RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 UBE2D4Q9Y2X8 147 aa13.59□□□□□ -0.23
TRIM8-204ENST00000487927 TRBV25-1A0A075B6N4 114 aa13.58□□□□□ -0.24
TRIM8-204ENST00000487927 AMELXQ99217 191 aa13.58□□□□□ -0.24
TRIM8-204ENST00000487927 VCX2Q9H322 139 aa13.58□□□□□ -0.24
TRIM8-204ENST00000487927 FAT1Q14517 4588 aa13.57□□□□□ -0.24
TRIM8-204ENST00000487927 LINC00587B1AMM8 73 aa13.57□□□□□ -0.24
TRIM8-204ENST00000487927 SLC25A34Q6PIV7 304 aa13.57□□□□□ -0.24
TRIM8-204ENST00000487927 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
TRIM8-204ENST00000487927 DLEU1O43261 78 aa13.56□□□□□ -0.24
TRIM8-204ENST00000487927 COX8AP10176 69 aa13.56□□□□□ -0.24
TRIM8-204ENST00000487927 ZNF25P17030 456 aaPredicted RBP13.56□□□□□ -0.24
TRIM8-204ENST00000487927 C2orf88Q9BSF0 95 aa13.56□□□□□ -0.24
TRIM8-204ENST00000487927 TRAV8-6A0A0B4J262 113 aa13.55□□□□□ -0.24
TRIM8-204ENST00000487927 LRCOL1A6NCL2 159 aa13.55□□□□□ -0.24
TRIM8-204ENST00000487927 IBA57-AS1B1ANH7 110 aa13.55□□□□□ -0.24
TRIM8-204ENST00000487927 LELP1Q5T871 98 aa13.55□□□□□ -0.24
TRIM8-204ENST00000487927 ZC2HC1BQ5TFG8 222 aa13.55□□□□□ -0.24
TRIM8-204ENST00000487927 DGAT2L7PQ6IED9 249 aa13.55□□□□□ -0.24
TRIM8-204ENST00000487927 UBE2L6O14933 153 aa13.54□□□□□ -0.24
TRIM8-204ENST00000487927 HERVK_113P61574 105 aa13.54□□□□□ -0.24
TRIM8-204ENST00000487927 ANKRD39Q53RE8 183 aa13.54□□□□□ -0.24
TRIM8-204ENST00000487927 NTM-AS1Q6ZSK4 140 aa13.54□□□□□ -0.24
TRIM8-204ENST00000487927 ATP6V0E2Q8NHE4 81 aa13.54□□□□□ -0.24
TRIM8-204ENST00000487927 DEFB104AQ8WTQ1 72 aa13.54□□□□□ -0.24
TRIM8-204ENST00000487927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
TRIM8-204ENST00000487927 TRBV6-8A0A0A6YYG3 113 aa13.53□□□□□ -0.24
TRIM8-204ENST00000487927 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
TRIM8-204ENST00000487927 IGHV3-30P01768 117 aa13.53□□□□□ -0.24
TRIM8-204ENST00000487927 IGHV3-33P01772 117 aa13.53□□□□□ -0.24
TRIM8-204ENST00000487927 IGHV3-30-3P0DP02 117 aa13.53□□□□□ -0.24
TRIM8-204ENST00000487927 IGHV3-30-5P0DP03 117 aa13.53□□□□□ -0.24
TRIM8-204ENST00000487927 HNRNPA3P51991 378 aaKnown RBP13.53□□□□□ -0.24
TRIM8-204ENST00000487927 IGLV4-69A0A075B6H9 119 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 C11orf86A6NJI1 115 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 EPM2AB3EWF7 344 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 STPG4Q8N801 248 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 C14orf144Q96I85 54 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 TMEM101Q96IK0 257 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 VPS13BQ7Z7G8 4022 aa13.52□□□□□ -0.25
TRIM8-204ENST00000487927 FGF6P10767 208 aa13.51□□□□□ -0.25
TRIM8-204ENST00000487927 GCSHP23434 173 aa13.51□□□□□ -0.25
TRIM8-204ENST00000487927 Q9HAA7 133 aa13.51□□□□□ -0.25
TRIM8-204ENST00000487927 PSCAO43653 123 aa13.5□□□□□ -0.25
TRIM8-204ENST00000487927 SEC11AP67812 179 aa13.5□□□□□ -0.25
TRIM8-204ENST00000487927 AMMECR1LQ6DCA0 310 aa13.5□□□□□ -0.25
TRIM8-204ENST00000487927 BOD1L2Q8IYS8 172 aa13.5□□□□□ -0.25
TRIM8-204ENST00000487927 Q8N3U1 123 aa13.5□□□□□ -0.25
TRIM8-204ENST00000487927 DNAH8Q96JB1 4490 aa13.49□□□□□ -0.25
TRIM8-204ENST00000487927 E9PLD3 99 aa13.49□□□□□ -0.25
TRIM8-204ENST00000487927 LBHQ53QV2 105 aaPredicted RBP13.49□□□□□ -0.25
TRIM8-204ENST00000487927 OR5A1Q8NGJ0 315 aa13.49□□□□□ -0.25
TRIM8-204ENST00000487927 CHAC1Q9BUX1 264 aa13.49□□□□□ -0.25
TRIM8-204ENST00000487927 TINCRA0A1B0GVN0 87 aa13.48□□□□□ -0.25
TRIM8-204ENST00000487927 Q6ZUT4 128 aa13.48□□□□□ -0.25
TRIM8-204ENST00000487927 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
TRIM8-204ENST00000487927 NMUP48645 174 aa13.47□□□□□ -0.25
TRIM8-204ENST00000487927 Q8N814 137 aa13.47□□□□□ -0.25
TRIM8-204ENST00000487927 FAM104AQ969W3 186 aa13.47□□□□□ -0.25
TRIM8-204ENST00000487927 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
TRIM8-204ENST00000487927 IGLV5-52A0A0A0MRZ9 124 aa13.46□□□□□ -0.25
TRIM8-204ENST00000487927 Q5VSD8 79 aa13.46□□□□□ -0.25
TRIM8-204ENST00000487927 NTN5Q8WTR8 489 aaPredicted RBP13.46□□□□□ -0.25
TRIM8-204ENST00000487927 M0R143 59 aa13.45□□□□□ -0.26
TRIM8-204ENST00000487927 CDC42SE2Q9NRR3 84 aa13.45□□□□□ -0.26
TRIM8-204ENST00000487927 UBE2D1P51668 147 aa13.44□□□□□ -0.26
TRIM8-204ENST00000487927 HAMPP81172 84 aa13.44□□□□□ -0.26
TRIM8-204ENST00000487927 WFDC2Q14508 124 aa13.44□□□□□ -0.26
TRIM8-204ENST00000487927 TMEM170BQ5T4T1 132 aa13.44□□□□□ -0.26
TRIM8-204ENST00000487927 CHCHD5Q9BSY4 110 aa13.44□□□□□ -0.26
TRIM8-204ENST00000487927 A0A1B0GUV1 79 aa13.43□□□□□ -0.26
TRIM8-204ENST00000487927 SMR3BP02814 79 aaPredicted RBP13.43□□□□□ -0.26
TRIM8-204ENST00000487927 HIGD1BQ9P298 99 aa13.43□□□□□ -0.26
TRIM8-204ENST00000487927 HERC1Q15751 4861 aa13.42□□□□□ -0.26
TRIM8-204ENST00000487927 A0A0J9YXV3 536 aa13.42□□□□□ -0.26
TRIM8-204ENST00000487927 INAFM2P0DMQ5 153 aa13.42□□□□□ -0.26
TRIM8-204ENST00000487927 ZNF22P17026 224 aaPredicted RBP13.42□□□□□ -0.26
TRIM8-204ENST00000487927 HERVK_113P63121 156 aa13.42□□□□□ -0.26
TRIM8-204ENST00000487927 CTAG1AP78358 180 aa13.42□□□□□ -0.26
TRIM8-204ENST00000487927 IGKV2D-26A0A0A0MRZ7 120 aa13.41□□□□□ -0.26
TRIM8-204ENST00000487927 TMEM223A0PJW6 202 aa13.41□□□□□ -0.26
TRIM8-204ENST00000487927 H3BRM9 83 aa13.41□□□□□ -0.26
TRIM8-204ENST00000487927 GEMIN7Q9H840 131 aaKnown RBP13.41□□□□□ -0.26
TRIM8-204ENST00000487927 SRRM2Q9UQ35 2752 aaKnown RBP13.41□□□□□ -0.26
TRIM8-204ENST00000487927 DMBT1Q9UGM3 2413 aaPredicted RBP13.4□□□□□ -0.26
TRIM8-204ENST00000487927 IGLV5-45A0A087WSX0 123 aa13.4□□□□□ -0.26
TRIM8-204ENST00000487927 GAGE6Q13070 117 aa13.4□□□□□ -0.26
TRIM8-204ENST00000487927 PLEKHB2Q96CS7 222 aa13.4□□□□□ -0.26
TRIM8-204ENST00000487927 TM2D2Q9BX73 214 aa13.4□□□□□ -0.26
TRIM8-204ENST00000487927 FLG2Q5D862 2391 aaPredicted RBP13.39□□□□□ -0.27
TRIM8-204ENST00000487927 LEPROTO15243 131 aa13.39□□□□□ -0.27
TRIM8-204ENST00000487927 CCL25O15444 150 aa13.39□□□□□ -0.27
TRIM8-204ENST00000487927 PCP2Q8IVA1 136 aa13.39□□□□□ -0.27
TRIM8-204ENST00000487927 FAM30AQ9NZY2 134 aa13.39□□□□□ -0.27
TRIM8-204ENST00000487927 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
TRIM8-204ENST00000487927 C2orf91Q6ZV80 131 aa13.38□□□□□ -0.27
TRIM8-204ENST00000487927 MYMXA0A1B0GTQ4 84 aa13.37□□□□□ -0.27
TRIM8-204ENST00000487927 RNASE13Q5GAN3 156 aaKnown RBP13.37□□□□□ -0.27
TRIM8-204ENST00000487927 MYCBP2O75592 4640 aa13.37□□□□□ -0.27
TRIM8-204ENST00000487927 SNHG12Q9BXW3 62 aa13.36□□□□□ -0.27
TRIM8-204ENST00000487927 LECT2O14960 151 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms