RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 GAGE6Q13070 117 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 WFDC2Q14508 124 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 PYY3Q5JQD4 70 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 ZNF664Q8N3J9 261 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 MAPKAPK5-AS1Q8N8E1 139 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 KLK12Q9UKR0 248 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 Q8N976 141 aa8.13□□□□□ -1.11
PTPRF-213ENST00000481019 AMELXQ99217 191 aa8.13□□□□□ -1.11
PTPRF-213ENST00000481019 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
PTPRF-213ENST00000481019 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
PTPRF-213ENST00000481019 FAT1Q14517 4588 aa8.13□□□□□ -1.11
PTPRF-213ENST00000481019 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
PTPRF-213ENST00000481019 IGKCP01834 107 aa8.12□□□□□ -1.11
PTPRF-213ENST00000481019 ODF1Q14990 250 aa8.12□□□□□ -1.11
PTPRF-213ENST00000481019 ENHOQ6UWT2 76 aa8.12□□□□□ -1.11
PTPRF-213ENST00000481019 RBX1P62877 108 aa8.11□□□□□ -1.11
PTPRF-213ENST00000481019 UBE2WQ96B02 151 aa8.11□□□□□ -1.11
PTPRF-213ENST00000481019 C12orf57Q99622 126 aa8.11□□□□□ -1.11
PTPRF-213ENST00000481019 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
PTPRF-213ENST00000481019 LECT2O14960 151 aa8.1□□□□□ -1.11
PTPRF-213ENST00000481019 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
PTPRF-213ENST00000481019 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
PTPRF-213ENST00000481019 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
PTPRF-213ENST00000481019 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.11
PTPRF-213ENST00000481019 TRAV8-3A0A0A6YYJ7 113 aa8.09□□□□□ -1.11
PTPRF-213ENST00000481019 PSCAO43653 123 aa8.09□□□□□ -1.11
PTPRF-213ENST00000481019 HERVK_113P61574 105 aa8.09□□□□□ -1.11
PTPRF-213ENST00000481019 HERVK_113P63121 156 aa8.09□□□□□ -1.11
PTPRF-213ENST00000481019 CLPSL2Q6UWE3 100 aa8.09□□□□□ -1.11
PTPRF-213ENST00000481019 GEMIN7Q9H840 131 aaKnown RBP8.09□□□□□ -1.11
PTPRF-213ENST00000481019 TINCRA0A1B0GVN0 87 aa8.08□□□□□ -1.12
PTPRF-213ENST00000481019 H3BRM9 83 aa8.08□□□□□ -1.12
PTPRF-213ENST00000481019 ANGP03950 147 aaKnown RBP8.08□□□□□ -1.12
PTPRF-213ENST00000481019 SS18Q15532 418 aa8.08□□□□□ -1.12
PTPRF-213ENST00000481019 Q6ZUT4 128 aa8.08□□□□□ -1.12
PTPRF-213ENST00000481019 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
PTPRF-213ENST00000481019 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
PTPRF-213ENST00000481019 IGKV2D-24A0A075B6R9 120 aa8.07□□□□□ -1.12
PTPRF-213ENST00000481019 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
PTPRF-213ENST00000481019 KRTAP26-1Q6PEX3 210 aa8.07□□□□□ -1.12
PTPRF-213ENST00000481019 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
PTPRF-213ENST00000481019 Q8N814 137 aa8.07□□□□□ -1.12
PTPRF-213ENST00000481019 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 CRPP02741 224 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 UBE2D1P51668 147 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 KRTAP10-1P60331 282 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 TM2D2Q9BX73 214 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 PRR34Q9NV39 138 aa8.06□□□□□ -1.12
PTPRF-213ENST00000481019 TRAV13-1A0A0B4J241 112 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 TSTD3H0UI37 97 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 EREGO14944 169 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 TMEM170BQ5T4T1 132 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 PGPEP1Q9NXJ5 209 aa8.05□□□□□ -1.12
PTPRF-213ENST00000481019 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 A0A0J9YXV3 536 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 REG3AQ06141 175 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 SPATA45Q537H7 98 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 VPS13BQ7Z7G8 4022 aa8.04□□□□□ -1.12
PTPRF-213ENST00000481019 IGLV10-54A0A075B6I4 117 aa8.03□□□□□ -1.12
PTPRF-213ENST00000481019 LINC00959A0A1B0GUT2 108 aa8.03□□□□□ -1.12
PTPRF-213ENST00000481019 MIAQ16674 131 aa8.03□□□□□ -1.12
PTPRF-213ENST00000481019 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
PTPRF-213ENST00000481019 LINC00469Q8N7U9 141 aa8.03□□□□□ -1.12
PTPRF-213ENST00000481019 PAM16Q9Y3D7 125 aa8.03□□□□□ -1.12
PTPRF-213ENST00000481019 IGLV5-45A0A087WSX0 123 aa8.02□□□□□ -1.13
PTPRF-213ENST00000481019 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
PTPRF-213ENST00000481019 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
PTPRF-213ENST00000481019 RMI2Q96E14 147 aa8.02□□□□□ -1.13
PTPRF-213ENST00000481019 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.01□□□□□ -1.13
PTPRF-213ENST00000481019 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 IGKV3OR2-268A0A0C4DH90 116 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 CD164L2Q6UWJ8 174 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 NTN5Q8WTR8 489 aaPredicted RBP8.01□□□□□ -1.13
PTPRF-213ENST00000481019 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
PTPRF-213ENST00000481019 hDV102S1A0JD36 115 aa8□□□□□ -1.13
PTPRF-213ENST00000481019 E9PLD3 99 aa8□□□□□ -1.13
PTPRF-213ENST00000481019 CDK2AP2O75956 126 aa8□□□□□ -1.13
PTPRF-213ENST00000481019 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
PTPRF-213ENST00000481019 HAMPP81172 84 aa8□□□□□ -1.13
PTPRF-213ENST00000481019 STPG4Q8N801 248 aa8□□□□□ -1.13
PTPRF-213ENST00000481019 COX11Q9Y6N1 276 aa8□□□□□ -1.13
PTPRF-213ENST00000481019 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 APOMO95445 188 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 GCSHP23434 173 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 XGP55808 180 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 UQCR10Q9UDW1 63 aa7.99□□□□□ -1.13
PTPRF-213ENST00000481019 A0A087WZ39 114 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms