RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CLLU1Q5K131 121 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 Q6ZN92 141 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 TMEM136Q6ZRR5 245 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 Q6ZUT4 128 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 PRELID3AQ96N28 172 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 MAP1LC3AQ9H492 121 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 HERC1Q15751 4861 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 IFITM10A6NMD0 228 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 PRSS47A8MTI9 375 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 PTTG1IPP53801 180 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 SPAG11BQ08648 103 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 ORMDL2Q53FV1 153 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 IMMP2LQ96T52 175 aa7.23□□□□□ -1.25
CCM2-213ENST00000480658 NPYP01303 97 aa7.22□□□□□ -1.25
CCM2-213ENST00000480658 PRR3P79522 188 aaKnown RBP7.22□□□□□ -1.25
CCM2-213ENST00000480658 UQCC3Q6UW78 93 aa7.22□□□□□ -1.25
CCM2-213ENST00000480658 Q6ZRP5 223 aa7.22□□□□□ -1.25
CCM2-213ENST00000480658 MRPL35Q9NZE8 188 aaKnown RBP7.22□□□□□ -1.25
CCM2-213ENST00000480658 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
CCM2-213ENST00000480658 NDUFA1O15239 70 aa7.21□□□□□ -1.26
CCM2-213ENST00000480658 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
CCM2-213ENST00000480658 REG3GQ6UW15 175 aa7.21□□□□□ -1.26
CCM2-213ENST00000480658 TEX43Q6ZNM6 134 aa7.21□□□□□ -1.26
CCM2-213ENST00000480658 TMEM141Q96I45 108 aa7.21□□□□□ -1.26
CCM2-213ENST00000480658 CYSLTR1Q9Y271 337 aa7.21□□□□□ -1.26
CCM2-213ENST00000480658 TRAV9-1A0A075B6T8 112 aa7.2□□□□□ -1.26
CCM2-213ENST00000480658 IGHV3OR16-9A0A0B4J2B5 98 aa7.2□□□□□ -1.26
CCM2-213ENST00000480658 SEC11AP67812 179 aa7.2□□□□□ -1.26
CCM2-213ENST00000480658 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
CCM2-213ENST00000480658 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
CCM2-213ENST00000480658 LINC01561Q8N1V8 128 aa7.2□□□□□ -1.26
CCM2-213ENST00000480658 NXT2Q9NPJ8 142 aaKnown RBP7.2□□□□□ -1.26
CCM2-213ENST00000480658 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
CCM2-213ENST00000480658 C5orf38Q86SI9 138 aa7.19□□□□□ -1.26
CCM2-213ENST00000480658 Q8N8P6 123 aa7.19□□□□□ -1.26
CCM2-213ENST00000480658 ORAOV1Q8WV07 137 aa7.19□□□□□ -1.26
CCM2-213ENST00000480658 CTDSP1Q9GZU7 261 aa7.19□□□□□ -1.26
CCM2-213ENST00000480658 A0A087WZ39 114 aa7.18□□□□□ -1.26
CCM2-213ENST00000480658 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
CCM2-213ENST00000480658 GAGE2BQ13066 116 aa7.18□□□□□ -1.26
CCM2-213ENST00000480658 LINC00526Q96FQ7 95 aa7.18□□□□□ -1.26
CCM2-213ENST00000480658 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
CCM2-213ENST00000480658 TRBV30A0A0K0K1B3 111 aa7.17□□□□□ -1.26
CCM2-213ENST00000480658 TLX1NBP0CAT3 122 aa7.17□□□□□ -1.26
CCM2-213ENST00000480658 S100PP25815 95 aa7.17□□□□□ -1.26
CCM2-213ENST00000480658 COX19Q49B96 90 aa7.17□□□□□ -1.26
CCM2-213ENST00000480658 IGLV4-3A0A075B6K6 122 aa7.16□□□□□ -1.26
CCM2-213ENST00000480658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
CCM2-213ENST00000480658 C2orf66Q6UXQ4 117 aa7.16□□□□□ -1.26
CCM2-213ENST00000480658 COMMD7Q86VX2 200 aa7.16□□□□□ -1.26
CCM2-213ENST00000480658 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
CCM2-213ENST00000480658 VCX2Q9H322 139 aa7.16□□□□□ -1.26
CCM2-213ENST00000480658 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
CCM2-213ENST00000480658 PRSS2P07478 247 aa7.15□□□□□ -1.26
CCM2-213ENST00000480658 HERVK_113P63121 156 aa7.15□□□□□ -1.26
CCM2-213ENST00000480658 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
CCM2-213ENST00000480658 MT-ND6P03923 174 aa7.14□□□□□ -1.27
CCM2-213ENST00000480658 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
CCM2-213ENST00000480658 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
CCM2-213ENST00000480658 TIMM17AQ99595 171 aa7.14□□□□□ -1.27
CCM2-213ENST00000480658 SEC11CQ9BY50 192 aa7.14□□□□□ -1.27
CCM2-213ENST00000480658 CXCL5P42830 114 aa7.13□□□□□ -1.27
CCM2-213ENST00000480658 UBE2D1P51668 147 aa7.13□□□□□ -1.27
CCM2-213ENST00000480658 FAM19A3Q7Z5A8 133 aa7.13□□□□□ -1.27
CCM2-213ENST00000480658 FAM104AQ969W3 186 aa7.13□□□□□ -1.27
CCM2-213ENST00000480658 AMELXQ99217 191 aa7.13□□□□□ -1.27
CCM2-213ENST00000480658 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
CCM2-213ENST00000480658 TMEM218A2RU14 115 aa7.12□□□□□ -1.27
CCM2-213ENST00000480658 NDUFC2-KCTD14E9PQ53 114 aa7.12□□□□□ -1.27
CCM2-213ENST00000480658 ADCYAP1P18509 176 aa7.12□□□□□ -1.27
CCM2-213ENST00000480658 CKS1BP61024 79 aa7.12□□□□□ -1.27
CCM2-213ENST00000480658 ODF1Q14990 250 aa7.12□□□□□ -1.27
CCM2-213ENST00000480658 GNB1LQ9BYB4 327 aa7.12□□□□□ -1.27
CCM2-213ENST00000480658 GEMIN7Q9H840 131 aaKnown RBP7.12□□□□□ -1.27
CCM2-213ENST00000480658 A0A0J9YXV3 536 aa7.11□□□□□ -1.27
CCM2-213ENST00000480658 IGIPA6NJ69 53 aa7.11□□□□□ -1.27
CCM2-213ENST00000480658 ERASQ7Z444 233 aa7.11□□□□□ -1.27
CCM2-213ENST00000480658 Q8IZM0 81 aa7.11□□□□□ -1.27
CCM2-213ENST00000480658 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
CCM2-213ENST00000480658 RHEBQ15382 184 aa7.1□□□□□ -1.27
CCM2-213ENST00000480658 TOMM6Q96B49 74 aa7.1□□□□□ -1.27
CCM2-213ENST00000480658 A0A1W2PNN7 141 aa7.09□□□□□ -1.27
CCM2-213ENST00000480658 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCM2-213ENST00000480658 C6orf226Q5I0X4 101 aa7.09□□□□□ -1.27
CCM2-213ENST00000480658 UNQ6190/PRO20217Q6UXQ8 127 aa7.09□□□□□ -1.27
CCM2-213ENST00000480658 DIRC1Q969H9 104 aa7.09□□□□□ -1.27
CCM2-213ENST00000480658 C6orf48Q9UBA6 75 aa7.09□□□□□ -1.27
CCM2-213ENST00000480658 PSORS1C2Q9UIG4 136 aa7.09□□□□□ -1.27
CCM2-213ENST00000480658 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.28
CCM2-213ENST00000480658 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
CCM2-213ENST00000480658 KIAA0087Q14695 138 aa7.08□□□□□ -1.28
CCM2-213ENST00000480658 C1orf137Q5JT78 98 aa7.08□□□□□ -1.28
CCM2-213ENST00000480658 SCGB3A1Q96QR1 104 aa7.08□□□□□ -1.28
CCM2-213ENST00000480658 ALKBH7Q9BT30 221 aaPredicted RBP7.08□□□□□ -1.28
CCM2-213ENST00000480658 SMCO4Q9NRQ5 59 aa7.08□□□□□ -1.28
CCM2-213ENST00000480658 F8VRH5 84 aa7.07□□□□□ -1.28
CCM2-213ENST00000480658 UBE2BP63146 152 aa7.07□□□□□ -1.28
CCM2-213ENST00000480658 GAGE2EQ4V326 116 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 305.1 ms