RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 MALP21145 153 aa5.9□□□□□ -1.46
HDAC6-234ENST00000493923 TRPT1Q86TN4 253 aaKnown RBP5.9□□□□□ -1.46
HDAC6-234ENST00000493923 METTL26Q96S19 204 aa5.9□□□□□ -1.46
HDAC6-234ENST00000493923 TP53TG1Q9Y2A0 90 aa5.9□□□□□ -1.46
HDAC6-234ENST00000493923 TRGV11A0A075B6L2 103 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 SDHAF1A6NFY7 115 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 IGKV1-17P01599 117 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 APOC4P55056 127 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
HDAC6-234ENST00000493923 CEMP1Q6PRD7 247 aaPredicted RBP5.89□□□□□ -1.47
HDAC6-234ENST00000493923 NRACQ8N912 160 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 PLEKHB2Q96CS7 222 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 C8orf49Q96NF6 230 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 DNAH2Q9P225 4427 aa5.89□□□□□ -1.47
HDAC6-234ENST00000493923 FAT2Q9NYQ8 4349 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 LOC107984640A0A0U1RRK4 108 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 TEX49A0A1B0GTD5 131 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 LY6G6CO95867 125 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 DEFB131AP59861 70 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 SFTA2Q6UW10 78 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 C5orf38Q86SI9 138 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 DAND5Q8N907 189 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 COPS9Q8WXC6 57 aa5.88□□□□□ -1.47
HDAC6-234ENST00000493923 KNCNA6PVL3 124 aa5.87□□□□□ -1.47
HDAC6-234ENST00000493923 H3BTX0 84 aa5.87□□□□□ -1.47
HDAC6-234ENST00000493923 LEPROTO15243 131 aa5.87□□□□□ -1.47
HDAC6-234ENST00000493923 INAFM2P0DMQ5 153 aa5.87□□□□□ -1.47
HDAC6-234ENST00000493923 HIST1H4AP62805 103 aaKnown RBP5.87□□□□□ -1.47
HDAC6-234ENST00000493923 DPH3Q96FX2 82 aa5.87□□□□□ -1.47
HDAC6-234ENST00000493923 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 J3QQQ9 107 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 K7EQG2 157 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 M0R3E3 92 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 LST1O00453 97 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 NDUFC2O95298 119 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 RBMY1A1P0DJD3 496 aaKnown RBP5.86□□□□□ -1.47
HDAC6-234ENST00000493923 RBMY1CP0DJD4 496 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 DEFB1P60022 68 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
HDAC6-234ENST00000493923 RBMY1FQ15415 496 aaKnown RBP5.86□□□□□ -1.47
HDAC6-234ENST00000493923 SDIM1Q6ZPB5 146 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 RNF125Q96EQ8 232 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 ICOSQ9Y6W8 199 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 U3KQE9 123 aa5.86□□□□□ -1.47
HDAC6-234ENST00000493923 PKHD1P08F94 4074 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 TRAV13-1A0A0B4J241 112 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 NUPR2A6NF83 97 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 H7C423 109 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 MED14OSP0DP75 135 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 C2orf66Q6UXQ4 117 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 Q8NAQ8 132 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 DCANP1Q8TF63 244 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 MRPL53Q96EL3 112 aaKnown RBP5.85□□□□□ -1.47
HDAC6-234ENST00000493923 AGPAT4-IT1Q9H0P7 198 aa5.85□□□□□ -1.47
HDAC6-234ENST00000493923 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.47
HDAC6-234ENST00000493923 TMEM223A0PJW6 202 aa5.84□□□□□ -1.47
HDAC6-234ENST00000493923 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
HDAC6-234ENST00000493923 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
HDAC6-234ENST00000493923 C2orf48Q96LS8 159 aa5.84□□□□□ -1.47
HDAC6-234ENST00000493923 C11orf68Q9H3H3 251 aaKnown RBP5.84□□□□□ -1.47
HDAC6-234ENST00000493923 DPH3P1Q9H4G8 78 aa5.84□□□□□ -1.47
HDAC6-234ENST00000493923 X6R8D5 127 aa5.84□□□□□ -1.47
HDAC6-234ENST00000493923 KIAA1109Q2LD37 5005 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 IGHV4-28A0A0C4DH34 117 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 TRIAP1O43715 76 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 FAM222AQ5U5X8 452 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 SPANXN1Q5VSR9 72 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 CSNK1G2-AS1Q8NCQ2 148 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 C11orf45Q8TAV5 145 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 CELA1Q9UNI1 258 aa5.83□□□□□ -1.48
HDAC6-234ENST00000493923 CMC4P56277 68 aaPredicted RBP5.82□□□□□ -1.48
HDAC6-234ENST00000493923 MRPS36P82909 103 aaKnown RBP5.82□□□□□ -1.48
HDAC6-234ENST00000493923 ZNF415Q09FC8 603 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 STHQ8IWL8 128 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 C17orf77Q96MU5 243 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 JPT2Q9H910 190 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 MSRB1Q9NZV6 116 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 KLK5Q9Y337 293 aaPredicted RBP5.82□□□□□ -1.48
HDAC6-234ENST00000493923 LENEPQ9Y5L5 61 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 DNAH11Q96DT5 4516 aa5.82□□□□□ -1.48
HDAC6-234ENST00000493923 PKD1P98161 4303 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 IGLV4-69A0A075B6H9 119 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
HDAC6-234ENST00000493923 A0A0J9YXY3 114 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 TIMM17BO60830 172 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
HDAC6-234ENST00000493923 GATA1P15976 413 aaPredicted RBP5.81□□□□□ -1.48
HDAC6-234ENST00000493923 NPC2P61916 151 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 Q6JHZ5 121 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 Q6ZTC4 211 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 MUSTN1Q8IVN3 82 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 AMELXQ99217 191 aa5.81□□□□□ -1.48
HDAC6-234ENST00000493923 TINCRA0A1B0GVN0 87 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms