RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
PDLIM1-203ENST00000490391 CENPXA8MT69 81 aa3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 NDUFC2-KCTD14E9PQ53 114 aa3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 PLA2G10O15496 165 aa3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 PSMG3Q9BT73 122 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 TPPP3Q9BW30 176 aa3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 ACTR3CQ9C0K3 210 aaPredicted RBP3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 UBE2D4Q9Y2X8 147 aa3.85□□□□□ -1.79
PDLIM1-203ENST00000490391 MPC2O95563 127 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 TRGC1P0CF51 173 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 AKR1C3P42330 323 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 KIAA0087Q14695 138 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 MRAP2Q96G30 205 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 KIR2DL4Q99706 377 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 TP73-AS1Q9UF72 201 aa3.84□□□□□ -1.79
PDLIM1-203ENST00000490391 TRAV13-1A0A0B4J241 112 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 CCDC160A6NGH7 325 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 INMT-MINDY4F8WBC2 141 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 I3L3M4 83 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 MBP02144 154 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 IL7P13232 177 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 S100A5P33763 92 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 H2BFSP57053 126 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 DEFA1P59665 94 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 SERF2P84101 59 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 MRPL55Q7Z7F7 128 aaKnown RBP3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 PACRGQ96M98 296 aaPredicted RBP3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 TCEAL7Q9BRU2 100 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 RNASE7Q9H1E1 156 aaKnown RBP3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 CYTL1Q9NRR1 136 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 TNFSF18Q9UNG2 199 aa3.83□□□□□ -1.8
PDLIM1-203ENST00000490391 CTXND1A0A1B0GTU2 59 aa3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 LYRM1O43325 122 aa3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 FHITP49789 147 aa3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 C2orf82Q6UX34 121 aa3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 COX6B2Q6YFQ2 88 aa3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 BAGE2Q86Y30 109 aa3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 CSDC2Q9Y534 153 aaKnown RBP3.82□□□□□ -1.8
PDLIM1-203ENST00000490391 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 C7orf77A4D0Y5 90 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 PMCHP20382 165 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 FOXA3P55318 350 aaPredicted RBP3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 LYZL1Q6UWQ5 148 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 Q6ZUT4 128 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 LINC00167Q96N53 147 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 CNFNQ9BYD5 112 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 XAGE1AQ9HD64 81 aa3.81□□□□□ -1.8
PDLIM1-203ENST00000490391 RPL37AP8A6NKH3 93 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 F2Z2F3 143 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 UPK1BO75841 260 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 S100A9P06702 114 aaKnown RBP3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 UBE2AP49459 152 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 Q8N377 158 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 LINC00469Q8N7U9 141 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 Q8NBF4 154 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 STOML3Q8TAV4 291 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 FAM104AQ969W3 186 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 PLEKHB2Q96CS7 222 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 FAM210AQ96ND0 272 aa3.8□□□□□ -1.8
PDLIM1-203ENST00000490391 ZNF727A8MUV8 499 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 SPINK1P00995 79 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 PET100P0DJ07 73 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 RPS20P60866 119 aaKnown RBP3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 CST9LP1Q5W188 147 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 C9orf62Q8N4C0 152 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 MARVELD1Q9BSK0 173 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 NDUFA12Q9UI09 145 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 KMT2DO14686 5537 aa3.79□□□□□ -1.8
PDLIM1-203ENST00000490391 TRBV27A0A0K0K1C4 114 aa3.78□□□□□ -1.8
PDLIM1-203ENST00000490391 NPSP0C0P6 89 aa3.78□□□□□ -1.8
PDLIM1-203ENST00000490391 PRLHP81277 87 aa3.78□□□□□ -1.8
PDLIM1-203ENST00000490391 TEX261Q6UWH6 196 aa3.78□□□□□ -1.8
PDLIM1-203ENST00000490391 MAP1LC3B2A6NCE7 125 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 GAGE10A6NGK3 116 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 KRTAP10-5P60370 271 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 PNRC1Q12796 327 aaPredicted RBP3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 TWIST1Q15672 202 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 FAM19A2Q8N3H0 131 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 MAP1LC3BQ9GZQ8 125 aa3.77□□□□□ -1.81
PDLIM1-203ENST00000490391 PAGE4O60829 102 aa3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 NOL3O60936 208 aaKnown RBP3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 IFNA1P01562 189 aa3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 MT2AP02795 61 aa3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 RPL35P42766 123 aaKnown RBP3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 CCDC32Q9BV29 185 aa3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 TIMM21Q9BVV7 248 aa3.76□□□□□ -1.81
PDLIM1-203ENST00000490391 RAB19A4D1S5 217 aa3.75□□□□□ -1.81
PDLIM1-203ENST00000490391 RPL32P62910 135 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms