RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 MP68P56378 58 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 PIGPP57054 158 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 C12orf73Q69YU5 71 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 LCN15Q6UWW0 184 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 C8orf59Q8N0T1 100 aaPredicted RBP1.56□□□□□ -2.16
UBR4-215ENST00000492606 PYDC1Q8WXC3 89 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 A0A0B4J2C4 111 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 IRGMA1A4Y4 181 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 C19orf71A6NCJ1 209 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 RGS5O15539 181 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 P0C880 135 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 CXCL2P19875 107 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 S100A1P23297 94 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 S100A2P29034 98 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 S100A5P33763 92 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 AQP4P55087 323 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 DEFA1P59665 94 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 DEFA3P59666 94 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 RGS21Q2M5E4 152 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 LPCAT3Q6P1A2 487 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 PP632Q6XCG6 107 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 OR2D3Q8NGH3 330 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 PLEKHB2Q96CS7 222 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 CNBD2Q96M20 576 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 TMEM147Q9BVK8 224 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 GABARAPL1Q9H0R8 117 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 COMMD3Q9UBI1 195 aa1.55□□□□□ -2.16
UBR4-215ENST00000492606 TRBV7-3A0A075B6L6 115 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 A0A0G2JQZ4 141 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 A0A1B0GU33 70 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 LOC100130705A0A1B0GUX0 176 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 EFCAB10A6NFE3 127 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 K7ERS5 55 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 HMGB3O15347 200 aaKnown RBP1.54□□□□□ -2.16
UBR4-215ENST00000492606 PGLYRP1O75594 196 aaPredicted RBP1.54□□□□□ -2.16
UBR4-215ENST00000492606 CTXN2P0C2S0 81 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 FXYD4P59646 89 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 Q6AWC8 147 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 AMMECR1LQ6DCA0 310 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 CLVS1Q8IUQ0 354 aaPredicted RBP1.54□□□□□ -2.16
UBR4-215ENST00000492606 RNASE11Q8TAA1 199 aaKnown RBP1.54□□□□□ -2.16
UBR4-215ENST00000492606 CANT1Q8WVQ1 401 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 AP3S1Q92572 193 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 TRGV9Q99603 122 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 CYSTM1Q9H1C7 97 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 DUSP21Q9H596 190 aa1.54□□□□□ -2.16
UBR4-215ENST00000492606 FAM25AB3EWG3 89 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 FAM25CB3EWG5 89 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 FAM25GB3EWG6 89 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 H3BQ15 152 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 PPYP01298 95 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 FLI1Q01543 452 aaPredicted RBP1.53□□□□□ -2.16
UBR4-215ENST00000492606 OR5A1Q8NGJ0 315 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 CYGBQ8WWM9 190 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 AQP10Q96PS8 301 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 CCDC32Q9BV29 185 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 GNB1LQ9BYB4 327 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 ENY2Q9NPA8 101 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 CKLFQ9UBR5 152 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 C22orf24Q9Y442 160 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 TRAPPC1Q9Y5R8 145 aa1.53□□□□□ -2.16
UBR4-215ENST00000492606 A6NED7 52 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 FABP1P07148 127 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 AKR1C4P17516 323 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 DAPP51397 102 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 MT1XP80297 61 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 C10orf91Q5T1B1 145 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 LYZL1Q6UWQ5 148 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 ATP11AUNQ6ZP68 121 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 LYZL2Q7Z4W2 148 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 ACBD7Q8N6N7 88 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 OR10D4PQ8NGN7 298 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 MCFD2Q8NI22 146 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 ASB13Q8WXK3 278 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 PTH2Q96A98 100 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 SMIM19Q96E16 107 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 IMMP2LQ96T52 175 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 CCDC90BQ9GZT6 254 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 NAA60Q9H7X0 242 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 COPZ2Q9P299 210 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 PXMP4Q9Y6I8 212 aa1.52□□□□□ -2.17
UBR4-215ENST00000492606 TRBV24-1A0A075B6N3 115 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 TRBV10-1A0A0K0K1A3 114 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 TINCRA0A1B0GVN0 87 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 CFDP00746 253 aaPredicted RBP1.51□□□□□ -2.17
UBR4-215ENST00000492606 IGLC2P0DOY2 106 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 ESDP10768 282 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 HIST1H1DP16402 221 aaKnown RBP1.51□□□□□ -2.17
UBR4-215ENST00000492606 MYL12AP19105 171 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 PVALBP20472 110 aaPredicted RBP1.51□□□□□ -2.17
UBR4-215ENST00000492606 SDC2P34741 201 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 LINC00313P59037 77 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 AP3S2P59780 193 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 PRLHP81277 87 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 MRPS10P82664 201 aaKnown RBP1.51□□□□□ -2.17
UBR4-215ENST00000492606 MLLT11Q13015 90 aaPredicted RBP1.51□□□□□ -2.17
UBR4-215ENST00000492606 NEDD8Q15843 81 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 CENPWQ5EE01 88 aa1.51□□□□□ -2.17
UBR4-215ENST00000492606 NMSQ5H8A3 153 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms