RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 COX11Q9Y6N1 276 aa8.89□□□□□ -0.99
PTPN7-218ENST00000496197 H0Y8G0 127 aa8.88□□□□□ -0.99
PTPN7-218ENST00000496197 PRSS1P07477 247 aa8.88□□□□□ -0.99
PTPN7-218ENST00000496197 FUSP35637 526 aaKnown RBP eCLIP8.88□□□□□ -0.99
PTPN7-218ENST00000496197 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
PTPN7-218ENST00000496197 C5orf38Q86SI9 138 aa8.88□□□□□ -0.99
PTPN7-218ENST00000496197 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
PTPN7-218ENST00000496197 C5orf52A6NGY3 159 aa8.87□□□□□ -0.99
PTPN7-218ENST00000496197 USP17L23D6RBM5 183 aa8.87□□□□□ -0.99
PTPN7-218ENST00000496197 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
PTPN7-218ENST00000496197 PKD1P98161 4303 aa8.86□□□□□ -0.99
PTPN7-218ENST00000496197 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
PTPN7-218ENST00000496197 S100A6P06703 90 aa8.86□□□□□ -0.99
PTPN7-218ENST00000496197 HSPB8Q9UJY1 196 aa8.86□□□□□ -0.99
PTPN7-218ENST00000496197 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
PTPN7-218ENST00000496197 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
PTPN7-218ENST00000496197 ODF1Q14990 250 aa8.85□□□□□ -0.99
PTPN7-218ENST00000496197 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
PTPN7-218ENST00000496197 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
PTPN7-218ENST00000496197 CDKN2A-AS1Q9UH64 79 aa8.85□□□□□ -0.99
PTPN7-218ENST00000496197 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
PTPN7-218ENST00000496197 C11orf86A6NJI1 115 aa8.84□□□□□ -0.99
PTPN7-218ENST00000496197 PMCHL2Q9BQD1 86 aa8.84□□□□□ -0.99
PTPN7-218ENST00000496197 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
PTPN7-218ENST00000496197 CHTOPQ9Y3Y2 248 aaKnown RBP8.84□□□□□ -0.99
PTPN7-218ENST00000496197 DNAH11Q96DT5 4516 aa8.84□□□□□ -0.99
PTPN7-218ENST00000496197 IGLV5-45A0A087WSX0 123 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 COX7A2LO14548 114 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 C3orf79P0CE67 100 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 KRTAP10-2P60368 255 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 HIGD2BQ4VC39 106 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 Q8N814 137 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 PACRGQ96M98 296 aaPredicted RBP8.83□□□□□ -1
PTPN7-218ENST00000496197 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 A0A087WZ39 114 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 F8VRH5 84 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
PTPN7-218ENST00000496197 HERVK_113P63121 156 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 NTN5Q8WTR8 489 aaPredicted RBP8.83□□□□□ -1
PTPN7-218ENST00000496197 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
PTPN7-218ENST00000496197 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.82□□□□□ -1
PTPN7-218ENST00000496197 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
PTPN7-218ENST00000496197 GEMIN7Q9H840 131 aaKnown RBP8.82□□□□□ -1
PTPN7-218ENST00000496197 SLPIP03973 132 aa8.81□□□□□ -1
PTPN7-218ENST00000496197 SEC11AP67812 179 aa8.81□□□□□ -1
PTPN7-218ENST00000496197 EPPK1P58107 5090 aaKnown RBP8.8□□□□□ -1
PTPN7-218ENST00000496197 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
PTPN7-218ENST00000496197 IGHV1-58A0A0C4DH39 117 aa8.8□□□□□ -1
PTPN7-218ENST00000496197 SMIM1B2RUZ4 78 aa8.8□□□□□ -1
PTPN7-218ENST00000496197 MALP21145 153 aa8.8□□□□□ -1
PTPN7-218ENST00000496197 S100A2P29034 98 aa8.8□□□□□ -1
PTPN7-218ENST00000496197 KRTDAPP60985 99 aa8.8□□□□□ -1
PTPN7-218ENST00000496197 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
PTPN7-218ENST00000496197 IGHV3-64A0A075B6Q5 118 aa8.79□□□□□ -1
PTPN7-218ENST00000496197 hDV102S1A0JD36 115 aa8.79□□□□□ -1
PTPN7-218ENST00000496197 SPINK8P0C7L1 97 aa8.79□□□□□ -1
PTPN7-218ENST00000496197 KIAA0087Q14695 138 aa8.78□□□□□ -1
PTPN7-218ENST00000496197 LINC01545Q5VT33 79 aa8.78□□□□□ -1
PTPN7-218ENST00000496197 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
PTPN7-218ENST00000496197 SPAG11BQ08648 103 aa8.77□□□□□ -1
PTPN7-218ENST00000496197 TMEM170BQ5T4T1 132 aa8.77□□□□□ -1
PTPN7-218ENST00000496197 PET117Q6UWS5 81 aa8.77□□□□□ -1
PTPN7-218ENST00000496197 LINC01561Q8N1V8 128 aa8.77□□□□□ -1
PTPN7-218ENST00000496197 LINC01620Q4KN68 170 aa8.77□□□□□ -1.01
PTPN7-218ENST00000496197 CFAP161Q6P656 301 aa8.77□□□□□ -1.01
PTPN7-218ENST00000496197 EREGO14944 169 aa8.76□□□□□ -1.01
PTPN7-218ENST00000496197 DPM2O94777 84 aa8.76□□□□□ -1.01
PTPN7-218ENST00000496197 APOMO95445 188 aa8.76□□□□□ -1.01
PTPN7-218ENST00000496197 C14orf177Q52M58 125 aa8.76□□□□□ -1.01
PTPN7-218ENST00000496197 OR10D4PQ8NGN7 298 aa8.76□□□□□ -1.01
PTPN7-218ENST00000496197 DNAH5Q8TE73 4624 aa8.75□□□□□ -1.01
PTPN7-218ENST00000496197 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
PTPN7-218ENST00000496197 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
PTPN7-218ENST00000496197 IGKCP01834 107 aa8.75□□□□□ -1.01
PTPN7-218ENST00000496197 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
PTPN7-218ENST00000496197 BIRC6Q9NR09 4857 aa8.74□□□□□ -1.01
PTPN7-218ENST00000496197 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
PTPN7-218ENST00000496197 ZNF561-AS1K7EIQ3 104 aa8.74□□□□□ -1.01
PTPN7-218ENST00000496197 PLNP26678 52 aa8.74□□□□□ -1.01
PTPN7-218ENST00000496197 C10orf25Q5T742 122 aa8.74□□□□□ -1.01
PTPN7-218ENST00000496197 C2orf82Q6UX34 121 aa8.74□□□□□ -1.01
PTPN7-218ENST00000496197 IGLV5-52A0A0A0MRZ9 124 aa8.73□□□□□ -1.01
PTPN7-218ENST00000496197 H3BRM9 83 aa8.73□□□□□ -1.01
PTPN7-218ENST00000496197 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
PTPN7-218ENST00000496197 Q6ZRU5 148 aa8.73□□□□□ -1.01
PTPN7-218ENST00000496197 ATOH7Q8N100 152 aa8.73□□□□□ -1.01
PTPN7-218ENST00000496197 Q8IZM0 81 aa8.72□□□□□ -1.01
PTPN7-218ENST00000496197 COX7B2Q8TF08 81 aa8.72□□□□□ -1.01
PTPN7-218ENST00000496197 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.01
PTPN7-218ENST00000496197 CAMK2N2Q96S95 79 aa8.71□□□□□ -1.01
PTPN7-218ENST00000496197 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 SYCNQ0VAF6 134 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 STPG4Q8N801 248 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 C9orf163Q8N9P6 203 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms