RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MRPL55Q7Z7F7 128 aaKnown RBP7.62□□□□□ -1.19
EXOSC3-207ENST00000490516 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
EXOSC3-207ENST00000490516 PACRGQ96M98 296 aaPredicted RBP7.62□□□□□ -1.19
EXOSC3-207ENST00000490516 USH2AO75445 5202 aa7.62□□□□□ -1.19
EXOSC3-207ENST00000490516 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
EXOSC3-207ENST00000490516 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
EXOSC3-207ENST00000490516 SMIM15Q7Z3B0 74 aa7.61□□□□□ -1.19
EXOSC3-207ENST00000490516 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
EXOSC3-207ENST00000490516 MARVELD1Q9BSK0 173 aa7.61□□□□□ -1.19
EXOSC3-207ENST00000490516 XAGE1AQ9HD64 81 aa7.61□□□□□ -1.19
EXOSC3-207ENST00000490516 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 RAB19A4D1S5 217 aa7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 UPK1BO75841 260 aa7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 UBE2AP49459 152 aa7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 Q5BKY6 102 aa7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 XP32Q5T750 250 aa7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 SFT2D1Q8WV19 159 aa7.6□□□□□ -1.19
EXOSC3-207ENST00000490516 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
EXOSC3-207ENST00000490516 ZNF727A8MUV8 499 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 FCER1GP30273 86 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 KCNRGQ8N5I3 272 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 NUDT10Q8NFP7 164 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 FAM104AQ969W3 186 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 NUDT11Q96G61 164 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 TP73-AS1Q9UF72 201 aa7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 SYNE2Q8WXH0 6885 aaKnown RBP7.58□□□□□ -1.2
EXOSC3-207ENST00000490516 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
EXOSC3-207ENST00000490516 C11orf52Q96A22 123 aa7.57□□□□□ -1.2
EXOSC3-207ENST00000490516 GAGE10A6NGK3 116 aa7.56□□□□□ -1.2
EXOSC3-207ENST00000490516 GNG4P50150 75 aa7.56□□□□□ -1.2
EXOSC3-207ENST00000490516 DAND5Q8N907 189 aa7.56□□□□□ -1.2
EXOSC3-207ENST00000490516 MBD3L1Q8WWY6 194 aa7.56□□□□□ -1.2
EXOSC3-207ENST00000490516 LCE2BO14633 110 aa7.55□□□□□ -1.2
EXOSC3-207ENST00000490516 FAM213BQ8TBF2 198 aa7.55□□□□□ -1.2
EXOSC3-207ENST00000490516 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
EXOSC3-207ENST00000490516 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
EXOSC3-207ENST00000490516 VCYO14598 125 aa7.54□□□□□ -1.2
EXOSC3-207ENST00000490516 TNFRSF6BO95407 300 aa7.54□□□□□ -1.2
EXOSC3-207ENST00000490516 CCL20P78556 96 aa7.54□□□□□ -1.2
EXOSC3-207ENST00000490516 IFITM3Q01628 133 aa7.54□□□□□ -1.2
EXOSC3-207ENST00000490516 SMIM12Q96EX1 92 aa7.54□□□□□ -1.2
EXOSC3-207ENST00000490516 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
EXOSC3-207ENST00000490516 IGLV8-61A0A075B6I0 122 aa7.53□□□□□ -1.2
EXOSC3-207ENST00000490516 RPL39P62891 51 aaKnown RBP7.53□□□□□ -1.2
EXOSC3-207ENST00000490516 PRLHP81277 87 aa7.53□□□□□ -1.2
EXOSC3-207ENST00000490516 FXYD6-FXYD2A0A087WZ82 144 aa7.52□□□□□ -1.21
EXOSC3-207ENST00000490516 TGIF2-C20orf24A0A0A6YYL0 155 aa7.52□□□□□ -1.21
EXOSC3-207ENST00000490516 IFITM10A6NMD0 228 aa7.52□□□□□ -1.21
EXOSC3-207ENST00000490516 SMKR1H3BMG3 65 aa7.52□□□□□ -1.21
EXOSC3-207ENST00000490516 PNRC1Q12796 327 aaPredicted RBP7.52□□□□□ -1.21
EXOSC3-207ENST00000490516 PCOTHQ58A44 107 aa7.52□□□□□ -1.21
EXOSC3-207ENST00000490516 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
EXOSC3-207ENST00000490516 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
EXOSC3-207ENST00000490516 TMEM18Q96B42 140 aa7.5□□□□□ -1.21
EXOSC3-207ENST00000490516 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
EXOSC3-207ENST00000490516 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
EXOSC3-207ENST00000490516 BIN3Q9NQY0 253 aa7.5□□□□□ -1.21
EXOSC3-207ENST00000490516 MACF1Q9UPN3 7388 aaKnown RBP7.49□□□□□ -1.21
EXOSC3-207ENST00000490516 RAB4AP20338 218 aa7.49□□□□□ -1.21
EXOSC3-207ENST00000490516 HBBP68871 147 aa7.49□□□□□ -1.21
EXOSC3-207ENST00000490516 Q8NBF4 154 aa7.49□□□□□ -1.21
EXOSC3-207ENST00000490516 GNG13Q9P2W3 67 aa7.49□□□□□ -1.21
EXOSC3-207ENST00000490516 H2AFB1P0C5Y9 115 aa7.48□□□□□ -1.21
EXOSC3-207ENST00000490516 SUMO2P61956 95 aaKnown RBP7.48□□□□□ -1.21
EXOSC3-207ENST00000490516 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
EXOSC3-207ENST00000490516 IGKV2-28A0A075B6P5 120 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 IGKV2D-28P01615 120 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 CKS1BP61024 79 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 NRACQ8N912 160 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 MANBALQ9NQG1 85 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 NDUFA12Q9UI09 145 aa7.47□□□□□ -1.21
EXOSC3-207ENST00000490516 K7EN84 100 aa7.46□□□□□ -1.22
EXOSC3-207ENST00000490516 MRPS36P82909 103 aaKnown RBP7.46□□□□□ -1.22
EXOSC3-207ENST00000490516 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.22
EXOSC3-207ENST00000490516 TMEM191AQ9H0A3 160 aa7.46□□□□□ -1.22
EXOSC3-207ENST00000490516 SCO1O75880 301 aa7.45□□□□□ -1.22
EXOSC3-207ENST00000490516 SPINK1P00995 79 aa7.45□□□□□ -1.22
EXOSC3-207ENST00000490516 PRSS2P07478 247 aa7.45□□□□□ -1.22
EXOSC3-207ENST00000490516 SPANXA1Q9NS26 97 aa7.45□□□□□ -1.22
EXOSC3-207ENST00000490516 MED9Q9NWA0 146 aa7.45□□□□□ -1.22
EXOSC3-207ENST00000490516 UMAD1C9J7I0 102 aa7.44□□□□□ -1.22
EXOSC3-207ENST00000490516 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
EXOSC3-207ENST00000490516 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
EXOSC3-207ENST00000490516 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
EXOSC3-207ENST00000490516 S100ZQ8WXG8 99 aa7.44□□□□□ -1.22
EXOSC3-207ENST00000490516 A6NJY4 79 aa7.43□□□□□ -1.22
EXOSC3-207ENST00000490516 Q8N377 158 aa7.43□□□□□ -1.22
EXOSC3-207ENST00000490516 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
EXOSC3-207ENST00000490516 IGLV5-37A0A075B6J1 123 aa7.42□□□□□ -1.22
EXOSC3-207ENST00000490516 TMEM238C9JI98 176 aa7.42□□□□□ -1.22
EXOSC3-207ENST00000490516 GIPP09681 153 aaPredicted RBP7.42□□□□□ -1.22
EXOSC3-207ENST00000490516 CBLN2Q8IUK8 224 aa7.42□□□□□ -1.22
EXOSC3-207ENST00000490516 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
EXOSC3-207ENST00000490516 ARPC5O15511 151 aa7.41□□□□□ -1.22
EXOSC3-207ENST00000490516 GATCO43716 136 aaKnown RBP7.41□□□□□ -1.22
EXOSC3-207ENST00000490516 Q8IZM0 81 aa7.41□□□□□ -1.22
EXOSC3-207ENST00000490516 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms