RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 C5orf52A6NGY3 159 aa13.7□□□□□ -0.22
VPS16-207ENST00000481812 MAP1LC3CQ9BXW4 147 aa13.7□□□□□ -0.22
VPS16-207ENST00000481812 RYR3Q15413 4870 aa13.7□□□□□ -0.22
VPS16-207ENST00000481812 A0A0J9YXV3 536 aa13.69□□□□□ -0.22
VPS16-207ENST00000481812 COX6A2Q02221 97 aa13.69□□□□□ -0.22
VPS16-207ENST00000481812 TNP2Q05952 138 aa13.69□□□□□ -0.22
VPS16-207ENST00000481812 LINC01561Q8N1V8 128 aa13.69□□□□□ -0.22
VPS16-207ENST00000481812 A0A087WTM6 91 aa13.68□□□□□ -0.22
VPS16-207ENST00000481812 COX7A2LO14548 114 aa13.68□□□□□ -0.22
VPS16-207ENST00000481812 IGLC3P0DOY3 106 aa13.68□□□□□ -0.22
VPS16-207ENST00000481812 SNRPEP62304 92 aaKnown RBP13.68□□□□□ -0.22
VPS16-207ENST00000481812 CFAP161Q6P656 301 aa13.68□□□□□ -0.22
VPS16-207ENST00000481812 GEMIN7Q9H840 131 aaKnown RBP13.68□□□□□ -0.22
VPS16-207ENST00000481812 A0A087WZ39 114 aa13.67□□□□□ -0.22
VPS16-207ENST00000481812 S100A2P29034 98 aa13.67□□□□□ -0.22
VPS16-207ENST00000481812 SPATA12Q7Z6I5 190 aa13.67□□□□□ -0.22
VPS16-207ENST00000481812 CHTOPQ9Y3Y2 248 aaKnown RBP13.67□□□□□ -0.22
VPS16-207ENST00000481812 IGLV4-69A0A075B6H9 119 aa13.66□□□□□ -0.22
VPS16-207ENST00000481812 IGLV5-45A0A087WSX0 123 aa13.66□□□□□ -0.22
VPS16-207ENST00000481812 F8VRH5 84 aa13.66□□□□□ -0.22
VPS16-207ENST00000481812 EREGO14944 169 aa13.66□□□□□ -0.22
VPS16-207ENST00000481812 C14orf177Q52M58 125 aa13.66□□□□□ -0.22
VPS16-207ENST00000481812 USP17L23D6RBM5 183 aa13.65□□□□□ -0.22
VPS16-207ENST00000481812 ODF1Q14990 250 aa13.65□□□□□ -0.22
VPS16-207ENST00000481812 C5orf38Q86SI9 138 aa13.65□□□□□ -0.22
VPS16-207ENST00000481812 FAT2Q9NYQ8 4349 aa13.64□□□□□ -0.23
VPS16-207ENST00000481812 IGHV1-58A0A0C4DH39 117 aa13.64□□□□□ -0.23
VPS16-207ENST00000481812 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
VPS16-207ENST00000481812 APOMO95445 188 aa13.64□□□□□ -0.23
VPS16-207ENST00000481812 HIST1H2BLQ99880 126 aa13.64□□□□□ -0.23
VPS16-207ENST00000481812 MALP21145 153 aa13.63□□□□□ -0.23
VPS16-207ENST00000481812 WFDC2Q14508 124 aa13.63□□□□□ -0.23
VPS16-207ENST00000481812 PET117Q6UWS5 81 aa13.63□□□□□ -0.23
VPS16-207ENST00000481812 C15orf56Q8N910 161 aa13.63□□□□□ -0.23
VPS16-207ENST00000481812 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
VPS16-207ENST00000481812 MRPL35Q9NZE8 188 aaKnown RBP13.63□□□□□ -0.23
VPS16-207ENST00000481812 CDKN2A-AS1Q9UH64 79 aa13.63□□□□□ -0.23
VPS16-207ENST00000481812 C3orf79P0CE67 100 aa13.62□□□□□ -0.23
VPS16-207ENST00000481812 H0Y8G0 127 aa13.61□□□□□ -0.23
VPS16-207ENST00000481812 LECT2O14960 151 aa13.61□□□□□ -0.23
VPS16-207ENST00000481812 LINC00469Q8N7U9 141 aa13.61□□□□□ -0.23
VPS16-207ENST00000481812 Q8N814 137 aa13.61□□□□□ -0.23
VPS16-207ENST00000481812 IGHV3-64A0A075B6Q5 118 aa13.6□□□□□ -0.23
VPS16-207ENST00000481812 GVQW2A0A096LPI5 108 aaPredicted RBP13.6□□□□□ -0.23
VPS16-207ENST00000481812 C11orf86A6NJI1 115 aa13.6□□□□□ -0.23
VPS16-207ENST00000481812 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
VPS16-207ENST00000481812 H3BRM9 83 aa13.59□□□□□ -0.23
VPS16-207ENST00000481812 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
VPS16-207ENST00000481812 PLNP26678 52 aa13.59□□□□□ -0.23
VPS16-207ENST00000481812 LINC01545Q5VT33 79 aa13.59□□□□□ -0.23
VPS16-207ENST00000481812 TMA7Q9Y2S6 64 aaKnown RBP13.58□□□□□ -0.24
VPS16-207ENST00000481812 A0A1B0GVY2 172 aa13.57□□□□□ -0.24
VPS16-207ENST00000481812 DPM2O94777 84 aa13.57□□□□□ -0.24
VPS16-207ENST00000481812 KRTDAPP60985 99 aa13.57□□□□□ -0.24
VPS16-207ENST00000481812 NTN5Q8WTR8 489 aaPredicted RBP13.57□□□□□ -0.24
VPS16-207ENST00000481812 hDV102S1A0JD36 115 aa13.55□□□□□ -0.24
VPS16-207ENST00000481812 SMIM1B2RUZ4 78 aa13.55□□□□□ -0.24
VPS16-207ENST00000481812 IGKCP01834 107 aa13.55□□□□□ -0.24
VPS16-207ENST00000481812 TMEM170BQ5T4T1 132 aa13.55□□□□□ -0.24
VPS16-207ENST00000481812 ORAOV1Q8WV07 137 aa13.55□□□□□ -0.24
VPS16-207ENST00000481812 PGPEP1Q9NXJ5 209 aa13.55□□□□□ -0.24
VPS16-207ENST00000481812 F8WDY8 70 aa13.54□□□□□ -0.24
VPS16-207ENST00000481812 ZNF561-AS1K7EIQ3 104 aa13.54□□□□□ -0.24
VPS16-207ENST00000481812 AKR1D1P51857 326 aa13.54□□□□□ -0.24
VPS16-207ENST00000481812 C2orf48Q96LS8 159 aa13.54□□□□□ -0.24
VPS16-207ENST00000481812 PKD1P98161 4303 aa13.54□□□□□ -0.24
VPS16-207ENST00000481812 C20orf202A1L168 122 aa13.53□□□□□ -0.24
VPS16-207ENST00000481812 CNBPP62633 177 aaKnown RBP13.53□□□□□ -0.24
VPS16-207ENST00000481812 HIGD2BQ4VC39 106 aa13.53□□□□□ -0.24
VPS16-207ENST00000481812 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
VPS16-207ENST00000481812 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
VPS16-207ENST00000481812 SPAG11BQ08648 103 aa13.52□□□□□ -0.25
VPS16-207ENST00000481812 KIAA0087Q14695 138 aa13.52□□□□□ -0.25
VPS16-207ENST00000481812 Q8IZM0 81 aa13.52□□□□□ -0.25
VPS16-207ENST00000481812 PMCHL2Q9BQD1 86 aa13.52□□□□□ -0.25
VPS16-207ENST00000481812 DNAH11Q96DT5 4516 aa13.52□□□□□ -0.25
VPS16-207ENST00000481812 TMEM223A0PJW6 202 aa13.51□□□□□ -0.25
VPS16-207ENST00000481812 SPINK8P0C7L1 97 aa13.51□□□□□ -0.25
VPS16-207ENST00000481812 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.5□□□□□ -0.25
VPS16-207ENST00000481812 HECTD4Q9Y4D8 3996 aa13.49□□□□□ -0.25
VPS16-207ENST00000481812 PRSS2P07478 247 aa13.49□□□□□ -0.25
VPS16-207ENST00000481812 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
VPS16-207ENST00000481812 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.48□□□□□ -0.25
VPS16-207ENST00000481812 SLPIP03973 132 aa13.48□□□□□ -0.25
VPS16-207ENST00000481812 C6orf226Q5I0X4 101 aa13.47□□□□□ -0.25
VPS16-207ENST00000481812 COX7B2Q8TF08 81 aa13.47□□□□□ -0.25
VPS16-207ENST00000481812 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
VPS16-207ENST00000481812 IGLV5-52A0A0A0MRZ9 124 aa13.46□□□□□ -0.25
VPS16-207ENST00000481812 CXCL5P42830 114 aa13.46□□□□□ -0.25
VPS16-207ENST00000481812 HERVK_113P61574 105 aa13.46□□□□□ -0.25
VPS16-207ENST00000481812 SYCNQ0VAF6 134 aa13.46□□□□□ -0.25
VPS16-207ENST00000481812 C9orf163Q8N9P6 203 aa13.46□□□□□ -0.25
VPS16-207ENST00000481812 TOMM7Q9P0U1 55 aa13.46□□□□□ -0.25
VPS16-207ENST00000481812 NDUFA1O15239 70 aa13.45□□□□□ -0.26
VPS16-207ENST00000481812 CAMK2N2Q96S95 79 aa13.45□□□□□ -0.26
VPS16-207ENST00000481812 RNF151Q2KHN1 245 aa13.44□□□□□ -0.26
VPS16-207ENST00000481812 CARD19Q96LW7 228 aa13.44□□□□□ -0.26
VPS16-207ENST00000481812 CKS1BP61024 79 aa13.42□□□□□ -0.26
VPS16-207ENST00000481812 SFTA2Q6UW10 78 aa13.42□□□□□ -0.26
VPS16-207ENST00000481812 Q6ZRU5 148 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms