RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ATP5L2Q7Z4Y8 100 aa12.01□□□□□ -0.49
CD55-209ENST00000488171 A0A1W2PNN7 141 aa12□□□□□ -0.49
CD55-209ENST00000488171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
CD55-209ENST00000488171 SPAG11BQ08648 103 aa12□□□□□ -0.49
CD55-209ENST00000488171 IGHV3OR16-9A0A0B4J2B5 98 aa11.99□□□□□ -0.49
CD55-209ENST00000488171 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
CD55-209ENST00000488171 OR10D4PQ8NGN7 298 aa11.99□□□□□ -0.49
CD55-209ENST00000488171 LINC01600Q96MT4 127 aa11.99□□□□□ -0.49
CD55-209ENST00000488171 Q6ZRP5 223 aa11.98□□□□□ -0.49
CD55-209ENST00000488171 TMEM136Q6ZRR5 245 aa11.98□□□□□ -0.49
CD55-209ENST00000488171 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
CD55-209ENST00000488171 TNXBP22105 4242 aa11.97□□□□□ -0.49
CD55-209ENST00000488171 A0A0J9YXV3 536 aa11.96□□□□□ -0.49
CD55-209ENST00000488171 IFITM10A6NMD0 228 aa11.96□□□□□ -0.49
CD55-209ENST00000488171 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
CD55-209ENST00000488171 RNF151Q2KHN1 245 aa11.96□□□□□ -0.49
CD55-209ENST00000488171 SPINK6Q6UWN8 80 aa11.96□□□□□ -0.49
CD55-209ENST00000488171 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
CD55-209ENST00000488171 RPL18AQ02543 176 aaKnown RBP11.95□□□□□ -0.5
CD55-209ENST00000488171 UBR4Q5T4S7 5183 aa11.95□□□□□ -0.5
CD55-209ENST00000488171 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
CD55-209ENST00000488171 RAB5AP20339 215 aa11.94□□□□□ -0.5
CD55-209ENST00000488171 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
CD55-209ENST00000488171 MRPL35Q9NZE8 188 aaKnown RBP11.94□□□□□ -0.5
CD55-209ENST00000488171 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
CD55-209ENST00000488171 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
CD55-209ENST00000488171 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
CD55-209ENST00000488171 IGLV4-3A0A075B6K6 122 aa11.92□□□□□ -0.5
CD55-209ENST00000488171 F8WDY8 70 aa11.92□□□□□ -0.5
CD55-209ENST00000488171 C10orf25Q5T742 122 aa11.92□□□□□ -0.5
CD55-209ENST00000488171 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
CD55-209ENST00000488171 ANAPC16Q96DE5 110 aa11.92□□□□□ -0.5
CD55-209ENST00000488171 LAMTOR2Q9Y2Q5 125 aa11.92□□□□□ -0.5
CD55-209ENST00000488171 NDUFA1O15239 70 aa11.91□□□□□ -0.5
CD55-209ENST00000488171 ODF1Q14990 250 aa11.91□□□□□ -0.5
CD55-209ENST00000488171 LINC00242Q5T6M2 205 aa11.91□□□□□ -0.5
CD55-209ENST00000488171 REG3GQ6UW15 175 aa11.91□□□□□ -0.5
CD55-209ENST00000488171 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
CD55-209ENST00000488171 A0A087WZ39 114 aa11.9□□□□□ -0.5
CD55-209ENST00000488171 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
CD55-209ENST00000488171 MT-ND4LP03901 98 aa11.9□□□□□ -0.5
CD55-209ENST00000488171 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.5
CD55-209ENST00000488171 UNQ6190/PRO20217Q6UXQ8 127 aa11.9□□□□□ -0.5
CD55-209ENST00000488171 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
CD55-209ENST00000488171 PSORS1C2Q9UIG4 136 aa11.9□□□□□ -0.5
CD55-209ENST00000488171 KRTAP10-8P60410 259 aa11.89□□□□□ -0.51
CD55-209ENST00000488171 KIAA0087Q14695 138 aa11.89□□□□□ -0.51
CD55-209ENST00000488171 PHF5AQ7RTV0 110 aaKnown RBP11.89□□□□□ -0.51
CD55-209ENST00000488171 IMMP2LQ96T52 175 aa11.89□□□□□ -0.51
CD55-209ENST00000488171 C6orf48Q9UBA6 75 aa11.89□□□□□ -0.51
CD55-209ENST00000488171 TLX1NBP0CAT3 122 aa11.88□□□□□ -0.51
CD55-209ENST00000488171 RAB14P61106 215 aa11.88□□□□□ -0.51
CD55-209ENST00000488171 Q8N8P6 123 aa11.88□□□□□ -0.51
CD55-209ENST00000488171 MT-ND6P03923 174 aa11.86□□□□□ -0.51
CD55-209ENST00000488171 UBE2D1P51668 147 aa11.86□□□□□ -0.51
CD55-209ENST00000488171 C2orf66Q6UXQ4 117 aa11.86□□□□□ -0.51
CD55-209ENST00000488171 TEX43Q6ZNM6 134 aa11.86□□□□□ -0.51
CD55-209ENST00000488171 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
CD55-209ENST00000488171 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
CD55-209ENST00000488171 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
CD55-209ENST00000488171 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
CD55-209ENST00000488171 AMELXQ99217 191 aa11.84□□□□□ -0.51
CD55-209ENST00000488171 C1orf137Q5JT78 98 aa11.83□□□□□ -0.52
CD55-209ENST00000488171 IGIPA6NJ69 53 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 GAGE2EQ4V326 116 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 ORMDL2Q53FV1 153 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 C2orf82Q6UX34 121 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 KRTAP11-1Q8IUC1 163 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 KRTAP7-1Q8IUC3 87 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 LINC01561Q8N1V8 128 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 GAGE2DQ9UEU5 116 aa11.82□□□□□ -0.52
CD55-209ENST00000488171 K7EMI3 77 aa11.81□□□□□ -0.52
CD55-209ENST00000488171 Q6ZN92 141 aa11.81□□□□□ -0.52
CD55-209ENST00000488171 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
CD55-209ENST00000488171 NPSP0C0P6 89 aa11.8□□□□□ -0.52
CD55-209ENST00000488171 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
CD55-209ENST00000488171 CTDSP1Q9GZU7 261 aa11.8□□□□□ -0.52
CD55-209ENST00000488171 VCX2Q9H322 139 aa11.8□□□□□ -0.52
CD55-209ENST00000488171 ADCYAP1P18509 176 aa11.79□□□□□ -0.52
CD55-209ENST00000488171 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
CD55-209ENST00000488171 NXT2Q9NPJ8 142 aaKnown RBP11.79□□□□□ -0.52
CD55-209ENST00000488171 NDUFC2-KCTD14E9PQ53 114 aa11.78□□□□□ -0.52
CD55-209ENST00000488171 IGLV7-43P04211 117 aa11.78□□□□□ -0.52
CD55-209ENST00000488171 LRP2P98164 4655 aa11.77□□□□□ -0.53
CD55-209ENST00000488171 KIAA1644Q3SXP7 199 aa11.77□□□□□ -0.53
CD55-209ENST00000488171 C9orf129Q5T035 196 aaKnown RBP11.77□□□□□ -0.53
CD55-209ENST00000488171 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.53
CD55-209ENST00000488171 M0QXV9 152 aa11.75□□□□□ -0.53
CD55-209ENST00000488171 TOMM6Q96B49 74 aa11.75□□□□□ -0.53
CD55-209ENST00000488171 TMEM218A2RU14 115 aa11.74□□□□□ -0.53
CD55-209ENST00000488171 UQCC3Q6UW78 93 aa11.74□□□□□ -0.53
CD55-209ENST00000488171 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
CD55-209ENST00000488171 TOMM7Q9P0U1 55 aa11.74□□□□□ -0.53
CD55-209ENST00000488171 TRAV9-1A0A075B6T8 112 aa11.73□□□□□ -0.53
CD55-209ENST00000488171 PRSS2P07478 247 aa11.73□□□□□ -0.53
CD55-209ENST00000488171 IFITM2Q01629 132 aa11.73□□□□□ -0.53
CD55-209ENST00000488171 Q8IZM0 81 aa11.73□□□□□ -0.53
CD55-209ENST00000488171 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms