RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 COX8CQ7Z4L0 72 aa13.95□□□□□ -0.18
COL27A1-207ENST00000494090 PTPRSQ13332 1948 aa13.95□□□□□ -0.18
COL27A1-207ENST00000494090 IGLV2-18A0A075B6J9 118 aa13.95□□□□□ -0.18
COL27A1-207ENST00000494090 LOC100131303A0A0U1RQF7 123 aa13.95□□□□□ -0.18
COL27A1-207ENST00000494090 Q6ZQY7 126 aa13.95□□□□□ -0.18
COL27A1-207ENST00000494090 IGKV2-28A0A075B6P5 120 aa13.94□□□□□ -0.18
COL27A1-207ENST00000494090 IGKV2D-28P01615 120 aa13.94□□□□□ -0.18
COL27A1-207ENST00000494090 MYO18BQ8IUG5 2567 aa13.94□□□□□ -0.18
COL27A1-207ENST00000494090 WFDC10AQ9H1F0 79 aa13.94□□□□□ -0.18
COL27A1-207ENST00000494090 PRM2P04554 102 aa13.94□□□□□ -0.18
COL27A1-207ENST00000494090 FAM236DA0A1B0GTK5 79 aa13.93□□□□□ -0.18
COL27A1-207ENST00000494090 FAM236CP0DP71 79 aa13.93□□□□□ -0.18
COL27A1-207ENST00000494090 SCXQ7RTU7 201 aa13.93□□□□□ -0.18
COL27A1-207ENST00000494090 POM121L12Q8N7R1 296 aa13.93□□□□□ -0.18
COL27A1-207ENST00000494090 CDC42SE2Q9NRR3 84 aa13.93□□□□□ -0.18
COL27A1-207ENST00000494090 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-207ENST00000494090 SMIM11BQ8TCY0 68 aa13.92□□□□□ -0.18
COL27A1-207ENST00000494090 IGHV4-30-4P0DP06 118 aa13.92□□□□□ -0.18
COL27A1-207ENST00000494090 HIVEP3Q5T1R4 2406 aa13.91□□□□□ -0.18
COL27A1-207ENST00000494090 WFDC10BQ8IUB3 73 aa13.91□□□□□ -0.18
COL27A1-207ENST00000494090 NDUFC1O43677 76 aa13.91□□□□□ -0.18
COL27A1-207ENST00000494090 ATP5EP56381 51 aaPredicted RBP13.91□□□□□ -0.18
COL27A1-207ENST00000494090 ZNF73O43830 326 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-207ENST00000494090 ZNF580Q9UK33 172 aa13.9□□□□□ -0.18
COL27A1-207ENST00000494090 AVPP01185 164 aa13.9□□□□□ -0.18
COL27A1-207ENST00000494090 NUPR2A6NF83 97 aa13.89□□□□□ -0.19
COL27A1-207ENST00000494090 BRI3O95415 125 aa13.89□□□□□ -0.19
COL27A1-207ENST00000494090 PRR15LQ9BU68 103 aa13.89□□□□□ -0.19
COL27A1-207ENST00000494090 LY6G6CO95867 125 aa13.88□□□□□ -0.19
COL27A1-207ENST00000494090 A0A0J9YWU9 116 aa13.88□□□□□ -0.19
COL27A1-207ENST00000494090 V9GYY9 64 aa13.88□□□□□ -0.19
COL27A1-207ENST00000494090 C3orf84H3BNL1 204 aa13.88□□□□□ -0.19
COL27A1-207ENST00000494090 M0R2N4 97 aa13.88□□□□□ -0.19
COL27A1-207ENST00000494090 ODF3L2Q3SX64 289 aa13.88□□□□□ -0.19
COL27A1-207ENST00000494090 LINC00242Q5T6M2 205 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 PPDPFQ9H3Y8 114 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 PIEZO1Q92508 2521 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 PLAC8L1A1L4L8 177 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 XGP55808 180 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 NANOS2P60321 138 aaKnown RBP13.87□□□□□ -0.19
COL27A1-207ENST00000494090 EGFEM1PQ0D2K5 195 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 FAM19A3Q7Z5A8 133 aa13.87□□□□□ -0.19
COL27A1-207ENST00000494090 IGLV1-51P01701 117 aa13.86□□□□□ -0.19
COL27A1-207ENST00000494090 SERP2Q8N6R1 65 aa13.86□□□□□ -0.19
COL27A1-207ENST00000494090 EDN2P20800 178 aa13.86□□□□□ -0.19
COL27A1-207ENST00000494090 LINC00526Q96FQ7 95 aa13.86□□□□□ -0.19
COL27A1-207ENST00000494090 SPINK6Q6UWN8 80 aa13.85□□□□□ -0.19
COL27A1-207ENST00000494090 OXLD1Q5BKU9 147 aa13.85□□□□□ -0.19
COL27A1-207ENST00000494090 BRK1Q8WUW1 75 aa13.85□□□□□ -0.19
COL27A1-207ENST00000494090 CCDC168Q8NDH2 2452 aa13.84□□□□□ -0.19
COL27A1-207ENST00000494090 CYSRT1A8MQ03 144 aa13.84□□□□□ -0.19
COL27A1-207ENST00000494090 COL5A1P20908 1838 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-207ENST00000494090 MRPL55Q7Z7F7 128 aaKnown RBP13.84□□□□□ -0.19
COL27A1-207ENST00000494090 CPAMD8Q8IZJ3 1885 aa13.83□□□□□ -0.2
COL27A1-207ENST00000494090 SVIPQ8NHG7 77 aa13.83□□□□□ -0.2
COL27A1-207ENST00000494090 C16orf95Q9H693 158 aa13.83□□□□□ -0.2
COL27A1-207ENST00000494090 A0A096LNJ9 63 aa13.83□□□□□ -0.2
COL27A1-207ENST00000494090 NDUFC2-KCTD14E9PQ53 114 aa13.82□□□□□ -0.2
COL27A1-207ENST00000494090 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
COL27A1-207ENST00000494090 RPL28P46779 137 aaKnown RBP13.81□□□□□ -0.2
COL27A1-207ENST00000494090 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
COL27A1-207ENST00000494090 RPL37AP8A6NKH3 93 aa13.8□□□□□ -0.2
COL27A1-207ENST00000494090 F8WDY8 70 aa13.8□□□□□ -0.2
COL27A1-207ENST00000494090 Q8N9L7 120 aa13.8□□□□□ -0.2
COL27A1-207ENST00000494090 FAM240AA0A1B0GVK7 77 aa13.8□□□□□ -0.2
COL27A1-207ENST00000494090 TSPEAR-AS2P59090 65 aa13.79□□□□□ -0.2
COL27A1-207ENST00000494090 WFDC13Q8IUB5 93 aa13.79□□□□□ -0.2
COL27A1-207ENST00000494090 Q6Q795 121 aa13.79□□□□□ -0.2
COL27A1-207ENST00000494090 Q6JHZ5 121 aa13.79□□□□□ -0.2
COL27A1-207ENST00000494090 COX7CP15954 63 aa13.78□□□□□ -0.2
COL27A1-207ENST00000494090 SPTSSBQ8NFR3 76 aa13.78□□□□□ -0.2
COL27A1-207ENST00000494090 ARHGAP32A7KAX9 2087 aa13.78□□□□□ -0.2
COL27A1-207ENST00000494090 AMELXQ99217 191 aa13.78□□□□□ -0.2
COL27A1-207ENST00000494090 C10orf25Q5T742 122 aa13.78□□□□□ -0.2
COL27A1-207ENST00000494090 IGLV9-49A0A0B4J1Y8 123 aa13.76□□□□□ -0.21
COL27A1-207ENST00000494090 CSDC2Q9Y534 153 aaKnown RBP13.76□□□□□ -0.21
COL27A1-207ENST00000494090 M0QXV9 152 aa13.76□□□□□ -0.21
COL27A1-207ENST00000494090 MPLKIPQ8TAP9 179 aa13.76□□□□□ -0.21
COL27A1-207ENST00000494090 CCDC179H3BU77 68 aa13.75□□□□□ -0.21
COL27A1-207ENST00000494090 COX6A2Q02221 97 aa13.75□□□□□ -0.21
COL27A1-207ENST00000494090 SERP1Q9Y6X1 66 aa13.75□□□□□ -0.21
COL27A1-207ENST00000494090 NCOR2Q9Y618 2525 aa13.75□□□□□ -0.21
COL27A1-207ENST00000494090 KRTAP10-9P60411 292 aa13.74□□□□□ -0.21
COL27A1-207ENST00000494090 HRCT1Q6UXD1 115 aa13.74□□□□□ -0.21
COL27A1-207ENST00000494090 UNQ6190/PRO20217Q6UXQ8 127 aa13.74□□□□□ -0.21
COL27A1-207ENST00000494090 A0A1W2PPR1 153 aa13.74□□□□□ -0.21
COL27A1-207ENST00000494090 NTM-AS1Q6ZSK4 140 aa13.74□□□□□ -0.21
COL27A1-207ENST00000494090 C2CD3Q4AC94 2353 aa13.73□□□□□ -0.21
COL27A1-207ENST00000494090 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
COL27A1-207ENST00000494090 LINC00694P0DN24 101 aa13.71□□□□□ -0.21
COL27A1-207ENST00000494090 ADAMTSL4-AS1Q5T5F5 129 aa13.71□□□□□ -0.21
COL27A1-207ENST00000494090 FHL2Q14192 279 aa13.71□□□□□ -0.21
COL27A1-207ENST00000494090 REG3GQ6UW15 175 aa13.7□□□□□ -0.22
COL27A1-207ENST00000494090 SMR3AQ99954 134 aa13.7□□□□□ -0.22
COL27A1-207ENST00000494090 SNURFQ9Y675 71 aa13.7□□□□□ -0.22
COL27A1-207ENST00000494090 ABCA2Q9BZC7 2435 aa13.7□□□□□ -0.22
COL27A1-207ENST00000494090 Q8N814 137 aa13.69□□□□□ -0.22
COL27A1-207ENST00000494090 IGLV4-60A0A075B6I1 120 aa13.69□□□□□ -0.22
COL27A1-207ENST00000494090 PRRC2AP48634 2157 aaKnown RBP13.68□□□□□ -0.22
COL27A1-207ENST00000494090 TRBV10-3A0A0K0K1G6 114 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms