RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 UBE2D2P62837 147 aa9.9□□□□□ -0.82
VCP-207ENST00000493886 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.82
VCP-207ENST00000493886 A8MZ25 164 aa9.9□□□□□ -0.82
VCP-207ENST00000493886 INAFM1C9JVW0 142 aa9.9□□□□□ -0.82
VCP-207ENST00000493886 EIF4EBP3O60516 100 aaPredicted RBP9.9□□□□□ -0.82
VCP-207ENST00000493886 NPC2P61916 151 aa9.9□□□□□ -0.82
VCP-207ENST00000493886 TRGV1A0A0A0MS02 117 aa9.89□□□□□ -0.83
VCP-207ENST00000493886 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
VCP-207ENST00000493886 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
VCP-207ENST00000493886 A0A0U1RQV1 116 aa9.89□□□□□ -0.83
VCP-207ENST00000493886 PF4P02776 101 aa9.89□□□□□ -0.83
VCP-207ENST00000493886 Q1RN00 199 aa9.89□□□□□ -0.83
VCP-207ENST00000493886 MUSTN1Q8IVN3 82 aa9.89□□□□□ -0.83
VCP-207ENST00000493886 PRO1854Q9UHT4 67 aa9.89□□□□□ -0.83
VCP-207ENST00000493886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
VCP-207ENST00000493886 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
VCP-207ENST00000493886 LEPROTO15243 131 aa9.88□□□□□ -0.83
VCP-207ENST00000493886 GAGE2AQ6NT46 116 aa9.88□□□□□ -0.83
VCP-207ENST00000493886 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
VCP-207ENST00000493886 C2orf48Q96LS8 159 aa9.88□□□□□ -0.83
VCP-207ENST00000493886 DSCR8Q96T75 97 aa9.87□□□□□ -0.83
VCP-207ENST00000493886 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
VCP-207ENST00000493886 PRSS2P07478 247 aa9.87□□□□□ -0.83
VCP-207ENST00000493886 Q6ZTI0 123 aa9.87□□□□□ -0.83
VCP-207ENST00000493886 LINC00482Q8N8I6 264 aa9.87□□□□□ -0.83
VCP-207ENST00000493886 OTOGQ6ZRI0 2925 aa9.87□□□□□ -0.83
VCP-207ENST00000493886 TIRAPP58753 221 aa9.86□□□□□ -0.83
VCP-207ENST00000493886 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
VCP-207ENST00000493886 IGHV3-30-3P0DP02 117 aa9.86□□□□□ -0.83
VCP-207ENST00000493886 RETNQ9HD89 108 aa9.86□□□□□ -0.83
VCP-207ENST00000493886 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
VCP-207ENST00000493886 C1orf195Q5TG92 126 aa9.85□□□□□ -0.83
VCP-207ENST00000493886 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
VCP-207ENST00000493886 FAM104AQ969W3 186 aa9.85□□□□□ -0.83
VCP-207ENST00000493886 NOP10Q9NPE3 64 aaKnown RBP9.85□□□□□ -0.83
VCP-207ENST00000493886 A0A0J9YXY3 114 aa9.84□□□□□ -0.83
VCP-207ENST00000493886 CSNK1G2-AS1Q8NCQ2 148 aa9.84□□□□□ -0.83
VCP-207ENST00000493886 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
VCP-207ENST00000493886 DAZ2Q13117 558 aaKnown RBP9.84□□□□□ -0.83
VCP-207ENST00000493886 DPH3Q96FX2 82 aa9.84□□□□□ -0.83
VCP-207ENST00000493886 PLAC8L1A1L4L8 177 aa9.83□□□□□ -0.84
VCP-207ENST00000493886 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
VCP-207ENST00000493886 DAND5Q8N907 189 aa9.83□□□□□ -0.84
VCP-207ENST00000493886 UBE2D4Q9Y2X8 147 aa9.83□□□□□ -0.84
VCP-207ENST00000493886 FN1P02751 2386 aaKnown RBP9.83□□□□□ -0.84
VCP-207ENST00000493886 K7EQD1 137 aa9.82□□□□□ -0.84
VCP-207ENST00000493886 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
VCP-207ENST00000493886 UQCRQO14949 82 aa9.82□□□□□ -0.84
VCP-207ENST00000493886 TRBV10-1A0A0K0K1A3 114 aa9.81□□□□□ -0.84
VCP-207ENST00000493886 SLC25A20O43772 301 aa9.81□□□□□ -0.84
VCP-207ENST00000493886 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
VCP-207ENST00000493886 NDUFA12Q9UI09 145 aa9.81□□□□□ -0.84
VCP-207ENST00000493886 hADV29S1A0JD25 119 aa9.8□□□□□ -0.84
VCP-207ENST00000493886 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
VCP-207ENST00000493886 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
VCP-207ENST00000493886 LINC00526Q96FQ7 95 aa9.8□□□□□ -0.84
VCP-207ENST00000493886 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
VCP-207ENST00000493886 CYSTM1Q9H1C7 97 aa9.8□□□□□ -0.84
VCP-207ENST00000493886 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
VCP-207ENST00000493886 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
VCP-207ENST00000493886 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
VCP-207ENST00000493886 PFN2P35080 140 aa9.79□□□□□ -0.84
VCP-207ENST00000493886 SPATA3Q8NHX4 192 aa9.79□□□□□ -0.84
VCP-207ENST00000493886 TRIAP1O43715 76 aa9.78□□□□□ -0.84
VCP-207ENST00000493886 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
VCP-207ENST00000493886 LITAFQ99732 161 aa9.78□□□□□ -0.84
VCP-207ENST00000493886 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
VCP-207ENST00000493886 A0A0B4J2C4 111 aa9.77□□□□□ -0.84
VCP-207ENST00000493886 DAZ4Q86SG3 579 aaKnown RBP9.77□□□□□ -0.84
VCP-207ENST00000493886 DAZ3Q9NR90 486 aaKnown RBP9.77□□□□□ -0.84
VCP-207ENST00000493886 ZNF561-AS1K7EIQ3 104 aa9.77□□□□□ -0.85
VCP-207ENST00000493886 C9orf66Q5T8R8 295 aa9.77□□□□□ -0.85
VCP-207ENST00000493886 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.85
VCP-207ENST00000493886 CDKN2A-AS1Q9UH64 79 aa9.77□□□□□ -0.85
VCP-207ENST00000493886 HIVEP1P15822 2718 aa9.77□□□□□ -0.85
VCP-207ENST00000493886 VSIG2Q96IQ7 327 aa9.76□□□□□ -0.85
VCP-207ENST00000493886 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
VCP-207ENST00000493886 DGAT2L7PQ6IED9 249 aa9.76□□□□□ -0.85
VCP-207ENST00000493886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
VCP-207ENST00000493886 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
VCP-207ENST00000493886 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
VCP-207ENST00000493886 C6orf226Q5I0X4 101 aa9.75□□□□□ -0.85
VCP-207ENST00000493886 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
VCP-207ENST00000493886 CLEC2BQ92478 149 aa9.75□□□□□ -0.85
VCP-207ENST00000493886 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
VCP-207ENST00000493886 TRACP01848 142 aa9.74□□□□□ -0.85
VCP-207ENST00000493886 LINC01620Q4KN68 170 aa9.74□□□□□ -0.85
VCP-207ENST00000493886 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
VCP-207ENST00000493886 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
VCP-207ENST00000493886 COX6A2Q02221 97 aa9.73□□□□□ -0.85
VCP-207ENST00000493886 LOC100131303A0A0U1RQF7 123 aa9.73□□□□□ -0.85
VCP-207ENST00000493886 ATXN8Q156A1 80 aa9.73□□□□□ -0.85
VCP-207ENST00000493886 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
VCP-207ENST00000493886 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
VCP-207ENST00000493886 MIAQ16674 131 aa9.72□□□□□ -0.85
VCP-207ENST00000493886 FHL2Q14192 279 aa9.72□□□□□ -0.85
VCP-207ENST00000493886 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.85
VCP-207ENST00000493886 RPL13AP40429 203 aaKnown RBP9.71□□□□□ -0.86
VCP-207ENST00000493886 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
VCP-207ENST00000493886 VWFP04275 2813 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms