RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 TAS2R4Q9NYW5 299 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 SERP1Q9Y6X1 66 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 CACNA1CQ13936 2221 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 MPDZO75970 2070 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 CCDC168Q8NDH2 2452 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 POLQO75417 2590 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 ASH1LQ9NR48 2969 aaKnown RBP2.68□□□□□ -1.98
SF3B1-212ENST00000496458 IGKV1OR2-108A0A075B7D4 117 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 TRAV17A0A0B4J275 112 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 A8MUU9 505 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 C19orf84I3L1E1 186 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 LEPROTO15243 131 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 MGST1P10620 155 aaKnown RBP2.68□□□□□ -1.98
SF3B1-212ENST00000496458 S100A4P26447 101 aaKnown RBP2.68□□□□□ -1.98
SF3B1-212ENST00000496458 HIST1H4AP62805 103 aaKnown RBP2.68□□□□□ -1.98
SF3B1-212ENST00000496458 DEFB109BQ30KR1 87 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 LINC01554Q52M75 96 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 BRD3OSQ6XYD6 125 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 SDIM1Q6ZPB5 146 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 C5orf38Q86SI9 138 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 DCANP1Q8TF63 244 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 OTORQ9NRC9 128 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 ICOSQ9Y6W8 199 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 CACNA1DQ01668 2161 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 INTS1Q8N201 2190 aaKnown RBP2.68□□□□□ -1.98
SF3B1-212ENST00000496458 TEX15Q9BXT5 2789 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 CELSR2Q9HCU4 2923 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 UNC79Q9P2D8 2635 aa2.68□□□□□ -1.98
SF3B1-212ENST00000496458 ANKHD1Q8IWZ3 2542 aaKnown RBP2.68□□□□□ -1.98
SF3B1-212ENST00000496458 LRBAP50851 2863 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 SHANK1Q9Y566 2161 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 RELNP78509 3460 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 BSNQ9UPA5 3926 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 TRBV7-3A0A075B6L6 115 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 TRBV25-1A0A075B6N4 114 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 TRGV5A0A0B4J1U4 118 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 IGKV1-9A0A0C4DH69 117 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 K7ERJ3 54 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 IFI6P09912 130 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 SLC25A16P16260 332 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 SSR2P43308 183 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 UBE2L3P68036 154 aaKnown RBP2.67□□□□□ -1.98
SF3B1-212ENST00000496458 HBBP68871 147 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 CCL8P80075 99 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 RPL18Q07020 188 aaKnown RBP2.67□□□□□ -1.98
SF3B1-212ENST00000496458 KIAA2026Q5HYC2 2103 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 LINC00643Q86TS7 51 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 LINC00311Q8N616 119 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 IFI27L1Q96BM0 104 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 TRGV9Q99603 122 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 TTTY10Q9BZA0 68 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 DPH3P1Q9H4G8 78 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 DCHS2Q6V1P9 2916 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 ALPK2Q86TB3 2170 aa2.67□□□□□ -1.98
SF3B1-212ENST00000496458 TRBV7-6A0A0J9YX20 115 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 C19orf71A6NCJ1 209 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 H3BT86 120 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 SYNGR2O43760 224 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 TCL1BO95988 128 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 IGHV1-69P01742 117 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 UBE2D1P51668 147 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 FXYD7P58549 80 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 NPC2P61916 151 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 UBE2BP63146 152 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 ZNF816Q0VGE8 651 aaPredicted RBP2.66□□□□□ -1.98
SF3B1-212ENST00000496458 DEFB134Q4QY38 66 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 C3orf56Q8N813 242 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 CNEP1R1Q8N9A8 125 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 PFN4Q8NHR9 129 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 ARHGAP5-AS1Q96IT6 56 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 TTTY13Q9BZ97 58 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 C16orf95Q9H693 158 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 PSENENQ9NZ42 101 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 EPDR1Q9UM22 224 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 LHFPL6Q9Y693 200 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 R4GMQ9 66 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 U3KQK5 164 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 ADGRG4Q8IZF6 3080 aa2.66□□□□□ -1.98
SF3B1-212ENST00000496458 EXPH5Q8NEV8 1989 aa2.65□□□□□ -1.98
SF3B1-212ENST00000496458 MTORP42345 2549 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 A0A0B4J2C4 111 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 TRBV10-2A0A0K0K1G8 114 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 hADV29S1A0JD25 119 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 TMEM256-PLSCR3K7ERE1 68 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 LYZL6O75951 148 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 LY6HO94772 140 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 PRB1P04280 392 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 EFNA4P52798 201 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 GDF5OSQ5U4N7 250 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 MUC7Q8TAX7 377 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 NXT2Q9NPJ8 142 aaKnown RBP2.65□□□□□ -1.99
SF3B1-212ENST00000496458 TMEM167BQ9NRX6 74 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 S4R3C0 116 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 PRR14LQ5THK1 2151 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 MALRD1Q5VYJ5 2156 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 TEP1Q99973 2627 aaKnown RBP2.65□□□□□ -1.99
SF3B1-212ENST00000496458 MYO9AB2RTY4 2548 aa2.65□□□□□ -1.99
SF3B1-212ENST00000496458 SPENQ96T58 3664 aaKnown RBP2.64□□□□□ -1.99
SF3B1-212ENST00000496458 ANKRD17O75179 2603 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms