCC8-208ENST00000497892 CYSLTR1Q9Y271 337 aa7.29□□□□□ -1.24
ERCC8-208ENST00000497892 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
ERCC8-208ENST00000497892 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
ERCC8-208ENST00000497892 C2orf66Q6UXQ4 117 aa7.28□□□□□ -1.24
ERCC8-208ENST00000497892 C9orf163Q8N9P6 203 aa7.28□□□□□ -1.24
ERCC8-208ENST00000497892 YPEL4Q96NS1 127 aa7.28□□□□□ -1.24
ERCC8-208ENST00000497892 OPRPNQ99935 248 aaPredicted RBP7.28□□□□□ -1.24
ERCC8-208ENST00000497892 FAM30AQ9NZY2 134 aa7.28□□□□□ -1.24
ERCC8-208ENST00000497892 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
ERCC8-208ENST00000497892 IGLV4-3A0A075B6K6 122 aa7.27□□□□□ -1.25
ERCC8-208ENST00000497892 FABP9Q0Z7S8 132 aa7.27□□□□□ -1.25
ERCC8-208ENST00000497892 Q8N1X5 172 aa7.27□□□□□ -1.25
ERCC8-208ENST00000497892 IGHV1-58A0A0C4DH39 117 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 IFITM10A6NMD0 228 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 SLPIP03973 132 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 NPSP0C0P6 89 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 G0S2P27469 103 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 HAMPP81172 84 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 HIGD2BQ4VC39 106 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 PRSS3P2Q8NHM4 247 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 TRAPPC1Q9Y5R8 145 aa7.26□□□□□ -1.25
ERCC8-208ENST00000497892 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.25□□□□□ -1.25
ERCC8-208ENST00000497892 IGIPA6NJ69 53 aa7.25□□□□□ -1.25
ERCC8-208ENST00000497892 COX7A2LO14548 114 aa7.25□□□□□ -1.25
ERCC8-208ENST00000497892 CBLN2Q8IUK8 224 aa7.25□□□□□ -1.25
ERCC8-208ENST00000497892 Q6ZN92 141 aa7.24□□□□□ -1.25
ERCC8-208ENST00000497892 TEX43Q6ZNM6 134 aa7.24□□□□□ -1.25
ERCC8-208ENST00000497892 LINC00173Q6ZV60 143 aa7.24□□□□□ -1.25
ERCC8-208ENST00000497892 TOMM6Q96B49 74 aa7.24□□□□□ -1.25
ERCC8-208ENST00000497892 SMCO4Q9NRQ5 59 aa7.24□□□□□ -1.25
ERCC8-208ENST00000497892 PCLOQ9Y6V0 5065 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 IGHV3OR16-9A0A0B4J2B5 98 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 MALP21145 153 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 SDIM1Q6ZPB5 146 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 FA2HQ7L5A8 372 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 SCXQ7RTU7 201 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 AMELXQ99217 191 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 TIMM17AQ99595 171 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 C2orf88Q9BSF0 95 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
ERCC8-208ENST00000497892 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 IGHV3-64A0A075B6Q5 118 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 LINC01549A6NIU2 74 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 UBE2D1P51668 147 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 LINC00242Q5T6M2 205 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 ERASQ7Z444 233 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
ERCC8-208ENST00000497892 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 APOMO95445 188 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 ZC2HC1BQ5TFG8 222 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 LINC00526Q96FQ7 95 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 URB1-AS1Q96HZ7 61 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 VCX2Q9H322 139 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 FAT1Q14517 4588 aa7.21□□□□□ -1.26
ERCC8-208ENST00000497892 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
ERCC8-208ENST00000497892 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
ERCC8-208ENST00000497892 CIRBPQ14011 172 aaKnown RBP7.2□□□□□ -1.26
ERCC8-208ENST00000497892 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
ERCC8-208ENST00000497892 OR10D4PQ8NGN7 298 aa7.2□□□□□ -1.26
ERCC8-208ENST00000497892 CIRBP-AS1Q8TBR5 109 aa7.2□□□□□ -1.26
ERCC8-208ENST00000497892 CARD19Q96LW7 228 aa7.2□□□□□ -1.26
ERCC8-208ENST00000497892 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
ERCC8-208ENST00000497892 IGLV4-69A0A075B6H9 119 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 A0A087WZ39 114 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 A0A096LNJ9 63 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 PANO1I0J062 215 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 COX6A2Q02221 97 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 SPAG11BQ08648 103 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 SYCNQ0VAF6 134 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 Q5VSD8 79 aa7.19□□□□□ -1.26
ERCC8-208ENST00000497892 LINC00614P0C842 121 aa7.18□□□□□ -1.26
ERCC8-208ENST00000497892 SPACA4Q8TDM5 124 aa7.18□□□□□ -1.26
ERCC8-208ENST00000497892 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
ERCC8-208ENST00000497892 C2orf48Q96LS8 159 aa7.18□□□□□ -1.26
ERCC8-208ENST00000497892 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
ERCC8-208ENST00000497892 RAB5BP61020 215 aa7.17□□□□□ -1.26
ERCC8-208ENST00000497892 Q6ZRU5 148 aa7.17□□□□□ -1.26
ERCC8-208ENST00000497892 LINC01561Q8N1V8 128 aa7.17□□□□□ -1.26
ERCC8-208ENST00000497892 CAMK2N2Q96S95 79 aa7.17□□□□□ -1.26
ERCC8-208ENST00000497892 PKIGQ9Y2B9 76 aa7.17□□□□□ -1.26
ERCC8-208ENST00000497892 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
ERCC8-208ENST00000497892 HBDP02042 147 aa7.16□□□□□ -1.26
ERCC8-208ENST00000497892 HERVK_113P63121 156 aa7.16□□□□□ -1.26
ERCC8-208ENST00000497892 SEC11AP67812 179 aa7.16□□□□□ -1.26
ERCC8-208ENST00000497892 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
ERCC8-208ENST00000497892 A0A096LNI7 61 aa7.15□□□□□ -1.26
ERCC8-208ENST00000497892 F8WDY8 70 aa7.15□□□□□ -1.26
ERCC8-208ENST00000497892 TRGC2P03986 189 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms