RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
SSR4-209ENST00000482902 TEX15Q9BXT5 2789 aa12.9□□□□□ -0.34
SSR4-209ENST00000482902 FAM222AQ5U5X8 452 aa12.9□□□□□ -0.34
SSR4-209ENST00000482902 DGAT2L7PQ6IED9 249 aa12.9□□□□□ -0.34
SSR4-209ENST00000482902 C1orf158Q8N1D5 194 aa12.9□□□□□ -0.34
SSR4-209ENST00000482902 C11orf44Q8N8P7 122 aa12.9□□□□□ -0.34
SSR4-209ENST00000482902 TRGV1A0A0A0MS02 117 aa12.89□□□□□ -0.35
SSR4-209ENST00000482902 A0A1B0GX51 115 aa12.89□□□□□ -0.35
SSR4-209ENST00000482902 ABCA12Q86UK0 2595 aa12.89□□□□□ -0.35
SSR4-209ENST00000482902 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
SSR4-209ENST00000482902 J3KT08 172 aa12.89□□□□□ -0.35
SSR4-209ENST00000482902 CRYGAP11844 174 aa12.88□□□□□ -0.35
SSR4-209ENST00000482902 GAGE2AQ6NT46 116 aa12.87□□□□□ -0.35
SSR4-209ENST00000482902 TRAV25A0A0B4J276 109 aa12.87□□□□□ -0.35
SSR4-209ENST00000482902 INAFM2P0DMQ5 153 aa12.87□□□□□ -0.35
SSR4-209ENST00000482902 KRTAP1-3Q8IUG1 177 aa12.87□□□□□ -0.35
SSR4-209ENST00000482902 ZNF843Q8N446 348 aa12.87□□□□□ -0.35
SSR4-209ENST00000482902 TMEM86BQ8N661 226 aa12.87□□□□□ -0.35
SSR4-209ENST00000482902 IL17DQ8TAD2 202 aa12.86□□□□□ -0.35
SSR4-209ENST00000482902 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
SSR4-209ENST00000482902 LINC00242Q5T6M2 205 aa12.85□□□□□ -0.35
SSR4-209ENST00000482902 FAM19A5Q7Z5A7 132 aaPredicted RBP12.85□□□□□ -0.35
SSR4-209ENST00000482902 DNAJC9-AS1A6NH13 148 aa12.84□□□□□ -0.35
SSR4-209ENST00000482902 SMIM1B2RUZ4 78 aa12.84□□□□□ -0.35
SSR4-209ENST00000482902 ATOX1O00244 68 aa12.84□□□□□ -0.35
SSR4-209ENST00000482902 UBR5O95071 2799 aaPredicted RBP12.84□□□□□ -0.35
SSR4-209ENST00000482902 USP24Q9UPU5 2620 aa12.84□□□□□ -0.35
SSR4-209ENST00000482902 CCL24O00175 119 aa12.83□□□□□ -0.35
SSR4-209ENST00000482902 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.35
SSR4-209ENST00000482902 Q6ZTI0 123 aa12.83□□□□□ -0.35
SSR4-209ENST00000482902 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.35
SSR4-209ENST00000482902 CYSTM1Q9H1C7 97 aa12.83□□□□□ -0.35
SSR4-209ENST00000482902 C5orf47Q569G3 176 aa12.83□□□□□ -0.36
SSR4-209ENST00000482902 Q9HAA7 133 aa12.83□□□□□ -0.36
SSR4-209ENST00000482902 AKAP9Q99996 3911 aa12.82□□□□□ -0.36
SSR4-209ENST00000482902 K7EQD1 137 aa12.82□□□□□ -0.36
SSR4-209ENST00000482902 MALP21145 153 aa12.82□□□□□ -0.36
SSR4-209ENST00000482902 hADV29S1A0JD25 119 aa12.82□□□□□ -0.36
SSR4-209ENST00000482902 PRIMA1Q86XR5 153 aa12.82□□□□□ -0.36
SSR4-209ENST00000482902 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
SSR4-209ENST00000482902 TLN2Q9Y4G6 2542 aa12.81□□□□□ -0.36
SSR4-209ENST00000482902 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
SSR4-209ENST00000482902 RPS28P62857 69 aaKnown RBP12.81□□□□□ -0.36
SSR4-209ENST00000482902 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
SSR4-209ENST00000482902 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
SSR4-209ENST00000482902 ZNF469Q96JG9 3925 aaPredicted RBP12.8□□□□□ -0.36
SSR4-209ENST00000482902 FAM19A3Q7Z5A8 133 aa12.8□□□□□ -0.36
SSR4-209ENST00000482902 CHD6Q8TD26 2715 aa12.8□□□□□ -0.36
SSR4-209ENST00000482902 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
SSR4-209ENST00000482902 HIST2H2BCQ6DN03 193 aa12.79□□□□□ -0.36
SSR4-209ENST00000482902 ESM1Q9NQ30 184 aa12.79□□□□□ -0.36
SSR4-209ENST00000482902 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
SSR4-209ENST00000482902 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
SSR4-209ENST00000482902 WFDC11Q8NEX6 87 aa12.79□□□□□ -0.36
SSR4-209ENST00000482902 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
SSR4-209ENST00000482902 C9orf129Q5T035 196 aaKnown RBP12.78□□□□□ -0.36
SSR4-209ENST00000482902 SONP18583 2426 aaKnown RBP12.78□□□□□ -0.36
SSR4-209ENST00000482902 F5H768 121 aa12.77□□□□□ -0.37
SSR4-209ENST00000482902 WNK1Q9H4A3 2382 aa12.77□□□□□ -0.37
SSR4-209ENST00000482902 DNAL4O96015 105 aa12.76□□□□□ -0.37
SSR4-209ENST00000482902 CDC42SE2Q9NRR3 84 aa12.76□□□□□ -0.37
SSR4-209ENST00000482902 PF4P02776 101 aa12.75□□□□□ -0.37
SSR4-209ENST00000482902 LINC00337Q8N6G1 96 aa12.75□□□□□ -0.37
SSR4-209ENST00000482902 TRAV13-2A0A0B4J235 113 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 GIG44P09565 113 aaPredicted RBP12.74□□□□□ -0.37
SSR4-209ENST00000482902 Q6JHZ5 121 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 UPK3BQ9BT76 320 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 C14orf132Q9NPU4 83 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 A0A087WYN8 130 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 IGKV3D-7A0A0C4DH55 119 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 CRPP02741 224 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 WFDC10AQ9H1F0 79 aa12.74□□□□□ -0.37
SSR4-209ENST00000482902 OBSCN-AS1Q96MR7 158 aa12.73□□□□□ -0.37
SSR4-209ENST00000482902 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
SSR4-209ENST00000482902 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
SSR4-209ENST00000482902 LINC00846Q9NV44 126 aa12.73□□□□□ -0.37
SSR4-209ENST00000482902 APCP25054 2843 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 UBE2L6O14933 153 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 SERP2Q8N6R1 65 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 KIR2DL5BQ8NHK3 375 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 RPL35AP18077 110 aaKnown RBP12.72□□□□□ -0.37
SSR4-209ENST00000482902 TMEM258P61165 79 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 ITPR3Q14573 2671 aa12.72□□□□□ -0.37
SSR4-209ENST00000482902 PLAC8L1A1L4L8 177 aa12.71□□□□□ -0.37
SSR4-209ENST00000482902 OR13C6PQ8NH95 151 aa12.71□□□□□ -0.37
SSR4-209ENST00000482902 C16orf74Q96GX8 76 aa12.71□□□□□ -0.37
SSR4-209ENST00000482902 A0A087WVE0 104 aa12.71□□□□□ -0.38
SSR4-209ENST00000482902 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.38
SSR4-209ENST00000482902 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.38
SSR4-209ENST00000482902 DPH3Q96FX2 82 aa12.71□□□□□ -0.38
SSR4-209ENST00000482902 LINC01561Q8N1V8 128 aa12.7□□□□□ -0.38
SSR4-209ENST00000482902 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
SSR4-209ENST00000482902 SMIM11BQ8TCY0 68 aa12.7□□□□□ -0.38
SSR4-209ENST00000482902 OXTP01178 125 aa12.69□□□□□ -0.38
SSR4-209ENST00000482902 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
SSR4-209ENST00000482902 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
SSR4-209ENST00000482902 NF1P21359 2839 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms