RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
TRA2A-209ENST00000494255 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 ATP6V1G1O75348 118 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 SEC11AP67812 179 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 LINC00242Q5T6M2 205 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 A0A096LNJ9 63 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 IGHV3OR16-9A0A0B4J2B5 98 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
TRA2A-209ENST00000494255 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
TRA2A-209ENST00000494255 DNAH11Q96DT5 4516 aa8.1□□□□□ -1.11
TRA2A-209ENST00000494255 ATP5LO75964 103 aa8.1□□□□□ -1.11
TRA2A-209ENST00000494255 GEMIN7Q9H840 131 aaKnown RBP8.1□□□□□ -1.11
TRA2A-209ENST00000494255 HSBP1O75506 76 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 HERVK_113P63121 156 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 COX6A2Q02221 97 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 PMVKQ15126 192 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 BIRC6Q9NR09 4857 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 PKHD1P08F94 4074 aa8.09□□□□□ -1.11
TRA2A-209ENST00000494255 A0A087WZ39 114 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 NDUFA6P56556 154 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 CST9LQ9H4G1 147 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 SLPIP03973 132 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
TRA2A-209ENST00000494255 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
TRA2A-209ENST00000494255 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
TRA2A-209ENST00000494255 SERF1AO75920 110 aa8.07□□□□□ -1.12
TRA2A-209ENST00000494255 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
TRA2A-209ENST00000494255 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
TRA2A-209ENST00000494255 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
TRA2A-209ENST00000494255 FAM19A2Q8N3H0 131 aa8.06□□□□□ -1.12
TRA2A-209ENST00000494255 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
TRA2A-209ENST00000494255 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 C2orf48Q96LS8 159 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 PACRGQ96M98 296 aaPredicted RBP8.05□□□□□ -1.12
TRA2A-209ENST00000494255 CAMK2N2Q96S95 79 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 F8WDY8 70 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 Q6ZSA8 131 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 IFI27L1Q96BM0 104 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 FAM30AQ9NZY2 134 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 CDKN2A-AS1Q9UH64 79 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 PKIGQ9Y2B9 76 aa8.05□□□□□ -1.12
TRA2A-209ENST00000494255 DYNC1H1Q14204 4646 aaKnown RBP8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BKO60814 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BJP06899 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BOP23527 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BBP33778 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 XGP55808 180 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BDP58876 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BCP62807 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST2H2BEQ16778 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.04□□□□□ -1.12
TRA2A-209ENST00000494255 SDIM1Q6ZPB5 146 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BHQ93079 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BNQ99877 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 HIST1H2BMQ99879 126 aa8.04□□□□□ -1.12
TRA2A-209ENST00000494255 PRSS2P07478 247 aa8.03□□□□□ -1.12
TRA2A-209ENST00000494255 LINC00310P59036 64 aa8.03□□□□□ -1.12
TRA2A-209ENST00000494255 NDUFA1O15239 70 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 Q6ZRU5 148 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 CHAC1Q9BUX1 264 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 IGLV5-45A0A087WSX0 123 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 H3BRM9 83 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 NUPR1O60356 82 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 IGLC3P0DOY3 106 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 HAMPP81172 84 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 TOMM7Q9P0U1 55 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 HSPB8Q9UJY1 196 aa8.02□□□□□ -1.13
TRA2A-209ENST00000494255 CHTOPQ9Y3Y2 248 aaKnown RBP8.01□□□□□ -1.13
TRA2A-209ENST00000494255 TRAV12-1A0A0B4J245 112 aa8□□□□□ -1.13
TRA2A-209ENST00000494255 FABP4P15090 132 aa8□□□□□ -1.13
TRA2A-209ENST00000494255 KIAA0087Q14695 138 aa8□□□□□ -1.13
TRA2A-209ENST00000494255 RNF151Q2KHN1 245 aa8□□□□□ -1.13
TRA2A-209ENST00000494255 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
TRA2A-209ENST00000494255 DPH3Q96FX2 82 aa8□□□□□ -1.13
TRA2A-209ENST00000494255 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
TRA2A-209ENST00000494255 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 SMIM1B2RUZ4 78 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 CKS1BP61024 79 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 SCXQ7RTU7 201 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 Q8IZM0 81 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
TRA2A-209ENST00000494255 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
TRA2A-209ENST00000494255 H0Y8G0 127 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 UNQ6190/PRO20217Q6UXQ8 127 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 LRP1BQ9NZR2 4599 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 IGKV2-24A0A0C4DH68 120 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
TRA2A-209ENST00000494255 ZNF22P17026 224 aaPredicted RBP7.98□□□□□ -1.13
TRA2A-209ENST00000494255 TMEM170BQ5T4T1 132 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms