RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 GVQW2A0A096LPI5 108 aaPredicted RBP7.87□□□□□ -1.15
CSNK1E-213ENST00000495232 CDK2AP2O75956 126 aa7.87□□□□□ -1.15
CSNK1E-213ENST00000495232 UBE2D1P51668 147 aa7.87□□□□□ -1.15
CSNK1E-213ENST00000495232 SEC11AP67812 179 aa7.87□□□□□ -1.15
CSNK1E-213ENST00000495232 ZC2HC1BQ5TFG8 222 aa7.87□□□□□ -1.15
CSNK1E-213ENST00000495232 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
CSNK1E-213ENST00000495232 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
CSNK1E-213ENST00000495232 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
CSNK1E-213ENST00000495232 PMCHL1Q16048 86 aa7.86□□□□□ -1.15
CSNK1E-213ENST00000495232 LINC01620Q4KN68 170 aa7.86□□□□□ -1.15
CSNK1E-213ENST00000495232 LINC00242Q5T6M2 205 aa7.86□□□□□ -1.15
CSNK1E-213ENST00000495232 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
CSNK1E-213ENST00000495232 HSBP1O75506 76 aa7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 ATP5LO75964 103 aa7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 NDUFA6P56556 154 aa7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 HERVK_113P63121 156 aa7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 PMVKQ15126 192 aa7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 C9orf163Q8N9P6 203 aa7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
CSNK1E-213ENST00000495232 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
CSNK1E-213ENST00000495232 ATP6V1G1O75348 118 aa7.84□□□□□ -1.15
CSNK1E-213ENST00000495232 COX6A2Q02221 97 aa7.84□□□□□ -1.15
CSNK1E-213ENST00000495232 OR10D4PQ8NGN7 298 aa7.84□□□□□ -1.15
CSNK1E-213ENST00000495232 ORAOV1Q8WV07 137 aa7.84□□□□□ -1.15
CSNK1E-213ENST00000495232 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
CSNK1E-213ENST00000495232 KIAA1109Q2LD37 5005 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 A0A087WZ39 114 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 A0A096LNJ9 63 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 SPAG11BQ08648 103 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 FAM19A3Q7Z5A8 133 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 LINC00526Q96FQ7 95 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 PACRGQ96M98 296 aaPredicted RBP7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 CST9LQ9H4G1 147 aa7.83□□□□□ -1.16
CSNK1E-213ENST00000495232 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 SLPIP03973 132 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 SYCNQ0VAF6 134 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 PDZD11Q5EBL8 140 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 LINC01561Q8N1V8 128 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 CARD19Q96LW7 228 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 CAMK2N2Q96S95 79 aa7.82□□□□□ -1.16
CSNK1E-213ENST00000495232 A0A0J9YXV3 536 aa7.81□□□□□ -1.16
CSNK1E-213ENST00000495232 TINCRA0A1B0GVN0 87 aa7.81□□□□□ -1.16
CSNK1E-213ENST00000495232 LINC00469Q8N7U9 141 aa7.81□□□□□ -1.16
CSNK1E-213ENST00000495232 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
CSNK1E-213ENST00000495232 PKIGQ9Y2B9 76 aa7.81□□□□□ -1.16
CSNK1E-213ENST00000495232 DNAH8Q96JB1 4490 aa7.81□□□□□ -1.16
CSNK1E-213ENST00000495232 SERF1AO75920 110 aa7.8□□□□□ -1.16
CSNK1E-213ENST00000495232 PRSS2P07478 247 aa7.8□□□□□ -1.16
CSNK1E-213ENST00000495232 FAM19A2Q8N3H0 131 aa7.8□□□□□ -1.16
CSNK1E-213ENST00000495232 DPH3Q96FX2 82 aa7.8□□□□□ -1.16
CSNK1E-213ENST00000495232 FAM30AQ9NZY2 134 aa7.8□□□□□ -1.16
CSNK1E-213ENST00000495232 HSPG2P98160 4391 aa7.8□□□□□ -1.16
CSNK1E-213ENST00000495232 RYR1P21817 5038 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 F8WDY8 70 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 XGP55808 180 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 SDIM1Q6ZPB5 146 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 Q6ZSA8 131 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 IFI27L1Q96BM0 104 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 CDKN2A-AS1Q9UH64 79 aa7.79□□□□□ -1.16
CSNK1E-213ENST00000495232 H3BRM9 83 aa7.78□□□□□ -1.16
CSNK1E-213ENST00000495232 NDUFA1O15239 70 aa7.78□□□□□ -1.16
CSNK1E-213ENST00000495232 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
CSNK1E-213ENST00000495232 HAMPP81172 84 aa7.78□□□□□ -1.16
CSNK1E-213ENST00000495232 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
CSNK1E-213ENST00000495232 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 C6orf226Q5I0X4 101 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 Q6ZRU5 148 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 CHAC1Q9BUX1 264 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
CSNK1E-213ENST00000495232 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
CSNK1E-213ENST00000495232 CKS1BP61024 79 aa7.76□□□□□ -1.17
CSNK1E-213ENST00000495232 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
CSNK1E-213ENST00000495232 HERC2O95714 4834 aa7.76□□□□□ -1.17
CSNK1E-213ENST00000495232 IGLV5-45A0A087WSX0 123 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 IGKV2-24A0A0C4DH68 120 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 LOC107984640A0A0U1RRK4 108 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 H0Y8G0 127 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 FABP4P15090 132 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 LINC00310P59036 64 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 SCXQ7RTU7 201 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 Q8IZM0 81 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 MRPL35Q9NZE8 188 aaKnown RBP7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 LINC00474Q9P2X8 69 aa7.75□□□□□ -1.17
CSNK1E-213ENST00000495232 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 NUPR1O60356 82 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 SMR3BP02814 79 aaPredicted RBP7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 SPINK8P0C7L1 97 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 KIAA0087Q14695 138 aa7.74□□□□□ -1.17
CSNK1E-213ENST00000495232 RNF151Q2KHN1 245 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms