RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
HMG20B-213ENST00000488973 DYNLRB2Q8TF09 96 aa13.94□□□□□ -0.18
HMG20B-213ENST00000488973 FSHBP01225 129 aa13.93□□□□□ -0.18
HMG20B-213ENST00000488973 DSCR8Q96T75 97 aa13.93□□□□□ -0.18
HMG20B-213ENST00000488973 TRBV10-1A0A0K0K1A3 114 aa13.93□□□□□ -0.18
HMG20B-213ENST00000488973 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
HMG20B-213ENST00000488973 IL17DQ8TAD2 202 aa13.93□□□□□ -0.18
HMG20B-213ENST00000488973 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
HMG20B-213ENST00000488973 CYSTM1Q9H1C7 97 aa13.93□□□□□ -0.18
HMG20B-213ENST00000488973 DAZ2Q13117 558 aaKnown RBP13.92□□□□□ -0.18
HMG20B-213ENST00000488973 DEFB114Q30KQ6 69 aa13.92□□□□□ -0.18
HMG20B-213ENST00000488973 DAZ4Q86SG3 579 aaKnown RBP13.92□□□□□ -0.18
HMG20B-213ENST00000488973 DAZ3Q9NR90 486 aaKnown RBP13.92□□□□□ -0.18
HMG20B-213ENST00000488973 SEC61GP60059 68 aa13.92□□□□□ -0.18
HMG20B-213ENST00000488973 C4orf3Q8WVX3 66 aa13.91□□□□□ -0.18
HMG20B-213ENST00000488973 CDC42SE2Q9NRR3 84 aa13.91□□□□□ -0.18
HMG20B-213ENST00000488973 EPG5Q9HCE0 2579 aa13.91□□□□□ -0.18
HMG20B-213ENST00000488973 NTM-AS1Q6ZSK4 140 aa13.91□□□□□ -0.18
HMG20B-213ENST00000488973 UPK3BQ9BT76 320 aa13.91□□□□□ -0.18
HMG20B-213ENST00000488973 K7EQD1 137 aa13.9□□□□□ -0.18
HMG20B-213ENST00000488973 XCL2Q9UBD3 114 aa13.9□□□□□ -0.18
HMG20B-213ENST00000488973 TRGV1A0A0A0MS02 117 aa13.9□□□□□ -0.18
HMG20B-213ENST00000488973 BAALC-AS2P0C853 105 aa13.9□□□□□ -0.18
HMG20B-213ENST00000488973 KRTAP10-9P60411 292 aa13.89□□□□□ -0.19
HMG20B-213ENST00000488973 C1orf43Q9BWL3 253 aa13.89□□□□□ -0.19
HMG20B-213ENST00000488973 FAM222AQ5U5X8 452 aa13.89□□□□□ -0.19
HMG20B-213ENST00000488973 SERP2Q8N6R1 65 aa13.89□□□□□ -0.19
HMG20B-213ENST00000488973 PF4P02776 101 aa13.88□□□□□ -0.19
HMG20B-213ENST00000488973 RPL18AQ02543 176 aaKnown RBP13.88□□□□□ -0.19
HMG20B-213ENST00000488973 DEFB113Q30KQ7 82 aa13.88□□□□□ -0.19
HMG20B-213ENST00000488973 C1orf158Q8N1D5 194 aa13.88□□□□□ -0.19
HMG20B-213ENST00000488973 MAPK1IP1LQ8NDC0 245 aa13.88□□□□□ -0.19
HMG20B-213ENST00000488973 HIST2H2BCQ6DN03 193 aa13.87□□□□□ -0.19
HMG20B-213ENST00000488973 HIST2H2BDQ6DRA6 164 aa13.87□□□□□ -0.19
HMG20B-213ENST00000488973 C22orf24Q9Y442 160 aa13.86□□□□□ -0.19
HMG20B-213ENST00000488973 TRAV13-2A0A0B4J235 113 aa13.86□□□□□ -0.19
HMG20B-213ENST00000488973 PFN2P35080 140 aa13.86□□□□□ -0.19
HMG20B-213ENST00000488973 LRRK2Q5S007 2527 aa13.86□□□□□ -0.19
HMG20B-213ENST00000488973 FAM208BQ5VWN6 2430 aa13.86□□□□□ -0.19
HMG20B-213ENST00000488973 FBN2P35556 2912 aa13.85□□□□□ -0.19
HMG20B-213ENST00000488973 RPL28P46779 137 aaKnown RBP13.85□□□□□ -0.19
HMG20B-213ENST00000488973 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
HMG20B-213ENST00000488973 FAM218AQ96MZ4 157 aa13.85□□□□□ -0.19
HMG20B-213ENST00000488973 MXRA5Q9NR99 2828 aa13.85□□□□□ -0.19
HMG20B-213ENST00000488973 STHQ8IWL8 128 aa13.85□□□□□ -0.19
HMG20B-213ENST00000488973 INAFM2P0DMQ5 153 aa13.84□□□□□ -0.19
HMG20B-213ENST00000488973 ANKRD17O75179 2603 aaKnown RBP13.84□□□□□ -0.19
HMG20B-213ENST00000488973 NDUFC2-KCTD14E9PQ53 114 aa13.84□□□□□ -0.19
HMG20B-213ENST00000488973 KHDC1LQ5JSQ8 128 aa13.84□□□□□ -0.19
HMG20B-213ENST00000488973 LINC00336Q6ZUF6 198 aa13.84□□□□□ -0.19
HMG20B-213ENST00000488973 Q96MF0 132 aa13.84□□□□□ -0.19
HMG20B-213ENST00000488973 ZANQ9Y493 2812 aa13.84□□□□□ -0.19
HMG20B-213ENST00000488973 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.19
HMG20B-213ENST00000488973 Q6ZTI0 123 aa13.83□□□□□ -0.19
HMG20B-213ENST00000488973 TMEM86BQ8N661 226 aa13.83□□□□□ -0.2
HMG20B-213ENST00000488973 CR1P17927 2039 aa13.83□□□□□ -0.2
HMG20B-213ENST00000488973 UTP20O75691 2785 aaKnown RBP13.83□□□□□ -0.2
HMG20B-213ENST00000488973 UBE2L6O14933 153 aa13.82□□□□□ -0.2
HMG20B-213ENST00000488973 IGHV4-31P0DP07 118 aa13.82□□□□□ -0.2
HMG20B-213ENST00000488973 TMEM243Q9BU79 118 aa13.82□□□□□ -0.2
HMG20B-213ENST00000488973 USP9YO00507 2555 aaPredicted RBP13.82□□□□□ -0.2
HMG20B-213ENST00000488973 CRPP02741 224 aa13.81□□□□□ -0.2
HMG20B-213ENST00000488973 V9GYY9 64 aa13.81□□□□□ -0.2
HMG20B-213ENST00000488973 OVOL2Q9BRP0 275 aa13.8□□□□□ -0.2
HMG20B-213ENST00000488973 COX7B2Q8TF08 81 aa13.8□□□□□ -0.2
HMG20B-213ENST00000488973 EPM2AB3EWF7 344 aa13.78□□□□□ -0.2
HMG20B-213ENST00000488973 MIR7-3HGQ8N6C7 128 aa13.78□□□□□ -0.2
HMG20B-213ENST00000488973 LINC00337Q8N6G1 96 aa13.78□□□□□ -0.2
HMG20B-213ENST00000488973 SND1-IT1Q9HBX3 110 aa13.78□□□□□ -0.2
HMG20B-213ENST00000488973 CSMD2Q7Z408 3487 aa13.77□□□□□ -0.2
HMG20B-213ENST00000488973 IGKV2-28A0A075B6P5 120 aa13.77□□□□□ -0.21
HMG20B-213ENST00000488973 IGKV2D-28P01615 120 aa13.77□□□□□ -0.21
HMG20B-213ENST00000488973 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
HMG20B-213ENST00000488973 NDUFC2O95298 119 aa13.76□□□□□ -0.21
HMG20B-213ENST00000488973 PLA2G2AP14555 144 aa13.76□□□□□ -0.21
HMG20B-213ENST00000488973 Q9HAA7 133 aa13.76□□□□□ -0.21
HMG20B-213ENST00000488973 PKIGQ9Y2B9 76 aa13.76□□□□□ -0.21
HMG20B-213ENST00000488973 J3QKU1 62 aa13.75□□□□□ -0.21
HMG20B-213ENST00000488973 NOP10Q9NPE3 64 aaKnown RBP13.75□□□□□ -0.21
HMG20B-213ENST00000488973 PTPN13Q12923 2485 aa13.74□□□□□ -0.21
HMG20B-213ENST00000488973 DNAL4O96015 105 aa13.73□□□□□ -0.21
HMG20B-213ENST00000488973 H0YGX0 51 aa13.73□□□□□ -0.21
HMG20B-213ENST00000488973 SMIM11BQ8TCY0 68 aa13.73□□□□□ -0.21
HMG20B-213ENST00000488973 TRBV6-4A0A1B0GX49 114 aa13.72□□□□□ -0.21
HMG20B-213ENST00000488973 TOMM7Q9P0U1 55 aa13.72□□□□□ -0.21
HMG20B-213ENST00000488973 MYO9AB2RTY4 2548 aa13.72□□□□□ -0.21
HMG20B-213ENST00000488973 LINC00158P58513 81 aa13.71□□□□□ -0.21
HMG20B-213ENST00000488973 AKAP9Q99996 3911 aa13.71□□□□□ -0.21
HMG20B-213ENST00000488973 A0A087WYN8 130 aa13.71□□□□□ -0.22
HMG20B-213ENST00000488973 C16orf74Q96GX8 76 aa13.71□□□□□ -0.22
HMG20B-213ENST00000488973 IBA57-AS1B1ANH7 110 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 CCL18P55774 89 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 SERP1Q9Y6X1 66 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 POLQO75417 2590 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 NAV2Q8IVL1 2488 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 PLAC8L1A1L4L8 177 aa13.7□□□□□ -0.22
HMG20B-213ENST00000488973 CHD6Q8TD26 2715 aa13.69□□□□□ -0.22
HMG20B-213ENST00000488973 TRGV2A0A075B6R0 118 aa13.69□□□□□ -0.22
HMG20B-213ENST00000488973 LOC100131303A0A0U1RQF7 123 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms