RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 C5orf38Q86SI9 138 aa13.53□□□□□ -0.24
SEC13-217ENST00000482647 AMELXQ99217 191 aa13.53□□□□□ -0.24
SEC13-217ENST00000482647 APOMO95445 188 aa13.52□□□□□ -0.25
SEC13-217ENST00000482647 LINC00614P0C842 121 aa13.52□□□□□ -0.25
SEC13-217ENST00000482647 RAB5BP61020 215 aa13.52□□□□□ -0.25
SEC13-217ENST00000482647 IGHV3OR16-9A0A0B4J2B5 98 aa13.51□□□□□ -0.25
SEC13-217ENST00000482647 ZNF561-AS1K7EIQ3 104 aa13.51□□□□□ -0.25
SEC13-217ENST00000482647 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
SEC13-217ENST00000482647 UBE2D1P51668 147 aa13.5□□□□□ -0.25
SEC13-217ENST00000482647 LINC00242Q5T6M2 205 aa13.5□□□□□ -0.25
SEC13-217ENST00000482647 ZC2HC1BQ5TFG8 222 aa13.5□□□□□ -0.25
SEC13-217ENST00000482647 SDIM1Q6ZPB5 146 aa13.49□□□□□ -0.25
SEC13-217ENST00000482647 LINC00173Q6ZV60 143 aa13.49□□□□□ -0.25
SEC13-217ENST00000482647 URB1-AS1Q96HZ7 61 aa13.48□□□□□ -0.25
SEC13-217ENST00000482647 HAMPP81172 84 aa13.47□□□□□ -0.25
SEC13-217ENST00000482647 Q8N1X5 172 aa13.47□□□□□ -0.25
SEC13-217ENST00000482647 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
SEC13-217ENST00000482647 COLCA2A8K830 154 aa13.46□□□□□ -0.25
SEC13-217ENST00000482647 COX6A2Q02221 97 aa13.46□□□□□ -0.25
SEC13-217ENST00000482647 OR10D4PQ8NGN7 298 aa13.46□□□□□ -0.25
SEC13-217ENST00000482647 CHAC1Q9BUX1 264 aa13.46□□□□□ -0.25
SEC13-217ENST00000482647 IGLV4-69A0A075B6H9 119 aa13.45□□□□□ -0.26
SEC13-217ENST00000482647 A0A087WZ39 114 aa13.45□□□□□ -0.26
SEC13-217ENST00000482647 TRGC2P03986 189 aa13.45□□□□□ -0.26
SEC13-217ENST00000482647 SEC11AP67812 179 aa13.45□□□□□ -0.26
SEC13-217ENST00000482647 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.44□□□□□ -0.26
SEC13-217ENST00000482647 HBDP02042 147 aa13.44□□□□□ -0.26
SEC13-217ENST00000482647 SYCNQ0VAF6 134 aa13.44□□□□□ -0.26
SEC13-217ENST00000482647 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
SEC13-217ENST00000482647 PCLOQ9Y6V0 5065 aa13.44□□□□□ -0.26
SEC13-217ENST00000482647 ABCA13Q86UQ4 5058 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 FAT1Q14517 4588 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 ORAOV1Q8WV07 137 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 CHCHD1Q96BP2 118 aaKnown RBP13.43□□□□□ -0.26
SEC13-217ENST00000482647 C2orf48Q96LS8 159 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 KRTAP17-1Q9BYP8 105 aa13.43□□□□□ -0.26
SEC13-217ENST00000482647 A0A096LNJ9 63 aa13.42□□□□□ -0.26
SEC13-217ENST00000482647 HERVK_113P63121 156 aa13.42□□□□□ -0.26
SEC13-217ENST00000482647 SCXQ7RTU7 201 aa13.42□□□□□ -0.26
SEC13-217ENST00000482647 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
SEC13-217ENST00000482647 CST9LQ9H4G1 147 aa13.42□□□□□ -0.26
SEC13-217ENST00000482647 GEMIN7Q9H840 131 aaKnown RBP13.42□□□□□ -0.26
SEC13-217ENST00000482647 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
SEC13-217ENST00000482647 PMVKQ15126 192 aa13.41□□□□□ -0.26
SEC13-217ENST00000482647 PMCHL1Q16048 86 aa13.41□□□□□ -0.26
SEC13-217ENST00000482647 BAGE3Q86Y29 109 aa13.41□□□□□ -0.26
SEC13-217ENST00000482647 LINC01561Q8N1V8 128 aa13.41□□□□□ -0.26
SEC13-217ENST00000482647 F8WDY8 70 aa13.4□□□□□ -0.26
SEC13-217ENST00000482647 CIRBP-AS1Q8TBR5 109 aa13.4□□□□□ -0.26
SEC13-217ENST00000482647 PKIGQ9Y2B9 76 aa13.4□□□□□ -0.26
SEC13-217ENST00000482647 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.4□□□□□ -0.26
SEC13-217ENST00000482647 A0A0J9YXV3 536 aa13.39□□□□□ -0.27
SEC13-217ENST00000482647 SCO1O75880 301 aa13.39□□□□□ -0.27
SEC13-217ENST00000482647 PDZD11Q5EBL8 140 aa13.39□□□□□ -0.27
SEC13-217ENST00000482647 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
SEC13-217ENST00000482647 EPM2AB3EWF7 344 aa13.38□□□□□ -0.27
SEC13-217ENST00000482647 FAM229AH3BQW9 127 aa13.38□□□□□ -0.27
SEC13-217ENST00000482647 ATP5LO75964 103 aa13.38□□□□□ -0.27
SEC13-217ENST00000482647 Q6ZRU5 148 aa13.38□□□□□ -0.27
SEC13-217ENST00000482647 NDUFA6P56556 154 aa13.37□□□□□ -0.27
SEC13-217ENST00000482647 TINCRA0A1B0GVN0 87 aa13.36□□□□□ -0.27
SEC13-217ENST00000482647 PANO1I0J062 215 aa13.36□□□□□ -0.27
SEC13-217ENST00000482647 CIRBPQ14011 172 aaKnown RBP13.36□□□□□ -0.27
SEC13-217ENST00000482647 KRTAP4-5Q9BYR2 181 aa13.36□□□□□ -0.27
SEC13-217ENST00000482647 CDKN2A-AS1Q9UH64 79 aa13.36□□□□□ -0.27
SEC13-217ENST00000482647 NDUFA1O15239 70 aa13.35□□□□□ -0.27
SEC13-217ENST00000482647 HSBP1O75506 76 aa13.35□□□□□ -0.27
SEC13-217ENST00000482647 Q5VSD8 79 aa13.35□□□□□ -0.27
SEC13-217ENST00000482647 LINC00469Q8N7U9 141 aa13.35□□□□□ -0.27
SEC13-217ENST00000482647 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
SEC13-217ENST00000482647 KIAA0087Q14695 138 aa13.34□□□□□ -0.27
SEC13-217ENST00000482647 SPACA4Q8TDM5 124 aa13.34□□□□□ -0.27
SEC13-217ENST00000482647 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
SEC13-217ENST00000482647 LINC00474Q9P2X8 69 aa13.34□□□□□ -0.27
SEC13-217ENST00000482647 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
SEC13-217ENST00000482647 RNF151Q2KHN1 245 aa13.33□□□□□ -0.28
SEC13-217ENST00000482647 MRPL35Q9NZE8 188 aaKnown RBP13.33□□□□□ -0.28
SEC13-217ENST00000482647 LOC107984640A0A0U1RRK4 108 aa13.32□□□□□ -0.28
SEC13-217ENST00000482647 PRSS2P07478 247 aa13.32□□□□□ -0.28
SEC13-217ENST00000482647 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
SEC13-217ENST00000482647 MAJINQ3KP22 176 aa13.31□□□□□ -0.28
SEC13-217ENST00000482647 UNQ6190/PRO20217Q6UXQ8 127 aa13.31□□□□□ -0.28
SEC13-217ENST00000482647 LINC00528Q8N1L1 170 aa13.31□□□□□ -0.28
SEC13-217ENST00000482647 A0A096LNI7 61 aa13.3□□□□□ -0.28
SEC13-217ENST00000482647 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
SEC13-217ENST00000482647 TOMM7Q9P0U1 55 aa13.3□□□□□ -0.28
SEC13-217ENST00000482647 A0A087WYN8 130 aa13.29□□□□□ -0.28
SEC13-217ENST00000482647 SERF1AO75920 110 aa13.29□□□□□ -0.28
SEC13-217ENST00000482647 IGLC3P0DOY3 106 aa13.29□□□□□ -0.28
SEC13-217ENST00000482647 C10orf25Q5T742 122 aa13.29□□□□□ -0.28
SEC13-217ENST00000482647 Q8IZM0 81 aa13.29□□□□□ -0.28
SEC13-217ENST00000482647 FAM19A2Q8N3H0 131 aa13.29□□□□□ -0.28
SEC13-217ENST00000482647 H3BRM9 83 aa13.28□□□□□ -0.28
SEC13-217ENST00000482647 CKS1BP61024 79 aa13.28□□□□□ -0.28
SEC13-217ENST00000482647 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
SEC13-217ENST00000482647 SRRM2Q9UQ35 2752 aaKnown RBP13.27□□□□□ -0.28
SEC13-217ENST00000482647 VPS13BQ7Z7G8 4022 aa13.27□□□□□ -0.28
SEC13-217ENST00000482647 PLA2G1BP04054 148 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms