RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
TRA2A-208ENST00000490942 HECTD4Q9Y4D8 3996 aa10.39□□□□□ -0.75
TRA2A-208ENST00000490942 PKD1P98161 4303 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
TRA2A-208ENST00000490942 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 LECT2O14960 151 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 LINC00310P59036 64 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 LINC01561Q8N1V8 128 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 CST9LQ9H4G1 147 aa10.38□□□□□ -0.75
TRA2A-208ENST00000490942 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
TRA2A-208ENST00000490942 APOMO95445 188 aa10.37□□□□□ -0.75
TRA2A-208ENST00000490942 HERVK_113P63121 156 aa10.37□□□□□ -0.75
TRA2A-208ENST00000490942 PMCHL1Q16048 86 aa10.37□□□□□ -0.75
TRA2A-208ENST00000490942 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
TRA2A-208ENST00000490942 C15orf56Q8N910 161 aa10.37□□□□□ -0.75
TRA2A-208ENST00000490942 A0A087WZ39 114 aa10.36□□□□□ -0.75
TRA2A-208ENST00000490942 IGLV5-52A0A0A0MRZ9 124 aa10.36□□□□□ -0.75
TRA2A-208ENST00000490942 PRSS1P07477 247 aa10.36□□□□□ -0.75
TRA2A-208ENST00000490942 MALP21145 153 aa10.35□□□□□ -0.75
TRA2A-208ENST00000490942 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
TRA2A-208ENST00000490942 PACRGQ96M98 296 aaPredicted RBP10.35□□□□□ -0.75
TRA2A-208ENST00000490942 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
TRA2A-208ENST00000490942 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
TRA2A-208ENST00000490942 hDV102S1A0JD36 115 aa10.34□□□□□ -0.75
TRA2A-208ENST00000490942 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
TRA2A-208ENST00000490942 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 TRAV12-1A0A0B4J245 112 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 ZC2HC1BQ5TFG8 222 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 OR10D4PQ8NGN7 298 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 GEMIN7Q9H840 131 aaKnown RBP10.33□□□□□ -0.76
TRA2A-208ENST00000490942 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
TRA2A-208ENST00000490942 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.32□□□□□ -0.76
TRA2A-208ENST00000490942 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
TRA2A-208ENST00000490942 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
TRA2A-208ENST00000490942 F8WDY8 70 aa10.32□□□□□ -0.76
TRA2A-208ENST00000490942 GCSHP23434 173 aa10.32□□□□□ -0.76
TRA2A-208ENST00000490942 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
TRA2A-208ENST00000490942 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
TRA2A-208ENST00000490942 NUPR1O60356 82 aa10.31□□□□□ -0.76
TRA2A-208ENST00000490942 IGLC3P0DOY3 106 aa10.31□□□□□ -0.76
TRA2A-208ENST00000490942 COX6A2Q02221 97 aa10.31□□□□□ -0.76
TRA2A-208ENST00000490942 A0A0J9YXV3 536 aa10.3□□□□□ -0.76
TRA2A-208ENST00000490942 C9orf163Q8N9P6 203 aa10.3□□□□□ -0.76
TRA2A-208ENST00000490942 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
TRA2A-208ENST00000490942 DYNC1H1Q14204 4646 aaKnown RBP10.28□□□□□ -0.76
TRA2A-208ENST00000490942 NDUFA6P56556 154 aa10.28□□□□□ -0.76
TRA2A-208ENST00000490942 HIGD2BQ4VC39 106 aa10.28□□□□□ -0.76
TRA2A-208ENST00000490942 CDKN2A-AS1Q9UH64 79 aa10.28□□□□□ -0.76
TRA2A-208ENST00000490942 PKIGQ9Y2B9 76 aa10.28□□□□□ -0.76
TRA2A-208ENST00000490942 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
TRA2A-208ENST00000490942 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 IGLV4-69A0A075B6H9 119 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 H3BRM9 83 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 SLPIP03973 132 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 LINC00469Q8N7U9 141 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 ORAOV1Q8WV07 137 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 CHAC1Q9BUX1 264 aa10.27□□□□□ -0.77
TRA2A-208ENST00000490942 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
TRA2A-208ENST00000490942 F8VRH5 84 aa10.26□□□□□ -0.77
TRA2A-208ENST00000490942 SYCNQ0VAF6 134 aa10.25□□□□□ -0.77
TRA2A-208ENST00000490942 MAP1LC3CQ9BXW4 147 aa10.25□□□□□ -0.77
TRA2A-208ENST00000490942 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
TRA2A-208ENST00000490942 CDK2AP2O75956 126 aa10.24□□□□□ -0.77
TRA2A-208ENST00000490942 FUSP35637 526 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRA2A-208ENST00000490942 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
TRA2A-208ENST00000490942 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
TRA2A-208ENST00000490942 Q8IZM0 81 aa10.24□□□□□ -0.77
TRA2A-208ENST00000490942 CARD19Q96LW7 228 aa10.24□□□□□ -0.77
TRA2A-208ENST00000490942 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
TRA2A-208ENST00000490942 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
TRA2A-208ENST00000490942 FABP4P15090 132 aa10.23□□□□□ -0.77
TRA2A-208ENST00000490942 ODF1Q14990 250 aa10.23□□□□□ -0.77
TRA2A-208ENST00000490942 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
TRA2A-208ENST00000490942 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
TRA2A-208ENST00000490942 MRPL35Q9NZE8 188 aaKnown RBP10.23□□□□□ -0.77
TRA2A-208ENST00000490942 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
TRA2A-208ENST00000490942 NDUFA1O15239 70 aa10.22□□□□□ -0.77
TRA2A-208ENST00000490942 ZNF22P17026 224 aaPredicted RBP10.22□□□□□ -0.77
TRA2A-208ENST00000490942 CXCL5P42830 114 aa10.22□□□□□ -0.77
TRA2A-208ENST00000490942 Q6ZSA8 131 aa10.22□□□□□ -0.77
TRA2A-208ENST00000490942 PRSS2P07478 247 aa10.21□□□□□ -0.77
TRA2A-208ENST00000490942 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
TRA2A-208ENST00000490942 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
TRA2A-208ENST00000490942 S100A6P06703 90 aa10.2□□□□□ -0.78
TRA2A-208ENST00000490942 PLNP26678 52 aa10.2□□□□□ -0.78
TRA2A-208ENST00000490942 LINC00526Q96FQ7 95 aa10.2□□□□□ -0.78
TRA2A-208ENST00000490942 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
TRA2A-208ENST00000490942 SYS1-DBNDD2H3BUS1 97 aa10.19□□□□□ -0.78
TRA2A-208ENST00000490942 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
TRA2A-208ENST00000490942 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
TRA2A-208ENST00000490942 Q6ZRU5 148 aa10.19□□□□□ -0.78
TRA2A-208ENST00000490942 CKS1BP61024 79 aa10.18□□□□□ -0.78
TRA2A-208ENST00000490942 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
TRA2A-208ENST00000490942 SFTA2Q6UW10 78 aa10.18□□□□□ -0.78
TRA2A-208ENST00000490942 DPM2O94777 84 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms