RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 HUWE1Q7Z6Z7 4374 aaKnown RBP13.93□□□□□ -0.18
ATP1A1-208ENST00000488733 TRAV8-3A0A0A6YYJ7 113 aa13.93□□□□□ -0.18
ATP1A1-208ENST00000488733 GCSHP23434 173 aa13.93□□□□□ -0.18
ATP1A1-208ENST00000488733 LELP1Q5T871 98 aa13.93□□□□□ -0.18
ATP1A1-208ENST00000488733 Q6ZTC4 211 aa13.93□□□□□ -0.18
ATP1A1-208ENST00000488733 SPANXB1Q9NS25 103 aaPredicted RBP13.9□□□□□ -0.18
ATP1A1-208ENST00000488733 IGLV5-39A0A0G2JS06 123 aa13.9□□□□□ -0.18
ATP1A1-208ENST00000488733 CCL25O15444 150 aa13.9□□□□□ -0.18
ATP1A1-208ENST00000488733 PTTG1IPP53801 180 aa13.89□□□□□ -0.19
ATP1A1-208ENST00000488733 SRSF9Q13242 221 aaKnown RBP eCLIP13.89□□□□□ -0.19
ATP1A1-208ENST00000488733 DNAH9Q9NYC9 4486 aa13.88□□□□□ -0.19
ATP1A1-208ENST00000488733 ZFAND6Q6FIF0 208 aa13.88□□□□□ -0.19
ATP1A1-208ENST00000488733 NDUFA12Q9UI09 145 aa13.88□□□□□ -0.19
ATP1A1-208ENST00000488733 LINC00959A0A1B0GUT2 108 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 SMIM1B2RUZ4 78 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 FXYD2P54710 66 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 NANOS2P60321 138 aaKnown RBP13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 TAX1BP3O14907 124 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 SS18Q15532 418 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 LYPD5Q6UWN5 251 aa13.87□□□□□ -0.19
ATP1A1-208ENST00000488733 DEFB131BA0A096LNP1 70 aa13.86□□□□□ -0.19
ATP1A1-208ENST00000488733 COX11Q9Y6N1 276 aa13.86□□□□□ -0.19
ATP1A1-208ENST00000488733 MEGF8Q7Z7M0 2845 aa13.86□□□□□ -0.19
ATP1A1-208ENST00000488733 A0A0J9YXY3 114 aa13.84□□□□□ -0.19
ATP1A1-208ENST00000488733 SMIM13P0DJ93 91 aa13.84□□□□□ -0.19
ATP1A1-208ENST00000488733 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
ATP1A1-208ENST00000488733 IGHV3OR16-9A0A0B4J2B5 98 aa13.84□□□□□ -0.19
ATP1A1-208ENST00000488733 TMEM238C9JI98 176 aa13.84□□□□□ -0.19
ATP1A1-208ENST00000488733 TMEM238LA0A1B0GVL6 79 aa13.83□□□□□ -0.2
ATP1A1-208ENST00000488733 A6NJY4 79 aa13.83□□□□□ -0.2
ATP1A1-208ENST00000488733 NDUFA1O15239 70 aa13.83□□□□□ -0.2
ATP1A1-208ENST00000488733 TRAV10A0A0B4J240 114 aa13.81□□□□□ -0.2
ATP1A1-208ENST00000488733 ANGP03950 147 aaKnown RBP13.81□□□□□ -0.2
ATP1A1-208ENST00000488733 A0A087WZ39 114 aa13.81□□□□□ -0.2
ATP1A1-208ENST00000488733 K7EP13 123 aa13.81□□□□□ -0.2
ATP1A1-208ENST00000488733 NHLRC4P0CG21 123 aaPredicted RBP13.81□□□□□ -0.2
ATP1A1-208ENST00000488733 LINC00269Q8N2A0 174 aa13.81□□□□□ -0.2
ATP1A1-208ENST00000488733 IGHV3-30P01768 117 aa13.8□□□□□ -0.2
ATP1A1-208ENST00000488733 IGHV3-30-5P0DP03 117 aa13.8□□□□□ -0.2
ATP1A1-208ENST00000488733 NHP2Q9NX24 153 aaKnown RBP13.8□□□□□ -0.2
ATP1A1-208ENST00000488733 STAB2Q8WWQ8 2551 aa13.79□□□□□ -0.2
ATP1A1-208ENST00000488733 TIMM17BO60830 172 aa13.79□□□□□ -0.2
ATP1A1-208ENST00000488733 REG3AQ06141 175 aa13.79□□□□□ -0.2
ATP1A1-208ENST00000488733 LINC01561Q8N1V8 128 aa13.79□□□□□ -0.2
ATP1A1-208ENST00000488733 Q6ZVH6 145 aa13.78□□□□□ -0.2
ATP1A1-208ENST00000488733 PRKDCP78527 4128 aaKnown RBP13.78□□□□□ -0.2
ATP1A1-208ENST00000488733 A0A1B0GWB2 263 aa13.77□□□□□ -0.21
ATP1A1-208ENST00000488733 C9orf118A6NHY6 69 aa13.77□□□□□ -0.21
ATP1A1-208ENST00000488733 HERV-K104P63124 156 aa13.77□□□□□ -0.21
ATP1A1-208ENST00000488733 CIRBPQ14011 172 aaKnown RBP13.77□□□□□ -0.21
ATP1A1-208ENST00000488733 Q9H8V8 135 aa13.77□□□□□ -0.21
ATP1A1-208ENST00000488733 COL7A1Q02388 2944 aa13.77□□□□□ -0.21
ATP1A1-208ENST00000488733 XCL1P47992 114 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 COX7B2Q8TF08 81 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 LITAFQ99732 161 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 CD164L2Q6UWJ8 174 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 C5orf38Q86SI9 138 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 C15orf53Q8NAA6 179 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 RAB37Q96AX2 223 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 SPANXDQ9BXN6 97 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 SPANXCQ9NY87 97 aa13.76□□□□□ -0.21
ATP1A1-208ENST00000488733 Q8N3U1 123 aa13.75□□□□□ -0.21
ATP1A1-208ENST00000488733 ZNF625Q96I27 306 aaPredicted RBP13.75□□□□□ -0.21
ATP1A1-208ENST00000488733 RPL24P83731 157 aaKnown RBP13.74□□□□□ -0.21
ATP1A1-208ENST00000488733 ESRGQ1W209 222 aa13.74□□□□□ -0.21
ATP1A1-208ENST00000488733 PRR34Q9NV39 138 aa13.74□□□□□ -0.21
ATP1A1-208ENST00000488733 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
ATP1A1-208ENST00000488733 SFTA2Q6UW10 78 aa13.73□□□□□ -0.21
ATP1A1-208ENST00000488733 K7ERJ3 54 aa13.72□□□□□ -0.21
ATP1A1-208ENST00000488733 VAMP3Q15836 100 aa13.72□□□□□ -0.21
ATP1A1-208ENST00000488733 MIAQ16674 131 aa13.72□□□□□ -0.21
ATP1A1-208ENST00000488733 MUSTN1Q8IVN3 82 aa13.72□□□□□ -0.21
ATP1A1-208ENST00000488733 KLK12Q9UKR0 248 aa13.72□□□□□ -0.21
ATP1A1-208ENST00000488733 COX7A2LO14548 114 aa13.71□□□□□ -0.21
ATP1A1-208ENST00000488733 ADAMTSL4-AS1Q5T5F5 129 aa13.71□□□□□ -0.21
ATP1A1-208ENST00000488733 TOMM7Q9P0U1 55 aa13.71□□□□□ -0.21
ATP1A1-208ENST00000488733 H3BUT2 72 aa13.7□□□□□ -0.22
ATP1A1-208ENST00000488733 PRSS2P07478 247 aa13.7□□□□□ -0.22
ATP1A1-208ENST00000488733 IFITM1P13164 125 aa13.7□□□□□ -0.22
ATP1A1-208ENST00000488733 WFDC10BQ8IUB3 73 aa13.7□□□□□ -0.22
ATP1A1-208ENST00000488733 TRAV8-4A0A0B4J246 113 aa13.69□□□□□ -0.22
ATP1A1-208ENST00000488733 IGHV3-33P01772 117 aa13.69□□□□□ -0.22
ATP1A1-208ENST00000488733 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.68□□□□□ -0.22
ATP1A1-208ENST00000488733 CRPP02741 224 aa13.68□□□□□ -0.22
ATP1A1-208ENST00000488733 COPS9Q8WXC6 57 aa13.68□□□□□ -0.22
ATP1A1-208ENST00000488733 IGLV10-54A0A075B6I4 117 aa13.67□□□□□ -0.22
ATP1A1-208ENST00000488733 A4D1N5 150 aa13.67□□□□□ -0.22
ATP1A1-208ENST00000488733 C6orf226Q5I0X4 101 aa13.67□□□□□ -0.22
ATP1A1-208ENST00000488733 MEIG1Q5JSS6 88 aa13.67□□□□□ -0.22
ATP1A1-208ENST00000488733 ENHOQ6UWT2 76 aa13.67□□□□□ -0.22
ATP1A1-208ENST00000488733 Q8IZM0 81 aa13.67□□□□□ -0.22
ATP1A1-208ENST00000488733 IGLL5B9A064 214 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 APOMO95445 188 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 CFC1BP0CG36 223 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 CFC1P0CG37 223 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 MALP21145 153 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 FOXI1Q12951 378 aa13.66□□□□□ -0.22
ATP1A1-208ENST00000488733 UBE2V1Q13404 147 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms