RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 CEP170BQ9Y4F5 1589 aaPredicted RBP0.66□□□□□ -2.3
USP9X-208ENST00000487625 SETBP1Q9Y6X0 1596 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 CLIP1P30622 1438 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 CHD3Q12873 2000 aaKnown RBP0.66□□□□□ -2.3
USP9X-208ENST00000487625 MAGI3Q5TCQ9 1506 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 K7EIL1 84 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 UQCR11O14957 56 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 PRB1P04280 392 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 ACYP1P07311 99 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 FAUP35544 74 aaKnown RBP0.66□□□□□ -2.3
USP9X-208ENST00000487625 SPAG11BQ08648 103 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 PMCHL1Q16048 86 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 ETDBQ3ZM63 59 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 SPAG11AQ6PDA7 123 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 BAGE3Q86Y29 109 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 FAM223AQ8IWN6 122 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 LINC00472Q9H8W2 130 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 SPCS1Q9Y6A9 102 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 CRYBG1Q9Y4K1 1723 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 CD163L1Q9NR16 1453 aa0.66□□□□□ -2.3
USP9X-208ENST00000487625 THOC2Q8NI27 1593 aaKnown RBP0.66□□□□□ -2.3
USP9X-208ENST00000487625 INO80Q9ULG1 1556 aaPredicted RBP0.66□□□□□ -2.3
USP9X-208ENST00000487625 ESPL1Q14674 2120 aa0.65□□□□□ -2.3
USP9X-208ENST00000487625 SCN11AQ9UI33 1791 aa0.65□□□□□ -2.3
USP9X-208ENST00000487625 PDCD11Q14690 1871 aaKnown RBP0.65□□□□□ -2.3
USP9X-208ENST00000487625 UGGT2Q9NYU1 1516 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 RGPD1P0DJD0 1748 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 MYO5CQ9NQX4 1742 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 TRBV30A0A0K0K1B3 111 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 FAM223BA6NKX1 122 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 F8VRH5 84 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 M0R135 149 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 HMGN2P05204 90 aaKnown RBP0.65□□□□□ -2.31
USP9X-208ENST00000487625 IGLC2P0DOY2 106 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 IGLC3P0DOY3 106 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 RPL37P61927 97 aaKnown RBP0.65□□□□□ -2.31
USP9X-208ENST00000487625 COX17Q14061 63 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 SPINK13Q1W4C9 94 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 BVES-AS1Q5T3Y7 98 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 CFAP126Q5VTH2 177 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 LINC00643Q86TS7 51 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 ATP7BP35670 1465 aa0.65□□□□□ -2.31
USP9X-208ENST00000487625 CICQ96RK0 1608 aaPredicted RBP0.64□□□□□ -2.31
USP9X-208ENST00000487625 KNDC1Q76NI1 1749 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 XRN1Q8IZH2 1706 aaKnown RBP0.64□□□□□ -2.31
USP9X-208ENST00000487625 LAMA4Q16363 1823 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 MYH4Q9Y623 1939 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 GVQW2A0A096LPI5 108 aaPredicted RBP0.64□□□□□ -2.31
USP9X-208ENST00000487625 TRAV1-2A0A0B4J238 106 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 SMIM31A0A1B0GVY4 71 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 J3QKU1 62 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 FXYD1O00168 92 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 MGPP08493 103 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 SMIM11AP58511 58 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 WFDC2Q14508 124 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 ADIRFQ15847 76 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 NMSQ5H8A3 153 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 DEFB121Q5J5C9 76 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 PSMG4Q5JS54 123 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 TMEM170BQ5T4T1 132 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 ALKAL2Q6UX46 152 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 BAGE2Q86Y30 109 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 SMIM11BQ8TCY0 68 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 NKTRP30414 1462 aaKnown RBP0.64□□□□□ -2.31
USP9X-208ENST00000487625 C5P01031 1676 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 INTS1Q8N201 2190 aaKnown RBP0.64□□□□□ -2.31
USP9X-208ENST00000487625 PI4KAP42356 2102 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 ZNF236Q9UL36 1845 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 MROH1Q8NDA8 1641 aa0.64□□□□□ -2.31
USP9X-208ENST00000487625 EIF2AK4Q9P2K8 1649 aaKnown RBP0.64□□□□□ -2.31
USP9X-208ENST00000487625 PAPPA2Q9BXP8 1791 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 ARFGEF2Q9Y6D5 1785 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 SAMD9Q5K651 1589 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 C1orf167Q5SNV9 1468 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 TRGV1A0A0A0MS02 117 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 KANTRA0A1W2PQU2 76 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 F8WEM9 126 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 G3V318 75 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 NCR3O14931 201 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 ZNF720Q7Z2F6 126 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 SMIM4Q8WVI0 70 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 PLAC4Q8WY50 150 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 UBE2D4Q9Y2X8 147 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 ARL2-SNX15V9GYD0 113 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 A0A0G2JMZ2 1700 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 ITSN1Q15811 1721 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 LAMC1P11047 1609 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 TULP4Q9NRJ4 1543 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 NCOA6Q14686 2063 aaPredicted RBP0.63□□□□□ -2.31
USP9X-208ENST00000487625 DOCK11Q5JSL3 2073 aa0.63□□□□□ -2.31
USP9X-208ENST00000487625 SPTBP11277 2137 aa0.62□□□□□ -2.31
USP9X-208ENST00000487625 FLG2Q5D862 2391 aaPredicted RBP0.62□□□□□ -2.31
USP9X-208ENST00000487625 PARP4Q9UKK3 1724 aaKnown RBP0.62□□□□□ -2.31
USP9X-208ENST00000487625 ZNF815PA8K554 130 aa0.62□□□□□ -2.31
USP9X-208ENST00000487625 PIN1P1O15428 100 aa0.62□□□□□ -2.31
USP9X-208ENST00000487625 ARMS2P0C7Q2 107 aa0.62□□□□□ -2.31
USP9X-208ENST00000487625 SPATA8Q6RVD6 105 aa0.62□□□□□ -2.31
USP9X-208ENST00000487625 C18orf32Q8TCD1 76 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms