RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 Q9H8V8 135 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 POLQO75417 2590 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 H7BZZ5 65 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
SEC61A1-205ENST00000483956 A0A087WYN8 130 aa8.31□□□□□ -1.08
SEC61A1-205ENST00000483956 NCR3O14931 201 aa8.31□□□□□ -1.08
SEC61A1-205ENST00000483956 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
SEC61A1-205ENST00000483956 MSMBP08118 114 aa8.3□□□□□ -1.08
SEC61A1-205ENST00000483956 PIK3CD-AS1Q5SR53 167 aa8.3□□□□□ -1.08
SEC61A1-205ENST00000483956 LYPD5Q6UWN5 251 aa8.3□□□□□ -1.08
SEC61A1-205ENST00000483956 VPS13CQ709C8 3753 aa8.3□□□□□ -1.08
SEC61A1-205ENST00000483956 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
SEC61A1-205ENST00000483956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
SEC61A1-205ENST00000483956 LINC00474Q9P2X8 69 aa8.29□□□□□ -1.08
SEC61A1-205ENST00000483956 CHD6Q8TD26 2715 aa8.29□□□□□ -1.08
SEC61A1-205ENST00000483956 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
SEC61A1-205ENST00000483956 A8MTW9 85 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 HIST2H2BCQ6DN03 193 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 OBSCN-AS1Q96MR7 158 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 CHCHD7Q9BUK0 85 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 USP9XQ93008 2570 aaPredicted RBP8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 KNCNA6PVL3 124 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 CCL19Q99731 98 aa8.28□□□□□ -1.08
SEC61A1-205ENST00000483956 ENHOQ6UWT2 76 aa8.27□□□□□ -1.08
SEC61A1-205ENST00000483956 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
SEC61A1-205ENST00000483956 IGHV4-30-2A0A087WSY4 118 aa8.27□□□□□ -1.09
SEC61A1-205ENST00000483956 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
SEC61A1-205ENST00000483956 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
SEC61A1-205ENST00000483956 C10orf99Q6UWK7 81 aa8.27□□□□□ -1.09
SEC61A1-205ENST00000483956 PTPN13Q12923 2485 aa8.26□□□□□ -1.09
SEC61A1-205ENST00000483956 PROK1P58294 105 aa8.26□□□□□ -1.09
SEC61A1-205ENST00000483956 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
SEC61A1-205ENST00000483956 COX6A2Q02221 97 aa8.26□□□□□ -1.09
SEC61A1-205ENST00000483956 SNURFQ9Y675 71 aa8.25□□□□□ -1.09
SEC61A1-205ENST00000483956 ABCA12Q86UK0 2595 aa8.25□□□□□ -1.09
SEC61A1-205ENST00000483956 B4DSR2 109 aa8.25□□□□□ -1.09
SEC61A1-205ENST00000483956 IGHV4-59P01825 116 aa8.25□□□□□ -1.09
SEC61A1-205ENST00000483956 Q9UF83 564 aa8.25□□□□□ -1.09
SEC61A1-205ENST00000483956 SLPIP03973 132 aa8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 COPS9Q8WXC6 57 aa8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 FASNP49327 2511 aaKnown RBP8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 Q6ZSN1 163 aa8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 LINC00467Q9BRT7 94 aa8.24□□□□□ -1.09
SEC61A1-205ENST00000483956 BAHCC1Q9P281 2608 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 NOTCH2Q04721 2471 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 LECT2O14960 151 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 CRPP02741 224 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 PRB1P04280 392 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 SS18Q15532 418 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 RMI2Q96E14 147 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 MIR7-3HGQ8N6C7 128 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 UBE2E2Q96LR5 201 aa8.23□□□□□ -1.09
SEC61A1-205ENST00000483956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.23□□□□□ -1.092e-8■■■■■ 27.3
SEC61A1-205ENST00000483956 IGLV5-39A0A0G2JS06 123 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 TRBV7-6A0A0J9YX20 115 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 F8WEM9 126 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 CCKP06307 115 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 HTN1P15515 57 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 RBM3P98179 157 aaKnown RBP8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 OVOL2Q9BRP0 275 aa8.22□□□□□ -1.09
SEC61A1-205ENST00000483956 TRAV13-2A0A0B4J235 113 aa8.21□□□□□ -1.09
SEC61A1-205ENST00000483956 GNLYP22749 145 aa8.21□□□□□ -1.09
SEC61A1-205ENST00000483956 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.09
SEC61A1-205ENST00000483956 DEFB131AP59861 70 aa8.21□□□□□ -1.1
SEC61A1-205ENST00000483956 SORL1Q92673 2214 aa8.21□□□□□ -1.1
SEC61A1-205ENST00000483956 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
SEC61A1-205ENST00000483956 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
SEC61A1-205ENST00000483956 C11orf72Q8NBR9 251 aa8.21□□□□□ -1.1
SEC61A1-205ENST00000483956 FAM19A3Q7Z5A8 133 aa8.2□□□□□ -1.1
SEC61A1-205ENST00000483956 IL17DQ8TAD2 202 aa8.2□□□□□ -1.1
SEC61A1-205ENST00000483956 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
SEC61A1-205ENST00000483956 IGHV3-38A0A0C4DH36 116 aa8.2□□□□□ -1.1
SEC61A1-205ENST00000483956 KLKP1Q107X0 134 aa8.2□□□□□ -1.1
SEC61A1-205ENST00000483956 ATP5EP2Q5VTU8 51 aa8.2□□□□□ -1.1
SEC61A1-205ENST00000483956 CCDC168Q8NDH2 2452 aa8.19□□□□□ -1.1
SEC61A1-205ENST00000483956 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
SEC61A1-205ENST00000483956 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
SEC61A1-205ENST00000483956 CSPG4Q6UVK1 2322 aa8.19□□□□□ -1.1
SEC61A1-205ENST00000483956 PF4P02776 101 aa8.19□□□□□ -1.1
SEC61A1-205ENST00000483956 DSCR9P59020 149 aa8.19□□□□□ -1.1
SEC61A1-205ENST00000483956 IGHV3OR16-12A0A075B7B8 117 aa8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 PRM2P04554 102 aa8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 RPL36AP83881 106 aaKnown RBP8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 LINC00242Q5T6M2 205 aa8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 RPL36ALQ969Q0 106 aaKnown RBP8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 ZNF702PQ9H963 129 aa8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 MPLKIPQ8TAP9 179 aa8.18□□□□□ -1.1
SEC61A1-205ENST00000483956 TLN2Q9Y4G6 2542 aa8.17□□□□□ -1.1
SEC61A1-205ENST00000483956 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
SEC61A1-205ENST00000483956 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
SEC61A1-205ENST00000483956 LINC01356Q8N9X3 169 aa8.17□□□□□ -1.1
SEC61A1-205ENST00000483956 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
SEC61A1-205ENST00000483956 H0YGX0 51 aa8.16□□□□□ -1.1
SEC61A1-205ENST00000483956 ORMDL1Q9P0S3 153 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms