RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CD164L2Q6UWJ8 174 aa13.26□□□□□ -0.29
CTSD-206ENST00000497544 LINC00173Q6ZV60 143 aa13.26□□□□□ -0.29
CTSD-206ENST00000497544 A0A087WTM6 91 aa13.25□□□□□ -0.29
CTSD-206ENST00000497544 LEPROTL1O95214 131 aa13.25□□□□□ -0.29
CTSD-206ENST00000497544 PMVKQ15126 192 aa13.25□□□□□ -0.29
CTSD-206ENST00000497544 COA6Q5JTJ3 125 aaKnown RBP13.25□□□□□ -0.29
CTSD-206ENST00000497544 IFI27L1Q96BM0 104 aa13.25□□□□□ -0.29
CTSD-206ENST00000497544 APOBP04114 4563 aaKnown RBP13.24□□□□□ -0.29
CTSD-206ENST00000497544 LRCOL1A6NCL2 159 aa13.24□□□□□ -0.29
CTSD-206ENST00000497544 PRSS1P07477 247 aa13.24□□□□□ -0.29
CTSD-206ENST00000497544 UBE2D1P51668 147 aa13.24□□□□□ -0.29
CTSD-206ENST00000497544 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
CTSD-206ENST00000497544 LECT2O14960 151 aa13.23□□□□□ -0.29
CTSD-206ENST00000497544 FABP4P15090 132 aa13.23□□□□□ -0.29
CTSD-206ENST00000497544 FOXI1Q12951 378 aa13.23□□□□□ -0.29
CTSD-206ENST00000497544 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
CTSD-206ENST00000497544 SEC11AP67812 179 aa13.22□□□□□ -0.29
CTSD-206ENST00000497544 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
CTSD-206ENST00000497544 CFAP161Q6P656 301 aa13.22□□□□□ -0.29
CTSD-206ENST00000497544 HSPB8Q9UJY1 196 aa13.22□□□□□ -0.29
CTSD-206ENST00000497544 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
CTSD-206ENST00000497544 COX7A2LO14548 114 aa13.2□□□□□ -0.3
CTSD-206ENST00000497544 S100A6P06703 90 aa13.2□□□□□ -0.3
CTSD-206ENST00000497544 MALP21145 153 aa13.2□□□□□ -0.3
CTSD-206ENST00000497544 WFDC2Q14508 124 aa13.2□□□□□ -0.3
CTSD-206ENST00000497544 C14orf177Q52M58 125 aa13.2□□□□□ -0.3
CTSD-206ENST00000497544 C5orf38Q86SI9 138 aa13.2□□□□□ -0.3
CTSD-206ENST00000497544 GEMIN7Q9H840 131 aaKnown RBP13.2□□□□□ -0.3
CTSD-206ENST00000497544 COX6A2Q02221 97 aa13.19□□□□□ -0.3
CTSD-206ENST00000497544 FAM19A3Q7Z5A8 133 aa13.19□□□□□ -0.3
CTSD-206ENST00000497544 IGHV3OR16-9A0A0B4J2B5 98 aa13.18□□□□□ -0.3
CTSD-206ENST00000497544 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
CTSD-206ENST00000497544 HERVK_113P63121 156 aa13.18□□□□□ -0.3
CTSD-206ENST00000497544 Q8N1X5 172 aa13.18□□□□□ -0.3
CTSD-206ENST00000497544 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
CTSD-206ENST00000497544 Q8N814 137 aa13.17□□□□□ -0.3
CTSD-206ENST00000497544 IGHV1-58A0A0C4DH39 117 aa13.16□□□□□ -0.3
CTSD-206ENST00000497544 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
CTSD-206ENST00000497544 APOMO95445 188 aa13.16□□□□□ -0.3
CTSD-206ENST00000497544 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
CTSD-206ENST00000497544 TRAV12-1A0A0B4J245 112 aa13.15□□□□□ -0.3
CTSD-206ENST00000497544 H0Y8G0 127 aa13.15□□□□□ -0.3
CTSD-206ENST00000497544 MAP1LC3CQ9BXW4 147 aa13.15□□□□□ -0.3
CTSD-206ENST00000497544 CHTOPQ9Y3Y2 248 aaKnown RBP13.15□□□□□ -0.3
CTSD-206ENST00000497544 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
CTSD-206ENST00000497544 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
CTSD-206ENST00000497544 A0A087WZ39 114 aa13.13□□□□□ -0.31
CTSD-206ENST00000497544 hDV102S1A0JD36 115 aa13.13□□□□□ -0.31
CTSD-206ENST00000497544 LINC00469Q8N7U9 141 aa13.13□□□□□ -0.31
CTSD-206ENST00000497544 C15orf56Q8N910 161 aa13.13□□□□□ -0.31
CTSD-206ENST00000497544 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
CTSD-206ENST00000497544 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
CTSD-206ENST00000497544 S100A2P29034 98 aa13.12□□□□□ -0.31
CTSD-206ENST00000497544 HIGD2BQ4VC39 106 aa13.12□□□□□ -0.31
CTSD-206ENST00000497544 CDKN2A-AS1Q9UH64 79 aa13.12□□□□□ -0.31
CTSD-206ENST00000497544 LINC01561Q8N1V8 128 aa13.11□□□□□ -0.31
CTSD-206ENST00000497544 CHAC1Q9BUX1 264 aa13.11□□□□□ -0.31
CTSD-206ENST00000497544 IGLV4-69A0A075B6H9 119 aa13.1□□□□□ -0.31
CTSD-206ENST00000497544 ZNF561-AS1K7EIQ3 104 aa13.1□□□□□ -0.31
CTSD-206ENST00000497544 NTN5Q8WTR8 489 aaPredicted RBP13.1□□□□□ -0.31
CTSD-206ENST00000497544 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
CTSD-206ENST00000497544 F8VRH5 84 aa13.09□□□□□ -0.31
CTSD-206ENST00000497544 KRTAP10-2P60368 255 aa13.09□□□□□ -0.31
CTSD-206ENST00000497544 SNRPEP62304 92 aaKnown RBP13.09□□□□□ -0.31
CTSD-206ENST00000497544 HIST3H2BBQ8N257 126 aa13.09□□□□□ -0.31
CTSD-206ENST00000497544 ORAOV1Q8WV07 137 aa13.09□□□□□ -0.31
CTSD-206ENST00000497544 MRPL35Q9NZE8 188 aaKnown RBP13.09□□□□□ -0.31
CTSD-206ENST00000497544 IGLV5-45A0A087WSX0 123 aa13.08□□□□□ -0.32
CTSD-206ENST00000497544 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.32
CTSD-206ENST00000497544 IGLV5-52A0A0A0MRZ9 124 aa13.08□□□□□ -0.32
CTSD-206ENST00000497544 H3BRM9 83 aa13.08□□□□□ -0.32
CTSD-206ENST00000497544 FUSP35637 526 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTSD-206ENST00000497544 ODF1Q14990 250 aa13.08□□□□□ -0.32
CTSD-206ENST00000497544 C11orf86A6NJI1 115 aa13.07□□□□□ -0.32
CTSD-206ENST00000497544 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
CTSD-206ENST00000497544 OR10D4PQ8NGN7 298 aa13.07□□□□□ -0.32
CTSD-206ENST00000497544 SYS1-DBNDD2H3BUS1 97 aa13.06□□□□□ -0.32
CTSD-206ENST00000497544 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
CTSD-206ENST00000497544 LINC00526Q96FQ7 95 aa13.06□□□□□ -0.32
CTSD-206ENST00000497544 DNAH5Q8TE73 4624 aa13.05□□□□□ -0.32
CTSD-206ENST00000497544 ZNF22P17026 224 aaPredicted RBP13.05□□□□□ -0.32
CTSD-206ENST00000497544 KRTDAPP60985 99 aa13.05□□□□□ -0.32
CTSD-206ENST00000497544 SPAG11BQ08648 103 aa13.05□□□□□ -0.32
CTSD-206ENST00000497544 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
CTSD-206ENST00000497544 C5orf52A6NGY3 159 aa13.04□□□□□ -0.32
CTSD-206ENST00000497544 C3orf79P0CE67 100 aa13.04□□□□□ -0.32
CTSD-206ENST00000497544 PET117Q6UWS5 81 aa13.04□□□□□ -0.32
CTSD-206ENST00000497544 PMCHL2Q9BQD1 86 aa13.04□□□□□ -0.32
CTSD-206ENST00000497544 TOMM7Q9P0U1 55 aa13.04□□□□□ -0.32
CTSD-206ENST00000497544 MYCBP2O75592 4640 aa13.04□□□□□ -0.32
CTSD-206ENST00000497544 C16orf90A8MZG2 172 aa13.03□□□□□ -0.32
CTSD-206ENST00000497544 PRSS2P07478 247 aa13.03□□□□□ -0.32
CTSD-206ENST00000497544 SPINK8P0C7L1 97 aa13.03□□□□□ -0.32
CTSD-206ENST00000497544 HIST1H2BLQ99880 126 aa13.03□□□□□ -0.32
CTSD-206ENST00000497544 SMIM1B2RUZ4 78 aa13.02□□□□□ -0.33
CTSD-206ENST00000497544 DPM2O94777 84 aa13.02□□□□□ -0.33
CTSD-206ENST00000497544 PLNP26678 52 aa13.02□□□□□ -0.33
CTSD-206ENST00000497544 CNBPP62633 177 aaKnown RBP13.02□□□□□ -0.33
CTSD-206ENST00000497544 C2orf48Q96LS8 159 aa13.02□□□□□ -0.33
CTSD-206ENST00000497544 SLPIP03973 132 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms