RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 LINC00482Q8N8I6 264 aa4.52□□□□□ -1.69
FN1-223ENST00000490833 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
FN1-223ENST00000490833 SPATA25Q9BR10 227 aa4.52□□□□□ -1.69
FN1-223ENST00000490833 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
FN1-223ENST00000490833 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
FN1-223ENST00000490833 TRBV10-2A0A0K0K1G8 114 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 GAGE12HA6NDE8 117 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 IBA57-AS1B1ANH7 110 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 H0YGX0 51 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 RPL13AP40429 203 aaKnown RBP4.51□□□□□ -1.69
FN1-223ENST00000490833 TSPEAR-AS2P59090 65 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 COX17Q14061 63 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 WFDC2Q14508 124 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 MRPL23Q16540 153 aaKnown RBP4.51□□□□□ -1.69
FN1-223ENST00000490833 ETDBQ3ZM63 59 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 PRIMA1Q86XR5 153 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 ANKRD29Q8N6D5 301 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 PRO0461Q9UI25 63 aa4.51□□□□□ -1.69
FN1-223ENST00000490833 TEP1Q99973 2627 aaKnown RBP4.5□□□□□ -1.69
FN1-223ENST00000490833 A0A087WZ39 114 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 TRAV13-1A0A0B4J241 112 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 H3BQ85 93 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 SLC25A20O43772 301 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 GIG44P09565 113 aaPredicted RBP4.5□□□□□ -1.69
FN1-223ENST00000490833 SPINK8P0C7L1 97 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 RPL35AP18077 110 aaKnown RBP4.5□□□□□ -1.69
FN1-223ENST00000490833 FHL2Q14192 279 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 C21orf62-AS1Q17RA5 79 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 HIST2H2BCQ6DN03 193 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 HIST2H2BDQ6DRA6 164 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 WFDC9Q8NEX5 89 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 FAM104AQ969W3 186 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 LITAFQ99732 161 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 NAA38Q9BRA0 125 aaKnown RBP4.5□□□□□ -1.69
FN1-223ENST00000490833 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 Q9H8V8 135 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 ICOSQ9Y6W8 199 aa4.5□□□□□ -1.69
FN1-223ENST00000490833 TEX15Q9BXT5 2789 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 IGHV3-38A0A0C4DH36 116 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 FAM240AA0A1B0GVK7 77 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 PLAC8L1A1L4L8 177 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 LY6G6DO95868 133 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 TCL1BO95988 128 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 TRACP01848 142 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 SPART-AS1P0CW21 52 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 LINC01620Q4KN68 170 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 NTM-AS1Q6ZSK4 140 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 COX7B2Q8TF08 81 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 ZNF625Q96I27 306 aaPredicted RBP4.49□□□□□ -1.69
FN1-223ENST00000490833 SORL1Q92673 2214 aa4.49□□□□□ -1.69
FN1-223ENST00000490833 UTP20O75691 2785 aaKnown RBP4.48□□□□□ -1.69
FN1-223ENST00000490833 MYO9AB2RTY4 2548 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 IGHV3-64A0A075B6Q5 118 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 TRAV8-3A0A0A6YYJ7 113 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 A0A1B0GX51 115 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 H3BNG1 76 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 LST1O00453 97 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 COX7A2LO14548 114 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 CRLF1O75462 422 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 ATP5G1P05496 136 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 LINC00694P0DN24 101 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 C6orf226Q5I0X4 101 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 CEMP1Q6PRD7 247 aaPredicted RBP4.48□□□□□ -1.69
FN1-223ENST00000490833 Q8IZM0 81 aa4.48□□□□□ -1.69
FN1-223ENST00000490833 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 C9JAW5 83 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 F5H768 121 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 F8WDY8 70 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 INAFM2P0DMQ5 153 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 DAD1P61803 113 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 C2orf82Q6UX34 121 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 CITED1Q99966 193 aa4.47□□□□□ -1.69
FN1-223ENST00000490833 HIVEP2P31629 2446 aa4.46□□□□□ -1.69
FN1-223ENST00000490833 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 A0A1B0GV72 72 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 A8MZ25 164 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 TRIAP1O43715 76 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 CRPP02741 224 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 DEFB130BP0DP73 79 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 DEFB130AP0DP74 79 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 GYPEP15421 78 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 RPL28P46779 137 aaKnown RBP4.46□□□□□ -1.7
FN1-223ENST00000490833 CKS1BP61024 79 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
FN1-223ENST00000490833 H7C2G1 150 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 NDUFC2O95298 119 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 DNAL4O96015 105 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 PRM2P04554 102 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 LINC00158P58513 81 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 COX6A2Q02221 97 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 GAGE6Q13070 117 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
FN1-223ENST00000490833 DEFB121Q5J5C9 76 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 CFAP161Q6P656 301 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 DEFB104AQ8WTQ1 72 aa4.45□□□□□ -1.7
FN1-223ENST00000490833 UBE2WQ96B02 151 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms