RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 SSX7Q7RTT5 188 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 TVP23CQ96ET8 276 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 FMC1Q96HJ9 113 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 HYLS1Q96M11 299 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 PRO0255Q9UI72 69 aa2.92□□□□□ -1.94
UPF3A-205ENST00000479712 MRPS16Q9Y3D3 137 aaKnown RBP2.92□□□□□ -1.94
UPF3A-205ENST00000479712 TRAV8-1A0A0A6YYK1 113 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 TRAV4A0A0B4J268 109 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 LOC389332A0A1B0GUA5 103 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 IFNA7P01567 189 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 C1QBP02746 253 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 TYMSP04818 313 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 CXCL1P09341 107 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 CRYBA4P53673 196 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 GNG5P63218 68 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 IGFL1Q6UW32 110 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 Q86TA4 180 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 ZNF471Q9BX82 626 aaPredicted RBP2.91□□□□□ -1.94
UPF3A-205ENST00000479712 LINC00588Q9Y4M8 146 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 ICOSQ9Y6W8 199 aa2.91□□□□□ -1.94
UPF3A-205ENST00000479712 A0A096LPF7 62 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 TRBV6-4A0A1B0GX49 114 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 SMLR1H3BR10 107 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 PFDN1O60925 122 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 LTAP01374 205 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 ZNF80P51504 273 aaPredicted RBP2.9□□□□□ -1.95
UPF3A-205ENST00000479712 UBE2G1P62253 170 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 FAM104BQ5XKR9 115 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 Q6ZQT7 251 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 Q6ZRN7 208 aaPredicted RBP2.9□□□□□ -1.95
UPF3A-205ENST00000479712 SCXQ7RTU7 201 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 SLC51BQ86UW2 128 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 FAM213BQ8TBF2 198 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 SFT2D1Q8WV19 159 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 SMIM12Q96EX1 92 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 MANBALQ9NQG1 85 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 MRPL16Q9NX20 251 aaKnown RBP2.9□□□□□ -1.95
UPF3A-205ENST00000479712 IL36BQ9NZH7 164 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 HHLA3Q9XRX5 114 aa2.9□□□□□ -1.95
UPF3A-205ENST00000479712 A0A087WTM6 91 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 TRGV4A0A0C4DH28 118 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 A0A0J9YY99 117 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 A8MWV9 139 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 C9JCJ5 164 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 GNRH2O43555 120 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 NDUFS6O75380 124 aaKnown RBP2.89□□□□□ -1.95
UPF3A-205ENST00000479712 MGST1P10620 155 aaKnown RBP2.89□□□□□ -1.95
UPF3A-205ENST00000479712 RNASE3P12724 160 aaKnown RBP2.89□□□□□ -1.95
UPF3A-205ENST00000479712 AKR1C3P42330 323 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 SULT1A2P50226 295 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 UBE2G2P60604 165 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 RPL37AP61513 92 aaKnown RBP2.89□□□□□ -1.95
UPF3A-205ENST00000479712 RHOHQ15669 191 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 ESRGQ1W209 222 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 FAM162BQ5T6X4 162 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 SPINT4Q6UDR6 99 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 DAZ4Q86SG3 579 aaKnown RBP2.89□□□□□ -1.95
UPF3A-205ENST00000479712 NAGKQ9UJ70 344 aa2.89□□□□□ -1.95
UPF3A-205ENST00000479712 B4DEV8 164 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 PDE6DO43924 150 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 SH2D1AO60880 128 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 IFNA1P01562 189 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 S100A4P26447 101 aaKnown RBP2.88□□□□□ -1.95
UPF3A-205ENST00000479712 SRIP30626 198 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 CRIP1P50238 77 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 RBX1P62877 108 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 CFAP126Q5VTH2 177 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 LYPD5Q6UWN5 251 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 AKAP14Q86UN6 197 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 C10orf126Q8N4M7 172 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 ZC2HC1AQ96GY0 325 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 PRADC1Q9BSG0 188 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 BIN3Q9NQY0 253 aa2.88□□□□□ -1.95
UPF3A-205ENST00000479712 TRBV10-1A0A0K0K1A3 114 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 IGHV3-53P01767 116 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 IGLV7-43P04211 117 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 SFTA3P0C7M3 94 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 ARMS2P0C7Q2 107 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 LINC00694P0DN24 101 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 BCL2P10415 239 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 RPS20P60866 119 aaKnown RBP2.87□□□□□ -1.95
UPF3A-205ENST00000479712 CCL20P78556 96 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 MEF2BQ02080 365 aaPredicted RBP2.87□□□□□ -1.95
UPF3A-205ENST00000479712 CD164Q04900 197 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 BAGE2Q86Y30 109 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 ZFP82Q8N141 532 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 C9orf62Q8N4C0 152 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 SFRP2Q96HF1 295 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 YPEL4Q96NS1 127 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 DPH3P1Q9H4G8 78 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 RBM12B-AS1Q9P1G2 102 aa2.87□□□□□ -1.95
UPF3A-205ENST00000479712 ZNF706Q9Y5V0 76 aaPredicted RBP2.87□□□□□ -1.95
UPF3A-205ENST00000479712 A0A087WWC5 75 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 TMEM250H0YL14 139 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 H3BVH4 76 aa2.86□□□□□ -1.95
UPF3A-205ENST00000479712 CRYGDP07320 174 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms