RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
CPNE1-224ENST00000483359 EREGO14944 169 aa11.76□□□□□ -0.53
CPNE1-224ENST00000483359 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
CPNE1-224ENST00000483359 NDUFA6P56556 154 aa11.75□□□□□ -0.53
CPNE1-224ENST00000483359 Q8N814 137 aa11.75□□□□□ -0.53
CPNE1-224ENST00000483359 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-224ENST00000483359 UBE2D1P51668 147 aa11.74□□□□□ -0.53
CPNE1-224ENST00000483359 SPATA12Q7Z6I5 190 aa11.74□□□□□ -0.53
CPNE1-224ENST00000483359 PKHD1P08F94 4074 aa11.74□□□□□ -0.53
CPNE1-224ENST00000483359 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
CPNE1-224ENST00000483359 LINC00242Q5T6M2 205 aa11.73□□□□□ -0.53
CPNE1-224ENST00000483359 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
CPNE1-224ENST00000483359 ATP5LO75964 103 aa11.72□□□□□ -0.53
CPNE1-224ENST00000483359 FABP4P15090 132 aa11.72□□□□□ -0.53
CPNE1-224ENST00000483359 COX6A2Q02221 97 aa11.72□□□□□ -0.53
CPNE1-224ENST00000483359 PMVKQ15126 192 aa11.72□□□□□ -0.53
CPNE1-224ENST00000483359 CST9LQ9H4G1 147 aa11.72□□□□□ -0.53
CPNE1-224ENST00000483359 LINC00587B1AMM8 73 aa11.71□□□□□ -0.53
CPNE1-224ENST00000483359 COX7A2LO14548 114 aa11.71□□□□□ -0.53
CPNE1-224ENST00000483359 LEPROTL1O95214 131 aa11.71□□□□□ -0.53
CPNE1-224ENST00000483359 SMIM6P0DI80 62 aa11.71□□□□□ -0.53
CPNE1-224ENST00000483359 A0A0J9YXV3 536 aa11.7□□□□□ -0.54
CPNE1-224ENST00000483359 MALP21145 153 aa11.7□□□□□ -0.54
CPNE1-224ENST00000483359 HIGD2BQ4VC39 106 aa11.7□□□□□ -0.54
CPNE1-224ENST00000483359 C15orf56Q8N910 161 aa11.7□□□□□ -0.54
CPNE1-224ENST00000483359 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
CPNE1-224ENST00000483359 IGHV3OR16-9A0A0B4J2B5 98 aa11.69□□□□□ -0.54
CPNE1-224ENST00000483359 hDV102S1A0JD36 115 aa11.69□□□□□ -0.54
CPNE1-224ENST00000483359 H0Y8G0 127 aa11.69□□□□□ -0.54
CPNE1-224ENST00000483359 PRSS1P07477 247 aa11.69□□□□□ -0.54
CPNE1-224ENST00000483359 DNAH5Q8TE73 4624 aa11.69□□□□□ -0.54
CPNE1-224ENST00000483359 C14orf177Q52M58 125 aa11.68□□□□□ -0.54
CPNE1-224ENST00000483359 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
CPNE1-224ENST00000483359 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
CPNE1-224ENST00000483359 IGLV5-52A0A0A0MRZ9 124 aa11.67□□□□□ -0.54
CPNE1-224ENST00000483359 COA6Q5JTJ3 125 aaKnown RBP11.67□□□□□ -0.54
CPNE1-224ENST00000483359 HERVK_113P63121 156 aa11.66□□□□□ -0.54
CPNE1-224ENST00000483359 CFAP161Q6P656 301 aa11.66□□□□□ -0.54
CPNE1-224ENST00000483359 FAM19A3Q7Z5A8 133 aa11.66□□□□□ -0.54
CPNE1-224ENST00000483359 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.54
CPNE1-224ENST00000483359 SEC11AP67812 179 aa11.65□□□□□ -0.54
CPNE1-224ENST00000483359 CDKN2A-AS1Q9UH64 79 aa11.65□□□□□ -0.54
CPNE1-224ENST00000483359 HSPB8Q9UJY1 196 aa11.65□□□□□ -0.54
CPNE1-224ENST00000483359 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.55
CPNE1-224ENST00000483359 TINCRA0A1B0GVN0 87 aa11.64□□□□□ -0.55
CPNE1-224ENST00000483359 C16orf90A8MZG2 172 aa11.64□□□□□ -0.55
CPNE1-224ENST00000483359 IGLV4-69A0A075B6H9 119 aa11.63□□□□□ -0.55
CPNE1-224ENST00000483359 A0A087WZ39 114 aa11.63□□□□□ -0.55
CPNE1-224ENST00000483359 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-224ENST00000483359 LINC01620Q4KN68 170 aa11.63□□□□□ -0.55
CPNE1-224ENST00000483359 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
CPNE1-224ENST00000483359 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
CPNE1-224ENST00000483359 APOMO95445 188 aa11.63□□□□□ -0.55
CPNE1-224ENST00000483359 ORAOV1Q8WV07 137 aa11.63□□□□□ -0.55
CPNE1-224ENST00000483359 CHTOPQ9Y3Y2 248 aaKnown RBP11.63□□□□□ -0.55
CPNE1-224ENST00000483359 DYNC1H1Q14204 4646 aaKnown RBP11.62□□□□□ -0.55
CPNE1-224ENST00000483359 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
CPNE1-224ENST00000483359 IGLC3P0DOY3 106 aa11.61□□□□□ -0.55
CPNE1-224ENST00000483359 SPAG11BQ08648 103 aa11.61□□□□□ -0.55
CPNE1-224ENST00000483359 PACRGQ96M98 296 aaPredicted RBP11.61□□□□□ -0.55
CPNE1-224ENST00000483359 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
CPNE1-224ENST00000483359 SLPIP03973 132 aa11.61□□□□□ -0.55
CPNE1-224ENST00000483359 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
CPNE1-224ENST00000483359 MRPL35Q9NZE8 188 aaKnown RBP11.61□□□□□ -0.55
CPNE1-224ENST00000483359 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
CPNE1-224ENST00000483359 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 MAP1LC3CQ9BXW4 147 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 SPINK8P0C7L1 97 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 ODF1Q14990 250 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 PMCHL2Q9BQD1 86 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
CPNE1-224ENST00000483359 F8VRH5 84 aa11.58□□□□□ -0.56
CPNE1-224ENST00000483359 ZNF22P17026 224 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-224ENST00000483359 OR10D4PQ8NGN7 298 aa11.58□□□□□ -0.56
CPNE1-224ENST00000483359 TOMM7Q9P0U1 55 aa11.58□□□□□ -0.56
CPNE1-224ENST00000483359 GCSHP23434 173 aa11.58□□□□□ -0.56
CPNE1-224ENST00000483359 TMEM170BQ5T4T1 132 aa11.58□□□□□ -0.56
CPNE1-224ENST00000483359 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
CPNE1-224ENST00000483359 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
CPNE1-224ENST00000483359 HIST3H2BBQ8N257 126 aa11.56□□□□□ -0.56
CPNE1-224ENST00000483359 CAMK2N2Q96S95 79 aa11.56□□□□□ -0.56
CPNE1-224ENST00000483359 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-224ENST00000483359 H3BRM9 83 aa11.56□□□□□ -0.56
CPNE1-224ENST00000483359 KRTAP10-1P60331 282 aa11.56□□□□□ -0.56
CPNE1-224ENST00000483359 SNRPEP62304 92 aaKnown RBP11.56□□□□□ -0.56
CPNE1-224ENST00000483359 SYS1-DBNDD2H3BUS1 97 aa11.55□□□□□ -0.56
CPNE1-224ENST00000483359 S100A2P29034 98 aa11.55□□□□□ -0.56
CPNE1-224ENST00000483359 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
CPNE1-224ENST00000483359 KRTDAPP60985 99 aa11.54□□□□□ -0.56
CPNE1-224ENST00000483359 PRSS2P07478 247 aa11.54□□□□□ -0.56
CPNE1-224ENST00000483359 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
CPNE1-224ENST00000483359 Q6ZRU5 148 aa11.54□□□□□ -0.56
CPNE1-224ENST00000483359 CARD19Q96LW7 228 aa11.54□□□□□ -0.56
CPNE1-224ENST00000483359 C3orf79P0CE67 100 aa11.53□□□□□ -0.56
CPNE1-224ENST00000483359 KIAA0087Q14695 138 aa11.53□□□□□ -0.56
CPNE1-224ENST00000483359 C2orf82Q6UX34 121 aa11.53□□□□□ -0.56
CPNE1-224ENST00000483359 C9orf163Q8N9P6 203 aa11.53□□□□□ -0.56
CPNE1-224ENST00000483359 C5orf52A6NGY3 159 aa11.52□□□□□ -0.57
CPNE1-224ENST00000483359 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms