RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 NFE4Q86UQ8 179 aa6.37□□□□□ -1.39
MCF2L-227ENST00000486806 RMI2Q96E14 147 aa6.37□□□□□ -1.39
MCF2L-227ENST00000486806 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 A0A0J9YXV3 536 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 GAGE12HA6NDE8 117 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 F8VRH5 84 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 H0Y8G0 127 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 KRTDAPP60985 99 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 HERVK_113P63121 156 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 COX6A2Q02221 97 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 C1orf134Q5TEV5 83 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 LINC01545Q5VT33 79 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 PET117Q6UWS5 81 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 MAPKAPK5-AS1Q8N8E1 139 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 MRPL35Q9NZE8 188 aaKnown RBP6.36□□□□□ -1.39
MCF2L-227ENST00000486806 CHTOPQ9Y3Y2 248 aaKnown RBP6.36□□□□□ -1.39
MCF2L-227ENST00000486806 COX11Q9Y6N1 276 aa6.36□□□□□ -1.39
MCF2L-227ENST00000486806 DNAH11Q96DT5 4516 aa6.35□□□□□ -1.39
MCF2L-227ENST00000486806 SEC11AP67812 179 aa6.35□□□□□ -1.39
MCF2L-227ENST00000486806 CHAC1Q9BUX1 264 aa6.35□□□□□ -1.39
MCF2L-227ENST00000486806 TM2D2Q9BX73 214 aa6.35□□□□□ -1.39
MCF2L-227ENST00000486806 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
MCF2L-227ENST00000486806 RTL8CO15255 209 aa6.34□□□□□ -1.39
MCF2L-227ENST00000486806 ZNF22P17026 224 aaPredicted RBP6.34□□□□□ -1.39
MCF2L-227ENST00000486806 PMCHL2Q9BQD1 86 aa6.34□□□□□ -1.39
MCF2L-227ENST00000486806 CDKN2A-AS1Q9UH64 79 aa6.34□□□□□ -1.39
MCF2L-227ENST00000486806 A0A087WZ39 114 aa6.33□□□□□ -1.4
MCF2L-227ENST00000486806 COX7A2LO14548 114 aa6.33□□□□□ -1.4
MCF2L-227ENST00000486806 PLNP26678 52 aa6.33□□□□□ -1.4
MCF2L-227ENST00000486806 LINC01561Q8N1V8 128 aa6.33□□□□□ -1.4
MCF2L-227ENST00000486806 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
MCF2L-227ENST00000486806 OR10D4PQ8NGN7 298 aa6.33□□□□□ -1.4
MCF2L-227ENST00000486806 GEMIN7Q9H840 131 aaKnown RBP6.33□□□□□ -1.4
MCF2L-227ENST00000486806 C20orf202A1L168 122 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 LRCOL1A6NCL2 159 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 DPM2O94777 84 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 IGKCP01834 107 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 WFDC2Q14508 124 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 C5orf38Q86SI9 138 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 C15orf56Q8N910 161 aa6.32□□□□□ -1.4
MCF2L-227ENST00000486806 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
MCF2L-227ENST00000486806 PSCAO43653 123 aa6.31□□□□□ -1.4
MCF2L-227ENST00000486806 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
MCF2L-227ENST00000486806 IGHV3-64A0A075B6Q5 118 aa6.3□□□□□ -1.4
MCF2L-227ENST00000486806 GVQW2A0A096LPI5 108 aaPredicted RBP6.3□□□□□ -1.4
MCF2L-227ENST00000486806 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
MCF2L-227ENST00000486806 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
MCF2L-227ENST00000486806 H3BRM9 83 aa6.3□□□□□ -1.4
MCF2L-227ENST00000486806 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
MCF2L-227ENST00000486806 A0A087WTM6 91 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 TMEM223A0PJW6 202 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 LECT2O14960 151 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 SPINK8P0C7L1 97 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 MALP21145 153 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 AKR1D1P51857 326 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 TNP2Q05952 138 aa6.29□□□□□ -1.4
MCF2L-227ENST00000486806 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
MCF2L-227ENST00000486806 PKD1P98161 4303 aa6.28□□□□□ -1.4
MCF2L-227ENST00000486806 APOMO95445 188 aa6.28□□□□□ -1.4
MCF2L-227ENST00000486806 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
MCF2L-227ENST00000486806 Q8N814 137 aa6.28□□□□□ -1.4
MCF2L-227ENST00000486806 LOC105371267A0A1B0GV96 52 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 KIAA0087Q14695 138 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 HIGD2BQ4VC39 106 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 PYY3Q5JQD4 70 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 CFAP161Q6P656 301 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 LINC00336Q6ZUF6 198 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 Q8IZM0 81 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 ATOH7Q8N100 152 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 ORAOV1Q8WV07 137 aa6.27□□□□□ -1.41
MCF2L-227ENST00000486806 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
MCF2L-227ENST00000486806 C14orf177Q52M58 125 aa6.26□□□□□ -1.41
MCF2L-227ENST00000486806 hDV102S1A0JD36 115 aa6.25□□□□□ -1.41
MCF2L-227ENST00000486806 E9PLD3 99 aa6.25□□□□□ -1.41
MCF2L-227ENST00000486806 TSPEAR-AS2P59090 65 aa6.25□□□□□ -1.41
MCF2L-227ENST00000486806 HERVK_113P61574 105 aa6.25□□□□□ -1.41
MCF2L-227ENST00000486806 STPG4Q8N801 248 aa6.25□□□□□ -1.41
MCF2L-227ENST00000486806 NTN5Q8WTR8 489 aaPredicted RBP6.25□□□□□ -1.41
MCF2L-227ENST00000486806 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 SLPIP03973 132 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
MCF2L-227ENST00000486806 MAJINQ3KP22 176 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 COX7B2Q8TF08 81 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 LINC00526Q96FQ7 95 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 C2orf48Q96LS8 159 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 TOMM7Q9P0U1 55 aa6.24□□□□□ -1.41
MCF2L-227ENST00000486806 DYNC1H1Q14204 4646 aaKnown RBP6.23□□□□□ -1.41
MCF2L-227ENST00000486806 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 F8WDY8 70 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 LEPROTO15243 131 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 PRSS2P07478 247 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 CXCL5P42830 114 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
MCF2L-227ENST00000486806 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
MCF2L-227ENST00000486806 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms