RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NBEAL1Q6ZS30 2694 aa18.21■□□□□ 0.5
SHOX2-204ENST00000483851 A0A1B0GUV1 79 aa18.2■□□□□ 0.5
SHOX2-204ENST00000483851 IGLV5-45A0A087WSX0 123 aa18.2■□□□□ 0.5
SHOX2-204ENST00000483851 LGALS3P17931 250 aaKnown RBP18.2■□□□□ 0.5
SHOX2-204ENST00000483851 GEMIN7Q9H840 131 aaKnown RBP18.2■□□□□ 0.5
SHOX2-204ENST00000483851 HERVK_113P63121 156 aa18.19■□□□□ 0.5
SHOX2-204ENST00000483851 C11orf45Q8TAV5 145 aa18.19■□□□□ 0.5
SHOX2-204ENST00000483851 MGAM2Q2M2H8 2515 aa18.18■□□□□ 0.5
SHOX2-204ENST00000483851 SRSF9Q13242 221 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHOX2-204ENST00000483851 Q6ZTC4 211 aa18.17■□□□□ 0.5
SHOX2-204ENST00000483851 A0A096LPF7 62 aa18.16■□□□□ 0.5
SHOX2-204ENST00000483851 IGHV3-30P01768 117 aa18.16■□□□□ 0.5
SHOX2-204ENST00000483851 IGHV3-30-5P0DP03 117 aa18.16■□□□□ 0.5
SHOX2-204ENST00000483851 LINC00242Q5T6M2 205 aa18.16■□□□□ 0.5
SHOX2-204ENST00000483851 TMEM238LA0A1B0GVL6 79 aa18.15■□□□□ 0.5
SHOX2-204ENST00000483851 A6NJY4 79 aa18.15■□□□□ 0.5
SHOX2-204ENST00000483851 LELP1Q5T871 98 aa18.14■□□□□ 0.49
SHOX2-204ENST00000483851 IGLV4-60A0A075B6I1 120 aa18.13■□□□□ 0.49
SHOX2-204ENST00000483851 IGHV3-30-3P0DP02 117 aa18.13■□□□□ 0.49
SHOX2-204ENST00000483851 MRAPQ8TCY5 172 aa18.12■□□□□ 0.49
SHOX2-204ENST00000483851 TRAV13-1A0A0B4J241 112 aa18.12■□□□□ 0.49
SHOX2-204ENST00000483851 IGHV3-64A0A075B6Q5 118 aa18.11■□□□□ 0.49
SHOX2-204ENST00000483851 IGHV1-58A0A0C4DH39 117 aa18.11■□□□□ 0.49
SHOX2-204ENST00000483851 TMEM262E9PQX1 116 aa18.11■□□□□ 0.49
SHOX2-204ENST00000483851 C10orf126Q8N4M7 172 aa18.11■□□□□ 0.49
SHOX2-204ENST00000483851 NANOS2P60321 138 aaKnown RBP18.1■□□□□ 0.49
SHOX2-204ENST00000483851 RBX1P62877 108 aa18.1■□□□□ 0.49
SHOX2-204ENST00000483851 OCIAD2Q56VL3 154 aa18.1■□□□□ 0.49
SHOX2-204ENST00000483851 CDKN2A-AS1Q9UH64 79 aa18.1■□□□□ 0.49
SHOX2-204ENST00000483851 DEFB131BA0A096LNP1 70 aa18.08■□□□□ 0.49
SHOX2-204ENST00000483851 COX6A2Q02221 97 aa18.07■□□□□ 0.48
SHOX2-204ENST00000483851 TRAV8-3A0A0A6YYJ7 113 aa18.07■□□□□ 0.48
SHOX2-204ENST00000483851 A0A0J9YXY3 114 aa18.06■□□□□ 0.48
SHOX2-204ENST00000483851 LYPD5Q6UWN5 251 aa18.06■□□□□ 0.48
SHOX2-204ENST00000483851 PGPEP1Q9NXJ5 209 aa18.05■□□□□ 0.48
SHOX2-204ENST00000483851 TENM3Q9P273 2699 aa18.05■□□□□ 0.48
SHOX2-204ENST00000483851 TRAV10A0A0B4J240 114 aa18.04■□□□□ 0.48
SHOX2-204ENST00000483851 CFC1BP0CG36 223 aa18.04■□□□□ 0.48
SHOX2-204ENST00000483851 CFC1P0CG37 223 aa18.04■□□□□ 0.48
SHOX2-204ENST00000483851 LITAFQ99732 161 aa18.03■□□□□ 0.48
SHOX2-204ENST00000483851 IGLV5-39A0A0G2JS06 123 aa18.03■□□□□ 0.48
SHOX2-204ENST00000483851 SPINK8P0C7L1 97 aa18.03■□□□□ 0.48
SHOX2-204ENST00000483851 KRTAP21-3Q3LHN1 58 aa18.03■□□□□ 0.48
SHOX2-204ENST00000483851 B9D2Q9BPU9 175 aa18.03■□□□□ 0.48
SHOX2-204ENST00000483851 TSPAN13O95857 204 aa18.02■□□□□ 0.48
SHOX2-204ENST00000483851 LINC00959A0A1B0GUT2 108 aa18.01■□□□□ 0.47
SHOX2-204ENST00000483851 TMEM238C9JI98 176 aa18.01■□□□□ 0.47
SHOX2-204ENST00000483851 APOMO95445 188 aa18■□□□□ 0.47
SHOX2-204ENST00000483851 SS18Q15532 418 aa18■□□□□ 0.47
SHOX2-204ENST00000483851 ZFAND6Q6FIF0 208 aa17.99■□□□□ 0.47
SHOX2-204ENST00000483851 NDUFA12Q9UI09 145 aa17.99■□□□□ 0.47
SHOX2-204ENST00000483851 SMIM1B2RUZ4 78 aa17.99■□□□□ 0.47
SHOX2-204ENST00000483851 IGHV3OR16-9A0A0B4J2B5 98 aa17.98■□□□□ 0.47
SHOX2-204ENST00000483851 EIF4EBP3O60516 100 aaPredicted RBP17.98■□□□□ 0.47
SHOX2-204ENST00000483851 MUSTN1Q8IVN3 82 aa17.98■□□□□ 0.47
SHOX2-204ENST00000483851 A4D1N5 150 aa17.97■□□□□ 0.47
SHOX2-204ENST00000483851 C15orf53Q8NAA6 179 aa17.97■□□□□ 0.47
SHOX2-204ENST00000483851 IGKV3OR2-268A0A0C4DH90 116 aa17.96■□□□□ 0.47
SHOX2-204ENST00000483851 K7ERU9 68 aa17.96■□□□□ 0.47
SHOX2-204ENST00000483851 F8W1H4 67 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 H3BMG7 143 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 ANGP03950 147 aaKnown RBP17.95■□□□□ 0.46
SHOX2-204ENST00000483851 SPANXDQ9BXN6 97 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 SPANXCQ9NY87 97 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 RPL24P83731 157 aaKnown RBP17.95■□□□□ 0.46
SHOX2-204ENST00000483851 PRO1854Q9UHT4 67 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 PRO0461Q9UI25 63 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 CBY1Q9Y3M2 126 aa17.95■□□□□ 0.46
SHOX2-204ENST00000483851 A0A087WZ39 114 aa17.94■□□□□ 0.46
SHOX2-204ENST00000483851 LINC01561Q8N1V8 128 aa17.94■□□□□ 0.46
SHOX2-204ENST00000483851 LINC00269Q8N2A0 174 aa17.94■□□□□ 0.46
SHOX2-204ENST00000483851 A0A0B4J2C4 111 aa17.93■□□□□ 0.46
SHOX2-204ENST00000483851 REG3AQ06141 175 aa17.92■□□□□ 0.46
SHOX2-204ENST00000483851 ADAMTSL4-AS1Q5T5F5 129 aa17.92■□□□□ 0.46
SHOX2-204ENST00000483851 NDUFA1O15239 70 aa17.92■□□□□ 0.46
SHOX2-204ENST00000483851 TIMM17BO60830 172 aa17.92■□□□□ 0.46
SHOX2-204ENST00000483851 NHLRC4P0CG21 123 aaPredicted RBP17.91■□□□□ 0.46
SHOX2-204ENST00000483851 ESRGQ1W209 222 aa17.9■□□□□ 0.46
SHOX2-204ENST00000483851 PRR34Q9NV39 138 aa17.9■□□□□ 0.46
SHOX2-204ENST00000483851 IGHV3-33P01772 117 aa17.89■□□□□ 0.45
SHOX2-204ENST00000483851 WFDC2Q14508 124 aa17.89■□□□□ 0.45
SHOX2-204ENST00000483851 MIAQ16674 131 aa17.89■□□□□ 0.45
SHOX2-204ENST00000483851 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.88■□□□□ 0.45
SHOX2-204ENST00000483851 CD164L2Q6UWJ8 174 aa17.88■□□□□ 0.45
SHOX2-204ENST00000483851 RNF151Q2KHN1 245 aa17.87■□□□□ 0.45
SHOX2-204ENST00000483851 Q8N3U1 123 aa17.87■□□□□ 0.45
SHOX2-204ENST00000483851 HUWE1Q7Z6Z7 4374 aaKnown RBP17.87■□□□□ 0.45
SHOX2-204ENST00000483851 LOC107984156A0A0G2JMH3 177 aa17.86■□□□□ 0.45
SHOX2-204ENST00000483851 XCL1P47992 114 aa17.86■□□□□ 0.45
SHOX2-204ENST00000483851 LYRM7Q5U5X0 104 aa17.86■□□□□ 0.45
SHOX2-204ENST00000483851 CLPSL2Q6UWE3 100 aa17.86■□□□□ 0.45
SHOX2-204ENST00000483851 ARL17AQ8IVW1 177 aa17.86■□□□□ 0.45
SHOX2-204ENST00000483851 HERV-K104P63124 156 aa17.85■□□□□ 0.45
SHOX2-204ENST00000483851 WFDC10BQ8IUB3 73 aa17.84■□□□□ 0.45
SHOX2-204ENST00000483851 CHCHD10Q8WYQ3 142 aaPredicted RBP17.84■□□□□ 0.45
SHOX2-204ENST00000483851 SFTA2Q6UW10 78 aa17.84■□□□□ 0.45
SHOX2-204ENST00000483851 COX7B2Q8TF08 81 aa17.84■□□□□ 0.45
SHOX2-204ENST00000483851 C5orf38Q86SI9 138 aa17.83■□□□□ 0.44
SHOX2-204ENST00000483851 ZNF625Q96I27 306 aaPredicted RBP17.83■□□□□ 0.44
SHOX2-204ENST00000483851 Q9H8V8 135 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms