RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 DEFB125Q8N687 156 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 KCNS1Q96KK3 526 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 LINC00052Q96N35 136 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 IMMP2LQ96T52 175 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 B9D2Q9BPU9 175 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 SMIM7Q9BQ49 75 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 DERL1Q9BUN8 251 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 CNFNQ9BYD5 112 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 C11orf68Q9H3H3 251 aaKnown RBP3.29□□□□□ -1.88
RTN4-214ENST00000486085 DYNC2H1Q8NCM8 4307 aaKnown RBP3.28□□□□□ -1.88
RTN4-214ENST00000486085 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 TRAV9-1A0A075B6T8 112 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 KNCNA6PVL3 124 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 ZNF727A8MUV8 499 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 NDUFC2O95298 119 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 MIFP14174 115 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 CRIP1P50238 77 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
RTN4-214ENST00000486085 BATFQ16520 125 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 ZC2HC1AQ96GY0 325 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 SAMD10Q9BYL1 202 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
RTN4-214ENST00000486085 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 F2Z2F3 143 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 GPX1P07203 203 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 IGLC6P0CF74 106 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 PFN2P35080 140 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 CACNG7P62955 275 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 RBMY1FQ15415 496 aaKnown RBP3.27□□□□□ -1.89
RTN4-214ENST00000486085 LGALS9BQ3B8N2 356 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 PRR9Q5T870 116 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 SVBPQ8N300 66 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 TMEM263Q8WUH6 116 aaKnown RBP3.27□□□□□ -1.89
RTN4-214ENST00000486085 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 TUBA4BQ9H853 241 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 IL36BQ9NZH7 164 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 COL7A1Q02388 2944 aa3.27□□□□□ -1.89
RTN4-214ENST00000486085 TRAV8-4A0A0B4J246 113 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 TRAV26-2A0A0B4J265 109 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 SMIM27A0A1W2PRY6 76 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 A8MWL6 223 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 NDUFC2-KCTD14E9PQ53 114 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 SH2D1AO60880 128 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 P01737 135 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 ZNF80P51504 273 aaPredicted RBP3.26□□□□□ -1.89
RTN4-214ENST00000486085 KRTAP10-10P60014 251 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 DEFB1P60022 68 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 HSD52Q0P140 79 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 RASL11AQ6T310 242 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 ATP5L2Q7Z4Y8 100 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 PRNTQ86SH4 94 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 Q8NAQ8 132 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 Q8TAT8 98 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 TSKUQ8WUA8 353 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 PRADC1Q9BSG0 188 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 GTSF1LQ9H1H1 148 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 PRO1933Q9H354 126 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 V9GYV3 84 aa3.26□□□□□ -1.89
RTN4-214ENST00000486085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.25□□□□□ -1.89
RTN4-214ENST00000486085 J3QR89 54 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 MT-ND4LP03901 98 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 ATP5G1P05496 136 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 FGF6P10767 208 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
RTN4-214ENST00000486085 NDUFA6P56556 154 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 JOSD1Q15040 202 aaPredicted RBP3.25□□□□□ -1.89
RTN4-214ENST00000486085 GTF2H5Q6ZYL4 71 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 ZNF664Q8N3J9 261 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 FER1L6-AS1Q8NA97 138 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 NUP35Q8NFH5 326 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 GNB1LQ9BYB4 327 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 C8orf17Q9NRJ1 99 aa3.25□□□□□ -1.89
RTN4-214ENST00000486085 MUC4Q99102 2169 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 TRBV24-1A0A075B6N3 115 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 TRAV12-3A0A0B4J271 114 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 SPINK4O60575 86 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 RNASE4P34096 147 aaKnown RBP3.24□□□□□ -1.89
RTN4-214ENST00000486085 ASIPP42127 132 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 RRN3P1Q2M238 152 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 C12orf74Q32Q52 190 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 RNASE13Q5GAN3 156 aaKnown RBP3.24□□□□□ -1.89
RTN4-214ENST00000486085 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
RTN4-214ENST00000486085 SBSPONQ8IVN8 264 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 LAMTOR3Q9UHA4 124 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 TIMM8BQ9Y5J9 83 aaPredicted RBP3.24□□□□□ -1.89
RTN4-214ENST00000486085 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
RTN4-214ENST00000486085 PLECQ15149 4684 aaKnown RBP3.23□□□□□ -1.89
RTN4-214ENST00000486085 TRAV12-2A0A075B6T6 113 aa3.23□□□□□ -1.89
RTN4-214ENST00000486085 A0A1B0GXF2 115 aa3.23□□□□□ -1.89
RTN4-214ENST00000486085 C7orf77A4D0Y5 90 aa3.23□□□□□ -1.89
RTN4-214ENST00000486085 A8MWV9 139 aa3.23□□□□□ -1.89
RTN4-214ENST00000486085 H3BNG1 76 aa3.23□□□□□ -1.89
RTN4-214ENST00000486085 M0R2P5 195 aa3.23□□□□□ -1.89
RTN4-214ENST00000486085 NTF3P20783 257 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms