RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
MSH5-216ENST00000484309 MRPS36P82909 103 aaKnown RBP7.78□□□□□ -1.16
MSH5-216ENST00000484309 Q6ZRU5 148 aa7.78□□□□□ -1.16
MSH5-216ENST00000484309 HERC1Q15751 4861 aa7.78□□□□□ -1.16
MSH5-216ENST00000484309 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
MSH5-216ENST00000484309 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
MSH5-216ENST00000484309 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
MSH5-216ENST00000484309 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
MSH5-216ENST00000484309 STPG4Q8N801 248 aa7.77□□□□□ -1.17
MSH5-216ENST00000484309 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
MSH5-216ENST00000484309 J3QL48 77 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 APOMO95445 188 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 S100PP25815 95 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 TMEM141Q96I45 108 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 PLAC8Q9NZF1 115 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 CYSLTR1Q9Y271 337 aa7.76□□□□□ -1.17
MSH5-216ENST00000484309 TRAV9-1A0A075B6T8 112 aa7.75□□□□□ -1.17
MSH5-216ENST00000484309 A0A0J9YXV3 536 aa7.75□□□□□ -1.17
MSH5-216ENST00000484309 ORMDL2Q53FV1 153 aa7.75□□□□□ -1.17
MSH5-216ENST00000484309 RPS10P5Q9NQ39 176 aa7.75□□□□□ -1.17
MSH5-216ENST00000484309 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
MSH5-216ENST00000484309 TGIF2-C20orf24A0A0A6YYL0 155 aa7.74□□□□□ -1.17
MSH5-216ENST00000484309 IGHV3OR16-9A0A0B4J2B5 98 aa7.74□□□□□ -1.17
MSH5-216ENST00000484309 GAGE2BQ13066 116 aa7.74□□□□□ -1.17
MSH5-216ENST00000484309 C10orf91Q5T1B1 145 aa7.74□□□□□ -1.17
MSH5-216ENST00000484309 TEX43Q6ZNM6 134 aa7.74□□□□□ -1.17
MSH5-216ENST00000484309 NXT2Q9NPJ8 142 aaKnown RBP7.74□□□□□ -1.17
MSH5-216ENST00000484309 CARHSP1Q9Y2V2 147 aaKnown RBP7.74□□□□□ -1.17
MSH5-216ENST00000484309 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
MSH5-216ENST00000484309 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
MSH5-216ENST00000484309 LINC00242Q5T6M2 205 aa7.73□□□□□ -1.17
MSH5-216ENST00000484309 LINC00173Q6ZV60 143 aa7.73□□□□□ -1.17
MSH5-216ENST00000484309 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
MSH5-216ENST00000484309 C2orf48Q96LS8 159 aa7.73□□□□□ -1.17
MSH5-216ENST00000484309 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
MSH5-216ENST00000484309 PTTG1IPP53801 180 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
MSH5-216ENST00000484309 RHEBQ15382 184 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 Q6ZN92 141 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 C7orf33Q8WU49 177 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 C2orf88Q9BSF0 95 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 PKIGQ9Y2B9 76 aa7.72□□□□□ -1.17
MSH5-216ENST00000484309 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.17
MSH5-216ENST00000484309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
MSH5-216ENST00000484309 UBE2D1P51668 147 aa7.71□□□□□ -1.18
MSH5-216ENST00000484309 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
MSH5-216ENST00000484309 MRPL18Q9H0U6 180 aaKnown RBP7.71□□□□□ -1.18
MSH5-216ENST00000484309 VCX2Q9H322 139 aa7.71□□□□□ -1.18
MSH5-216ENST00000484309 A0A087WZ39 114 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 IGIPA6NJ69 53 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 K7EMI3 77 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 NDUFA1O15239 70 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 APOC3P02656 99 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 FABP9Q0Z7S8 132 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 UNQ6190/PRO20217Q6UXQ8 127 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 AMELXQ99217 191 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 ALKBH7Q9BT30 221 aaPredicted RBP7.7□□□□□ -1.18
MSH5-216ENST00000484309 LINC00474Q9P2X8 69 aa7.7□□□□□ -1.18
MSH5-216ENST00000484309 COX19Q49B96 90 aa7.68□□□□□ -1.18
MSH5-216ENST00000484309 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
MSH5-216ENST00000484309 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
MSH5-216ENST00000484309 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
MSH5-216ENST00000484309 C6orf48Q9UBA6 75 aa7.68□□□□□ -1.18
MSH5-216ENST00000484309 A0A1W2PNN7 141 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 MT-ND6P03923 174 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 PRR3P79522 188 aaKnown RBP7.67□□□□□ -1.18
MSH5-216ENST00000484309 KIAA0087Q14695 138 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 RNF151Q2KHN1 245 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 SCGB3A1Q96QR1 104 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 TIMM17AQ99595 171 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 TOMM7Q9P0U1 55 aa7.67□□□□□ -1.18
MSH5-216ENST00000484309 OXTP01178 125 aa7.66□□□□□ -1.18
MSH5-216ENST00000484309 NPSP0C0P6 89 aa7.66□□□□□ -1.18
MSH5-216ENST00000484309 G0S2P27469 103 aa7.66□□□□□ -1.18
MSH5-216ENST00000484309 C9orf116Q5BN46 136 aaPredicted RBP7.66□□□□□ -1.18
MSH5-216ENST00000484309 FA2HQ7L5A8 372 aa7.66□□□□□ -1.18
MSH5-216ENST00000484309 SMCO4Q9NRQ5 59 aa7.66□□□□□ -1.18
MSH5-216ENST00000484309 F8WDY8 70 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 SNAPINO95295 136 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 NDUFA5Q16718 116 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 GAGE2EQ4V326 116 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 PAPPA-AS1Q5QFB9 102 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 ERASQ7Z444 233 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 GAGE2DQ9UEU5 116 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 TRAPPC1Q9Y5R8 145 aa7.65□□□□□ -1.18
MSH5-216ENST00000484309 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
MSH5-216ENST00000484309 LINC01546A6NGU7 62 aa7.64□□□□□ -1.19
MSH5-216ENST00000484309 HERVK_113P63121 156 aa7.64□□□□□ -1.19
MSH5-216ENST00000484309 Q6ZRP5 223 aa7.64□□□□□ -1.19
MSH5-216ENST00000484309 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
MSH5-216ENST00000484309 FAM19A3Q7Z5A8 133 aa7.64□□□□□ -1.19
MSH5-216ENST00000484309 SVBPQ8N300 66 aa7.64□□□□□ -1.19
MSH5-216ENST00000484309 GEMIN7Q9H840 131 aaKnown RBP7.64□□□□□ -1.19
MSH5-216ENST00000484309 PRSS2P07478 247 aa7.63□□□□□ -1.19
MSH5-216ENST00000484309 LINC01561Q8N1V8 128 aa7.63□□□□□ -1.19
MSH5-216ENST00000484309 C18orf32Q8TCD1 76 aa7.63□□□□□ -1.19
MSH5-216ENST00000484309 PACRGQ96M98 296 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms