RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 RMI2Q96E14 147 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 TM2D2Q9BX73 214 aa10.49□□□□□ -0.73
APOE-205ENST00000485628 RYR3Q15413 4870 aa10.48□□□□□ -0.73
APOE-205ENST00000485628 IGKV2D-24A0A075B6R9 120 aa10.48□□□□□ -0.73
APOE-205ENST00000485628 A0A0J9YXV3 536 aa10.48□□□□□ -0.73
APOE-205ENST00000485628 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
APOE-205ENST00000485628 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
APOE-205ENST00000485628 TMA7Q9Y2S6 64 aaKnown RBP10.48□□□□□ -0.73
APOE-205ENST00000485628 SEC11AP67812 179 aa10.47□□□□□ -0.73
APOE-205ENST00000485628 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
APOE-205ENST00000485628 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.73
APOE-205ENST00000485628 F8VRH5 84 aa10.46□□□□□ -0.73
APOE-205ENST00000485628 S100A2P29034 98 aa10.46□□□□□ -0.73
APOE-205ENST00000485628 XCL1P47992 114 aa10.46□□□□□ -0.73
APOE-205ENST00000485628 PET117Q6UWS5 81 aa10.46□□□□□ -0.73
APOE-205ENST00000485628 MRPL35Q9NZE8 188 aaKnown RBP10.46□□□□□ -0.73
APOE-205ENST00000485628 FAT2Q9NYQ8 4349 aa10.46□□□□□ -0.74
APOE-205ENST00000485628 A0A087WZ39 114 aa10.45□□□□□ -0.74
APOE-205ENST00000485628 HERVK_113P63121 156 aa10.45□□□□□ -0.74
APOE-205ENST00000485628 LINC01561Q8N1V8 128 aa10.45□□□□□ -0.74
APOE-205ENST00000485628 CHTOPQ9Y3Y2 248 aaKnown RBP10.45□□□□□ -0.74
APOE-205ENST00000485628 C11orf86A6NJI1 115 aa10.44□□□□□ -0.74
APOE-205ENST00000485628 CDKN2A-AS1Q9UH64 79 aa10.44□□□□□ -0.74
APOE-205ENST00000485628 WFDC2Q14508 124 aa10.43□□□□□ -0.74
APOE-205ENST00000485628 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
APOE-205ENST00000485628 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
APOE-205ENST00000485628 COX7A2LO14548 114 aa10.41□□□□□ -0.74
APOE-205ENST00000485628 KRTDAPP60985 99 aa10.41□□□□□ -0.74
APOE-205ENST00000485628 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
APOE-205ENST00000485628 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
APOE-205ENST00000485628 GEMIN7Q9H840 131 aaKnown RBP10.41□□□□□ -0.74
APOE-205ENST00000485628 TNP2Q05952 138 aa10.4□□□□□ -0.74
APOE-205ENST00000485628 A0A087WTM6 91 aa10.39□□□□□ -0.75
APOE-205ENST00000485628 H0Y8G0 127 aa10.39□□□□□ -0.75
APOE-205ENST00000485628 PLNP26678 52 aa10.39□□□□□ -0.75
APOE-205ENST00000485628 OR10D4PQ8NGN7 298 aa10.39□□□□□ -0.75
APOE-205ENST00000485628 PMCHL2Q9BQD1 86 aa10.39□□□□□ -0.75
APOE-205ENST00000485628 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 USP17L23D6RBM5 183 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 PSCAO43653 123 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 DPM2O94777 84 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 KIAA0087Q14695 138 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 LINC00336Q6ZUF6 198 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
APOE-205ENST00000485628 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
APOE-205ENST00000485628 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
APOE-205ENST00000485628 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
APOE-205ENST00000485628 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
APOE-205ENST00000485628 IGKCP01834 107 aa10.37□□□□□ -0.75
APOE-205ENST00000485628 CFAP161Q6P656 301 aa10.36□□□□□ -0.75
APOE-205ENST00000485628 SLPIP03973 132 aa10.35□□□□□ -0.75
APOE-205ENST00000485628 PKD1P98161 4303 aa10.35□□□□□ -0.75
APOE-205ENST00000485628 A0A1B0GVY2 172 aa10.34□□□□□ -0.75
APOE-205ENST00000485628 H3BRM9 83 aa10.34□□□□□ -0.75
APOE-205ENST00000485628 LECT2O14960 151 aa10.34□□□□□ -0.75
APOE-205ENST00000485628 APOMO95445 188 aa10.34□□□□□ -0.75
APOE-205ENST00000485628 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
APOE-205ENST00000485628 Q8N814 137 aa10.34□□□□□ -0.75
APOE-205ENST00000485628 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
APOE-205ENST00000485628 MALP21145 153 aa10.33□□□□□ -0.76
APOE-205ENST00000485628 AKR1D1P51857 326 aa10.33□□□□□ -0.76
APOE-205ENST00000485628 JOSD1Q15040 202 aaPredicted RBP10.33□□□□□ -0.76
APOE-205ENST00000485628 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.76
APOE-205ENST00000485628 C20orf202A1L168 122 aa10.32□□□□□ -0.76
APOE-205ENST00000485628 C14orf177Q52M58 125 aa10.32□□□□□ -0.76
APOE-205ENST00000485628 Q8IZM0 81 aa10.32□□□□□ -0.76
APOE-205ENST00000485628 LOC105371267A0A1B0GV96 52 aa10.31□□□□□ -0.76
APOE-205ENST00000485628 F8WDY8 70 aa10.31□□□□□ -0.76
APOE-205ENST00000485628 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
APOE-205ENST00000485628 ORAOV1Q8WV07 137 aa10.31□□□□□ -0.76
APOE-205ENST00000485628 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
APOE-205ENST00000485628 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
APOE-205ENST00000485628 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
APOE-205ENST00000485628 E9PLD3 99 aa10.29□□□□□ -0.76
APOE-205ENST00000485628 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
APOE-205ENST00000485628 STPG4Q8N801 248 aa10.29□□□□□ -0.76
APOE-205ENST00000485628 HECTD4Q9Y4D8 3996 aa10.29□□□□□ -0.76
APOE-205ENST00000485628 hDV102S1A0JD36 115 aa10.28□□□□□ -0.76
APOE-205ENST00000485628 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
APOE-205ENST00000485628 COX7B2Q8TF08 81 aa10.28□□□□□ -0.76
APOE-205ENST00000485628 LINC00526Q96FQ7 95 aa10.28□□□□□ -0.76
APOE-205ENST00000485628 LEPROTO15243 131 aa10.27□□□□□ -0.77
APOE-205ENST00000485628 SCGB1D1O95968 90 aa10.27□□□□□ -0.77
APOE-205ENST00000485628 ATOH7Q8N100 152 aa10.27□□□□□ -0.77
APOE-205ENST00000485628 ZNF625Q96I27 306 aaPredicted RBP10.27□□□□□ -0.77
APOE-205ENST00000485628 ZNF561-AS1K7EIQ3 104 aa10.26□□□□□ -0.77
APOE-205ENST00000485628 TSPEAR-AS2P59090 65 aa10.26□□□□□ -0.77
APOE-205ENST00000485628 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
APOE-205ENST00000485628 DNAH5Q8TE73 4624 aa10.26□□□□□ -0.77
APOE-205ENST00000485628 IGKV2D-26A0A0A0MRZ7 120 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 CXCL5P42830 114 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 MAJINQ3KP22 176 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 C6orf226Q5I0X4 101 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 Q6ZRU5 148 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
APOE-205ENST00000485628 EREGO14944 169 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms