RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TRAV1-1A0A0B4J248 108 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 A0A1B0GV90 55 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 I3L3M4 83 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 TCAPO15273 167 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 TSHBP01222 138 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 NUDT10Q8NFP7 164 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 TSKUQ8WUA8 353 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 MRAP2Q96G30 205 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
USP39-216ENST00000490193 C1orf196B1AJZ1 125 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 COX7A2LO14548 114 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 BCL2L11O43521 198 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 PMCHP20382 165 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
USP39-216ENST00000490193 SRSF3P84103 164 aaKnown RBP4.92□□□□□ -1.62
USP39-216ENST00000490193 PRR4Q16378 134 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 NUDT11Q96G61 164 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 GNG13Q9P2W3 67 aa4.92□□□□□ -1.62
USP39-216ENST00000490193 PDE6DO43924 150 aa4.91□□□□□ -1.62
USP39-216ENST00000490193 MALP21145 153 aa4.91□□□□□ -1.62
USP39-216ENST00000490193 S100PP25815 95 aa4.91□□□□□ -1.62
USP39-216ENST00000490193 FOXA3P55318 350 aaPredicted RBP4.91□□□□□ -1.62
USP39-216ENST00000490193 IFITM2Q01629 132 aa4.91□□□□□ -1.62
USP39-216ENST00000490193 RPL18AQ02543 176 aaKnown RBP4.91□□□□□ -1.62
USP39-216ENST00000490193 KRTAP11-1Q8IUC1 163 aa4.91□□□□□ -1.62
USP39-216ENST00000490193 RPP21Q9H633 154 aaKnown RBP4.91□□□□□ -1.62
USP39-216ENST00000490193 CSDC2Q9Y534 153 aaKnown RBP4.91□□□□□ -1.62
USP39-216ENST00000490193 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.62
USP39-216ENST00000490193 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.63
USP39-216ENST00000490193 C7orf77A4D0Y5 90 aa4.9□□□□□ -1.63
USP39-216ENST00000490193 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
USP39-216ENST00000490193 ST20Q9HBF5 79 aa4.9□□□□□ -1.63
USP39-216ENST00000490193 TMEM242Q9NWH2 141 aa4.9□□□□□ -1.63
USP39-216ENST00000490193 MRPL35Q9NZE8 188 aaKnown RBP4.9□□□□□ -1.63
USP39-216ENST00000490193 CARHSP1Q9Y2V2 147 aaKnown RBP4.9□□□□□ -1.63
USP39-216ENST00000490193 A0A087WZ39 114 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 HMSDA8MTL9 139 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 SMLR1H3BR10 107 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 TEX46H3BTG2 121 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 LINC00614P0C842 121 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 TLX1NBP0CAT3 122 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 UBE2D1P51668 147 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 LBHQ53QV2 105 aaPredicted RBP4.89□□□□□ -1.63
USP39-216ENST00000490193 OR10D4PQ8NGN7 298 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
USP39-216ENST00000490193 ALKBH7Q9BT30 221 aaPredicted RBP4.89□□□□□ -1.63
USP39-216ENST00000490193 RNASE7Q9H1E1 156 aaKnown RBP4.89□□□□□ -1.63
USP39-216ENST00000490193 MED9Q9NWA0 146 aa4.89□□□□□ -1.63
USP39-216ENST00000490193 KANTRA0A1W2PQU2 76 aa4.88□□□□□ -1.63
USP39-216ENST00000490193 K7EN84 100 aa4.88□□□□□ -1.63
USP39-216ENST00000490193 SMAGPQ0VAQ4 97 aa4.88□□□□□ -1.63
USP39-216ENST00000490193 IMMP2LQ96T52 175 aa4.88□□□□□ -1.63
USP39-216ENST00000490193 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
USP39-216ENST00000490193 A0A1B0GW15 77 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 FAM168BA1KXE4 195 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 OCC1Q8TAD7 63 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 C2orf88Q9BSF0 95 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
USP39-216ENST00000490193 TRAV13-1A0A0B4J241 112 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 A8MWL6 223 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 NDUFA1O15239 70 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 SMIM6P0DI80 62 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 TMEM241Q24JQ0 296 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 CT83Q5H943 113 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 FAM231DQ6ZW35 169 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 TMEM191AQ9H0A3 160 aa4.86□□□□□ -1.63
USP39-216ENST00000490193 GEMIN7Q9H840 131 aaKnown RBP4.86□□□□□ -1.63
USP39-216ENST00000490193 IGHV3OR16-9A0A0B4J2B5 98 aa4.85□□□□□ -1.63
USP39-216ENST00000490193 M0QXV9 152 aa4.85□□□□□ -1.63
USP39-216ENST00000490193 VCYO14598 125 aa4.85□□□□□ -1.63
USP39-216ENST00000490193 AKR1D1P51857 326 aa4.85□□□□□ -1.63
USP39-216ENST00000490193 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
USP39-216ENST00000490193 Q6ZUT4 128 aa4.85□□□□□ -1.63
USP39-216ENST00000490193 FAM19A5Q7Z5A7 132 aaPredicted RBP4.85□□□□□ -1.63
USP39-216ENST00000490193 SMDT1Q9H4I9 107 aa4.85□□□□□ -1.63
USP39-216ENST00000490193 FCER1GP30273 86 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 UBE2BP63146 152 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 C10orf25Q5T742 122 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 ORAOV1Q8WV07 137 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 C6orf48Q9UBA6 75 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
USP39-216ENST00000490193 A0A1B0GUT8 65 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 ZNF861PO60384 105 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 PPP1R17O96001 155 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
USP39-216ENST00000490193 BLOC1S1P78537 153 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 UNQ6190/PRO20217Q6UXQ8 127 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 AMN1Q8IY45 258 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 NRACQ8N912 160 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 FAM104AQ969W3 186 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 TMEM18Q96B42 140 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 BORCS7Q96B45 105 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 KIR2DL4Q99706 377 aa4.83□□□□□ -1.64
USP39-216ENST00000490193 TMEM250H0YL14 139 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms