RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 AMELXQ99217 191 aa13.68□□□□□ -0.22
CCM2-214ENST00000481194 H3BMG7 143 aa13.67□□□□□ -0.22
CCM2-214ENST00000481194 H3BNG1 76 aa13.67□□□□□ -0.22
CCM2-214ENST00000481194 X6R8D5 127 aa13.67□□□□□ -0.22
CCM2-214ENST00000481194 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
CCM2-214ENST00000481194 Q8IZM0 81 aa13.67□□□□□ -0.22
CCM2-214ENST00000481194 SYCNQ0VAF6 134 aa13.67□□□□□ -0.22
CCM2-214ENST00000481194 LINC00315P59091 139 aa13.66□□□□□ -0.22
CCM2-214ENST00000481194 POLQO75417 2590 aa13.66□□□□□ -0.22
CCM2-214ENST00000481194 NCR3O14931 201 aa13.66□□□□□ -0.22
CCM2-214ENST00000481194 FASNP49327 2511 aaKnown RBP13.66□□□□□ -0.22
CCM2-214ENST00000481194 COX17Q14061 63 aa13.66□□□□□ -0.22
CCM2-214ENST00000481194 LINC01561Q8N1V8 128 aa13.65□□□□□ -0.22
CCM2-214ENST00000481194 DIRC1Q969H9 104 aa13.65□□□□□ -0.22
CCM2-214ENST00000481194 NACAE9PAV3 2078 aa13.65□□□□□ -0.22
CCM2-214ENST00000481194 F8WDY8 70 aa13.64□□□□□ -0.23
CCM2-214ENST00000481194 TP73-AS1Q9UF72 201 aa13.64□□□□□ -0.23
CCM2-214ENST00000481194 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
CCM2-214ENST00000481194 IGKV2D-26A0A0A0MRZ7 120 aa13.63□□□□□ -0.23
CCM2-214ENST00000481194 IGLV4-69A0A075B6H9 119 aa13.63□□□□□ -0.23
CCM2-214ENST00000481194 C9orf153Q5TBE3 101 aa13.63□□□□□ -0.23
CCM2-214ENST00000481194 LYPD5Q6UWN5 251 aa13.62□□□□□ -0.23
CCM2-214ENST00000481194 SORL1Q92673 2214 aa13.62□□□□□ -0.23
CCM2-214ENST00000481194 KRTAP10-3P60369 221 aa13.62□□□□□ -0.23
CCM2-214ENST00000481194 HAMPP81172 84 aa13.62□□□□□ -0.23
CCM2-214ENST00000481194 LINC00308Q8TCZ7 52 aa13.62□□□□□ -0.23
CCM2-214ENST00000481194 CDH23Q9H251 3354 aa13.61□□□□□ -0.23
CCM2-214ENST00000481194 A0A096LNJ9 63 aa13.61□□□□□ -0.23
CCM2-214ENST00000481194 MAPKAPK5-AS1Q8N8E1 139 aa13.61□□□□□ -0.23
CCM2-214ENST00000481194 CELA1Q9UNI1 258 aa13.6□□□□□ -0.23
CCM2-214ENST00000481194 A0A087WZ39 114 aa13.6□□□□□ -0.23
CCM2-214ENST00000481194 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
CCM2-214ENST00000481194 ACYP1P07311 99 aa13.59□□□□□ -0.23
CCM2-214ENST00000481194 LINC00694P0DN24 101 aa13.59□□□□□ -0.23
CCM2-214ENST00000481194 TAX1BP3O14907 124 aa13.58□□□□□ -0.23
CCM2-214ENST00000481194 BAALC-AS2P0C853 105 aa13.58□□□□□ -0.23
CCM2-214ENST00000481194 ANKRD29Q8N6D5 301 aa13.58□□□□□ -0.24
CCM2-214ENST00000481194 Q8NAQ8 132 aa13.56□□□□□ -0.24
CCM2-214ENST00000481194 IGLV4-60A0A075B6I1 120 aa13.56□□□□□ -0.24
CCM2-214ENST00000481194 TRBV30A0A0K0K1B3 111 aa13.56□□□□□ -0.24
CCM2-214ENST00000481194 UBE2AP49459 152 aa13.55□□□□□ -0.24
CCM2-214ENST00000481194 SMIM1B2RUZ4 78 aa13.55□□□□□ -0.24
CCM2-214ENST00000481194 COX7BP24311 80 aa13.55□□□□□ -0.24
CCM2-214ENST00000481194 LOC107984640A0A0U1RRK4 108 aa13.55□□□□□ -0.24
CCM2-214ENST00000481194 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
CCM2-214ENST00000481194 PRUNE2Q8WUY3 3088 aa13.54□□□□□ -0.24
CCM2-214ENST00000481194 JMJD1CQ15652 2540 aa13.54□□□□□ -0.24
CCM2-214ENST00000481194 SBSPONQ8IVN8 264 aa13.53□□□□□ -0.24
CCM2-214ENST00000481194 A8MZ25 164 aa13.53□□□□□ -0.24
CCM2-214ENST00000481194 CSNK1G2-AS1Q8NCQ2 148 aa13.53□□□□□ -0.24
CCM2-214ENST00000481194 LY6G6CO95867 125 aa13.51□□□□□ -0.25
CCM2-214ENST00000481194 C19orf73Q9NVV2 129 aa13.51□□□□□ -0.25
CCM2-214ENST00000481194 LINC00474Q9P2X8 69 aa13.51□□□□□ -0.25
CCM2-214ENST00000481194 H3BT86 120 aa13.51□□□□□ -0.25
CCM2-214ENST00000481194 EGFEM1PQ0D2K5 195 aa13.5□□□□□ -0.25
CCM2-214ENST00000481194 C2orf91Q6ZV80 131 aa13.5□□□□□ -0.25
CCM2-214ENST00000481194 USP24Q9UPU5 2620 aa13.5□□□□□ -0.25
CCM2-214ENST00000481194 B9D2Q9BPU9 175 aa13.5□□□□□ -0.25
CCM2-214ENST00000481194 IGKV2-24A0A0C4DH68 120 aa13.49□□□□□ -0.25
CCM2-214ENST00000481194 PRRC2CQ9Y520 2896 aaKnown RBP13.49□□□□□ -0.25
CCM2-214ENST00000481194 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
CCM2-214ENST00000481194 SPATA3Q8NHX4 192 aa13.49□□□□□ -0.25
CCM2-214ENST00000481194 JMJD7-PLA2G4BH0Y9G9 81 aa13.48□□□□□ -0.25
CCM2-214ENST00000481194 AKAP13Q12802 2813 aa13.48□□□□□ -0.25
CCM2-214ENST00000481194 LINC01556Q5JQF7 62 aa13.48□□□□□ -0.25
CCM2-214ENST00000481194 C2orf48Q96LS8 159 aa13.48□□□□□ -0.25
CCM2-214ENST00000481194 M0R378 163 aa13.48□□□□□ -0.25
CCM2-214ENST00000481194 COX6A2Q02221 97 aa13.48□□□□□ -0.25
CCM2-214ENST00000481194 WFDC10BQ8IUB3 73 aa13.47□□□□□ -0.25
CCM2-214ENST00000481194 LECT2O14960 151 aa13.47□□□□□ -0.25
CCM2-214ENST00000481194 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
CCM2-214ENST00000481194 TRACP01848 142 aa13.47□□□□□ -0.25
CCM2-214ENST00000481194 FUSP35637 526 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCM2-214ENST00000481194 TMEM256-PLSCR3K7ERE1 68 aa13.46□□□□□ -0.25
CCM2-214ENST00000481194 CR1P17927 2039 aa13.46□□□□□ -0.25
CCM2-214ENST00000481194 SZT2Q5T011 3432 aa13.45□□□□□ -0.26
CCM2-214ENST00000481194 DEFB105AQ8NG35 78 aa13.45□□□□□ -0.26
CCM2-214ENST00000481194 LAMA2P24043 3122 aaKnown RBP13.45□□□□□ -0.26
CCM2-214ENST00000481194 ACANP16112 2415 aa13.45□□□□□ -0.26
CCM2-214ENST00000481194 MTORP42345 2549 aa13.45□□□□□ -0.26
CCM2-214ENST00000481194 NTM-AS1Q6ZSK4 140 aa13.45□□□□□ -0.26
CCM2-214ENST00000481194 TEN1Q86WV5 123 aa13.45□□□□□ -0.26
CCM2-214ENST00000481194 KRTAP10-11P60412 298 aa13.44□□□□□ -0.26
CCM2-214ENST00000481194 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
CCM2-214ENST00000481194 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.43□□□□□ -0.26
CCM2-214ENST00000481194 hADV29S1A0JD25 119 aa13.43□□□□□ -0.26
CCM2-214ENST00000481194 M0R2N4 97 aa13.43□□□□□ -0.26
CCM2-214ENST00000481194 CLEC2BQ92478 149 aa13.43□□□□□ -0.26
CCM2-214ENST00000481194 XAGE1AQ9HD64 81 aa13.43□□□□□ -0.26
CCM2-214ENST00000481194 PDE6GP18545 87 aa13.42□□□□□ -0.26
CCM2-214ENST00000481194 UNC80Q8N2C7 3258 aa13.42□□□□□ -0.26
CCM2-214ENST00000481194 F8P00451 2351 aa13.41□□□□□ -0.26
CCM2-214ENST00000481194 TRAV23DV6A0A075B6W5 121 aa13.4□□□□□ -0.26
CCM2-214ENST00000481194 AGRNO00468 2067 aa13.4□□□□□ -0.26
CCM2-214ENST00000481194 FAM19A5Q7Z5A7 132 aaPredicted RBP13.39□□□□□ -0.27
CCM2-214ENST00000481194 USP17L23D6RBM5 183 aa13.39□□□□□ -0.27
CCM2-214ENST00000481194 ESRGQ1W209 222 aa13.38□□□□□ -0.27
CCM2-214ENST00000481194 C7orf33Q8WU49 177 aa13.38□□□□□ -0.27
CCM2-214ENST00000481194 TCL1BO95988 128 aa13.38□□□□□ -0.27
CCM2-214ENST00000481194 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms