RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 APOMO95445 188 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 PPBPP02775 128 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 NDUFA5Q16718 116 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 Q6ZRP5 223 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 Q6ZUT4 128 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 TMEM18Q96B42 140 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 SMIM2Q9BVW6 85 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 SPANXA1Q9NS26 97 aa5.17□□□□□ -1.58
SMARCB1-207ENST00000491967 TRAV13-1A0A0B4J241 112 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 NPYP01303 97 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 MALP21145 153 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 CKS2P33552 79 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 RPL39P62891 51 aaKnown RBP5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 HBBP68871 147 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 RNASE13Q5GAN3 156 aaKnown RBP5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 C5orf38Q86SI9 138 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 OR10D4PQ8NGN7 298 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 SEC11CQ9BY50 192 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 PYGO1Q9Y3Y4 419 aa5.16□□□□□ -1.58
SMARCB1-207ENST00000491967 D6R8Y8 96 aa5.15□□□□□ -1.59
SMARCB1-207ENST00000491967 S100A8P05109 93 aa5.15□□□□□ -1.59
SMARCB1-207ENST00000491967 TLX1NBP0CAT3 122 aa5.15□□□□□ -1.59
SMARCB1-207ENST00000491967 CAMK2N2Q96S95 79 aa5.15□□□□□ -1.59
SMARCB1-207ENST00000491967 OPRPNQ99935 248 aaPredicted RBP5.15□□□□□ -1.59
SMARCB1-207ENST00000491967 MRPL35Q9NZE8 188 aaKnown RBP5.15□□□□□ -1.59
SMARCB1-207ENST00000491967 APOC3P02656 99 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 MT-ND4LP03901 98 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 PNRC1Q12796 327 aaPredicted RBP5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 GAGE2BQ13066 116 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 KIAA0087Q14695 138 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 C10orf91Q5T1B1 145 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 ATP5L2Q7Z4Y8 100 aa5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 CARHSP1Q9Y2V2 147 aaKnown RBP5.14□□□□□ -1.59
SMARCB1-207ENST00000491967 A0A087WZ39 114 aa5.13□□□□□ -1.59
SMARCB1-207ENST00000491967 SPAG11BQ08648 103 aa5.13□□□□□ -1.59
SMARCB1-207ENST00000491967 MRPL54Q6P161 138 aaKnown RBP5.13□□□□□ -1.59
SMARCB1-207ENST00000491967 ORMDL3Q8N138 153 aa5.13□□□□□ -1.59
SMARCB1-207ENST00000491967 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
SMARCB1-207ENST00000491967 LRP2P98164 4655 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 ODF1Q14990 250 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 LINC00242Q5T6M2 205 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 C10orf25Q5T742 122 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 KRTAP7-1Q8IUC3 87 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 LINC01561Q8N1V8 128 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 ANAPC16Q96DE5 110 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 IMMP2LQ96T52 175 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 RPS10P5Q9NQ39 176 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 LAMTOR2Q9Y2Q5 125 aa5.12□□□□□ -1.59
SMARCB1-207ENST00000491967 IGLV4-3A0A075B6K6 122 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 NDUFA1O15239 70 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 NPSP0C0P6 89 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 UNQ6190/PRO20217Q6UXQ8 127 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 FAM19A3Q7Z5A8 133 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 KRTAP11-1Q8IUC1 163 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 SVBPQ8N300 66 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 ORAOV1Q8WV07 137 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 PRELID3AQ96N28 172 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 C6orf48Q9UBA6 75 aa5.11□□□□□ -1.59
SMARCB1-207ENST00000491967 IFITM10A6NMD0 228 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 K7EMI3 77 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 LCE2BO14633 110 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 SNAPINO95295 136 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 RAB5AP20339 215 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 RNF213Q63HN8 5207 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 LINC00173Q6ZV60 143 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 PHF5AQ7RTV0 110 aaKnown RBP5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 AMELXQ99217 191 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 CTDSP1Q9GZU7 261 aa5.1□□□□□ -1.59
SMARCB1-207ENST00000491967 TGIF2-C20orf24A0A0A6YYL0 155 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 TRBV30A0A0K0K1B3 111 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 FAM168BA1KXE4 195 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 IGIPA6NJ69 53 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 IFI27P40305 119 aaPredicted RBP5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 UBE2D1P51668 147 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 RPL18AQ02543 176 aaKnown RBP5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 RHEBQ15382 184 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 Q8N8P6 123 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
SMARCB1-207ENST00000491967 MT-ND6P03923 174 aa5.08□□□□□ -1.6
SMARCB1-207ENST00000491967 C2orf66Q6UXQ4 117 aa5.08□□□□□ -1.6
SMARCB1-207ENST00000491967 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 S100PP25815 95 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 C1orf137Q5JT78 98 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 C9orf129Q5T035 196 aaKnown RBP5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 DIRC1Q969H9 104 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 CYSLTR1Q9Y271 337 aa5.07□□□□□ -1.6
SMARCB1-207ENST00000491967 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 NDUFC2-KCTD14E9PQ53 114 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 H0Y9J4 135 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 ATP6V1G1O75348 118 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 ORMDL2Q53FV1 153 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 C2orf82Q6UX34 121 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 TEX43Q6ZNM6 134 aa5.06□□□□□ -1.6
SMARCB1-207ENST00000491967 LOC389332A0A1B0GUA5 103 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms