RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SDIM1Q6ZPB5 146 aa10.26□□□□□ -0.77
LIME1-209ENST00000494776 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
LIME1-209ENST00000494776 LINC00526Q96FQ7 95 aa10.26□□□□□ -0.77
LIME1-209ENST00000494776 VCX2Q9H322 139 aa10.26□□□□□ -0.77
LIME1-209ENST00000494776 SMCO4Q9NRQ5 59 aa10.26□□□□□ -0.77
LIME1-209ENST00000494776 FA2HQ7L5A8 372 aa10.25□□□□□ -0.77
LIME1-209ENST00000494776 CIRBP-AS1Q8TBR5 109 aa10.25□□□□□ -0.77
LIME1-209ENST00000494776 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
LIME1-209ENST00000494776 TOMM6Q96B49 74 aa10.24□□□□□ -0.77
LIME1-209ENST00000494776 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
LIME1-209ENST00000494776 NPSP0C0P6 89 aa10.23□□□□□ -0.77
LIME1-209ENST00000494776 CARD19Q96LW7 228 aa10.23□□□□□ -0.77
LIME1-209ENST00000494776 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
LIME1-209ENST00000494776 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
LIME1-209ENST00000494776 IGLV4-69A0A075B6H9 119 aa10.22□□□□□ -0.77
LIME1-209ENST00000494776 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
LIME1-209ENST00000494776 COX6A2Q02221 97 aa10.22□□□□□ -0.77
LIME1-209ENST00000494776 SYCNQ0VAF6 134 aa10.22□□□□□ -0.77
LIME1-209ENST00000494776 ZC2HC1BQ5TFG8 222 aa10.22□□□□□ -0.77
LIME1-209ENST00000494776 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
LIME1-209ENST00000494776 LINC01549A6NIU2 74 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 UBE2D1P51668 147 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 SPAG11BQ08648 103 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 LINC00242Q5T6M2 205 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 ORAOV1Q8WV07 137 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 AMELXQ99217 191 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 TIMM17AQ99595 171 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 PKIGQ9Y2B9 76 aa10.21□□□□□ -0.77
LIME1-209ENST00000494776 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
LIME1-209ENST00000494776 PLA2G1BP04054 148 aaKnown RBP10.2□□□□□ -0.78
LIME1-209ENST00000494776 ERASQ7Z444 233 aa10.2□□□□□ -0.78
LIME1-209ENST00000494776 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
LIME1-209ENST00000494776 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
LIME1-209ENST00000494776 PANO1I0J062 215 aa10.19□□□□□ -0.78
LIME1-209ENST00000494776 CHTF8P0CG12 524 aa10.19□□□□□ -0.78
LIME1-209ENST00000494776 LINC00173Q6ZV60 143 aa10.19□□□□□ -0.78
LIME1-209ENST00000494776 CBLN2Q8IUK8 224 aa10.19□□□□□ -0.78
LIME1-209ENST00000494776 C2orf48Q96LS8 159 aa10.19□□□□□ -0.78
LIME1-209ENST00000494776 DNAH8Q96JB1 4490 aa10.18□□□□□ -0.78
LIME1-209ENST00000494776 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
LIME1-209ENST00000494776 Q6ZRU5 148 aa10.18□□□□□ -0.78
LIME1-209ENST00000494776 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
LIME1-209ENST00000494776 YPEL4Q96NS1 127 aa10.18□□□□□ -0.78
LIME1-209ENST00000494776 A0A087WZ39 114 aa10.17□□□□□ -0.78
LIME1-209ENST00000494776 LINC00614P0C842 121 aa10.17□□□□□ -0.78
LIME1-209ENST00000494776 RAB5BP61020 215 aa10.17□□□□□ -0.78
LIME1-209ENST00000494776 SEC11AP67812 179 aa10.17□□□□□ -0.78
LIME1-209ENST00000494776 MAJINQ3KP22 176 aa10.17□□□□□ -0.78
LIME1-209ENST00000494776 SPACA4Q8TDM5 124 aa10.17□□□□□ -0.78
LIME1-209ENST00000494776 CIRBPQ14011 172 aaKnown RBP10.16□□□□□ -0.78
LIME1-209ENST00000494776 GEMIN7Q9H840 131 aaKnown RBP10.16□□□□□ -0.78
LIME1-209ENST00000494776 A0A087WYN8 130 aa10.15□□□□□ -0.78
LIME1-209ENST00000494776 HERVK_113P63121 156 aa10.15□□□□□ -0.78
LIME1-209ENST00000494776 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.78
LIME1-209ENST00000494776 A0A096LNI7 61 aa10.14□□□□□ -0.79
LIME1-209ENST00000494776 LOC107984640A0A0U1RRK4 108 aa10.14□□□□□ -0.79
LIME1-209ENST00000494776 F8WDY8 70 aa10.14□□□□□ -0.79
LIME1-209ENST00000494776 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.14□□□□□ -0.79
LIME1-209ENST00000494776 NDUFA1O15239 70 aa10.14□□□□□ -0.79
LIME1-209ENST00000494776 GAGE2BQ13066 116 aa10.13□□□□□ -0.79
LIME1-209ENST00000494776 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
LIME1-209ENST00000494776 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
LIME1-209ENST00000494776 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
LIME1-209ENST00000494776 FAT1Q14517 4588 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 HBDP02042 147 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 PRSS2P07478 247 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 NDUFA6P56556 154 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 PMVKQ15126 192 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 PMCHL1Q16048 86 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 STPG4Q8N801 248 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 URB1-AS1Q96HZ7 61 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
LIME1-209ENST00000494776 RPL37AP61513 92 aaKnown RBP10.11□□□□□ -0.79
LIME1-209ENST00000494776 RPL18AQ02543 176 aaKnown RBP10.11□□□□□ -0.79
LIME1-209ENST00000494776 RNF151Q2KHN1 245 aa10.11□□□□□ -0.79
LIME1-209ENST00000494776 MRPL35Q9NZE8 188 aaKnown RBP10.11□□□□□ -0.79
LIME1-209ENST00000494776 PLAC8Q9NZF1 115 aa10.11□□□□□ -0.79
LIME1-209ENST00000494776 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
LIME1-209ENST00000494776 CDKN2A-AS1Q9UH64 79 aa10.11□□□□□ -0.79
LIME1-209ENST00000494776 VPS13BQ7Z7G8 4022 aa10.11□□□□□ -0.79
LIME1-209ENST00000494776 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
LIME1-209ENST00000494776 UNQ6190/PRO20217Q6UXQ8 127 aa10.1□□□□□ -0.79
LIME1-209ENST00000494776 LINC00469Q8N7U9 141 aa10.1□□□□□ -0.79
LIME1-209ENST00000494776 A0A096LNJ9 63 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 TRGC2P03986 189 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 KIAA0087Q14695 138 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
LIME1-209ENST00000494776 ATP5LO75964 103 aa10.08□□□□□ -0.8
LIME1-209ENST00000494776 CKS1BP61024 79 aa10.08□□□□□ -0.8
LIME1-209ENST00000494776 BAGE3Q86Y29 109 aa10.08□□□□□ -0.8
LIME1-209ENST00000494776 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
LIME1-209ENST00000494776 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
LIME1-209ENST00000494776 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
LIME1-209ENST00000494776 TRBV30A0A0K0K1B3 111 aa10.06□□□□□ -0.8
LIME1-209ENST00000494776 PDZD11Q5EBL8 140 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms