RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MUC4Q99102 2169 aa8.15□□□□□ -1.1
CRNKL1-204ENST00000490910 C16orf74Q96GX8 76 aa8.15□□□□□ -1.11
CRNKL1-204ENST00000490910 CHD9Q3L8U1 2897 aa8.15□□□□□ -1.11
CRNKL1-204ENST00000490910 TRBV6-4A0A1B0GX49 114 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 ZNF561-AS1K7EIQ3 104 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 MIFP14174 115 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 GNLYP22749 145 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 LINC01600Q96MT4 127 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 FAM208BQ5VWN6 2430 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 C11orf71Q6IPW1 123 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 ADORA2A-AS1P86434 159 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 DIRC1Q969H9 104 aa8.14□□□□□ -1.11
CRNKL1-204ENST00000490910 J3QLI3 93 aa8.13□□□□□ -1.11
CRNKL1-204ENST00000490910 GYPEP15421 78 aa8.13□□□□□ -1.11
CRNKL1-204ENST00000490910 Q6ZSN1 163 aa8.13□□□□□ -1.11
CRNKL1-204ENST00000490910 Q8N814 137 aa8.13□□□□□ -1.11
CRNKL1-204ENST00000490910 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
CRNKL1-204ENST00000490910 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
CRNKL1-204ENST00000490910 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
CRNKL1-204ENST00000490910 RMI2Q96E14 147 aa8.12□□□□□ -1.11
CRNKL1-204ENST00000490910 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
CRNKL1-204ENST00000490910 C10orf99Q6UWK7 81 aa8.12□□□□□ -1.11
CRNKL1-204ENST00000490910 TRBV10-3A0A0K0K1G6 114 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 ATRXP46100 2492 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 BPY2O14599 106 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 FHL2Q14192 279 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 Q6ZQY7 126 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 MAPK1IP1LQ8NDC0 245 aa8.11□□□□□ -1.11
CRNKL1-204ENST00000490910 IGHV4-28A0A0C4DH34 117 aa8.1□□□□□ -1.11
CRNKL1-204ENST00000490910 Q8N3U1 123 aa8.1□□□□□ -1.11
CRNKL1-204ENST00000490910 IGHV4-30-2A0A087WSY4 118 aa8.1□□□□□ -1.11
CRNKL1-204ENST00000490910 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
CRNKL1-204ENST00000490910 DEFB105AQ8NG35 78 aa8.1□□□□□ -1.11
CRNKL1-204ENST00000490910 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 SPAG11BQ08648 103 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 WIPF1O43516 503 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 UNC80Q8N2C7 3258 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 COX7BP24311 80 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
CRNKL1-204ENST00000490910 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
CRNKL1-204ENST00000490910 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
CRNKL1-204ENST00000490910 Q9UF83 564 aa8.07□□□□□ -1.12
CRNKL1-204ENST00000490910 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
CRNKL1-204ENST00000490910 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
CRNKL1-204ENST00000490910 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-204ENST00000490910 SEC61GP60059 68 aa8.06□□□□□ -1.12
CRNKL1-204ENST00000490910 Q6ZVQ6 151 aa8.06□□□□□ -1.12
CRNKL1-204ENST00000490910 A0A087WZ39 114 aa8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 LOC100131303A0A0U1RQF7 123 aa8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 BCE1O60756 84 aa8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 XIRP2A4UGR9 3374 aa8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 DEFB114Q30KQ6 69 aa8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 BEAN1Q3B7T3 259 aa8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 MRPL55Q7Z7F7 128 aaKnown RBP8.05□□□□□ -1.12
CRNKL1-204ENST00000490910 MP68P56378 58 aa8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 CCL24O00175 119 aa8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 Q8IZM0 81 aa8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 FN1P02751 2386 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 COL27A1Q8IZC6 1860 aaPredicted RBP8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 KLK9Q2XQG4 91 aa8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 SONP18583 2426 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 RANBP2P49792 3224 aaKnown RBP8.04□□□□□ -1.12
CRNKL1-204ENST00000490910 DNAH14Q0VDD8 3507 aa8.03□□□□□ -1.12
CRNKL1-204ENST00000490910 TRANK1O15050 2925 aa8.03□□□□□ -1.12
CRNKL1-204ENST00000490910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-204ENST00000490910 LINC00336Q6ZUF6 198 aa8.03□□□□□ -1.12
CRNKL1-204ENST00000490910 CHCHD10Q8WYQ3 142 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-204ENST00000490910 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
CRNKL1-204ENST00000490910 PRYO14603 147 aa8.02□□□□□ -1.13
CRNKL1-204ENST00000490910 USP9XQ93008 2570 aaPredicted RBP8.02□□□□□ -1.13
CRNKL1-204ENST00000490910 CACNA1AO00555 2505 aa8.02□□□□□ -1.13
CRNKL1-204ENST00000490910 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
CRNKL1-204ENST00000490910 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
CRNKL1-204ENST00000490910 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 ZNF843Q8N446 348 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 IGF2RP11717 2491 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 COX17Q14061 63 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 SETD2Q9BYW2 2564 aaPredicted RBP8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 REG3AQ06141 175 aa8.01□□□□□ -1.13
CRNKL1-204ENST00000490910 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 ESRGQ1W209 222 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 LRCOL1A6NCL2 159 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 C3orf84H3BNL1 204 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 CXCL6P80162 114 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 XAGE1AQ9HD64 81 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 ESM1Q9NQ30 184 aa8□□□□□ -1.13
CRNKL1-204ENST00000490910 CDSNQ15517 529 aa7.99□□□□□ -1.13
CRNKL1-204ENST00000490910 CD164L2Q6UWJ8 174 aa7.99□□□□□ -1.13
CRNKL1-204ENST00000490910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-204ENST00000490910 NBEAQ8NFP9 2946 aa7.98□□□□□ -1.13
CRNKL1-204ENST00000490910 CEP295Q9C0D2 2601 aa7.98□□□□□ -1.13
CRNKL1-204ENST00000490910 TLN2Q9Y4G6 2542 aa7.98□□□□□ -1.13
CRNKL1-204ENST00000490910 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms