RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 PAPPA-AS1Q5QFB9 102 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 PET117Q6UWS5 81 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
CHD3-210ENST00000479080 CHTOPQ9Y3Y2 248 aaKnown RBP8.72□□□□□ -1.01
CHD3-210ENST00000479080 F8VRH5 84 aa8.71□□□□□ -1.02
CHD3-210ENST00000479080 K7EP13 123 aa8.71□□□□□ -1.02
CHD3-210ENST00000479080 C2orf88Q9BSF0 95 aa8.71□□□□□ -1.02
CHD3-210ENST00000479080 IGLV5-45A0A087WSX0 123 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 TRAV9-2A0A087WT02 112 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 IGHV3OR16-9A0A0B4J2B5 98 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
CHD3-210ENST00000479080 XCL1P47992 114 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 CHAC1Q9BUX1 264 aa8.7□□□□□ -1.02
CHD3-210ENST00000479080 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
CHD3-210ENST00000479080 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
CHD3-210ENST00000479080 TRAV8-4A0A0B4J246 113 aa8.69□□□□□ -1.02
CHD3-210ENST00000479080 WFDC2Q14508 124 aa8.69□□□□□ -1.02
CHD3-210ENST00000479080 SS18Q15532 418 aa8.69□□□□□ -1.02
CHD3-210ENST00000479080 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
CHD3-210ENST00000479080 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
CHD3-210ENST00000479080 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
CHD3-210ENST00000479080 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
CHD3-210ENST00000479080 PYY3Q5JQD4 70 aa8.67□□□□□ -1.02
CHD3-210ENST00000479080 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
CHD3-210ENST00000479080 C6orf223Q8N319 242 aa8.67□□□□□ -1.02
CHD3-210ENST00000479080 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
CHD3-210ENST00000479080 RTL8CO15255 209 aa8.66□□□□□ -1.02
CHD3-210ENST00000479080 DPM2O94777 84 aa8.66□□□□□ -1.02
CHD3-210ENST00000479080 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
CHD3-210ENST00000479080 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
CHD3-210ENST00000479080 A0A087WZ39 114 aa8.65□□□□□ -1.02
CHD3-210ENST00000479080 IGKCP01834 107 aa8.65□□□□□ -1.02
CHD3-210ENST00000479080 HERVK_113P63121 156 aa8.65□□□□□ -1.02
CHD3-210ENST00000479080 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
CHD3-210ENST00000479080 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
CHD3-210ENST00000479080 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.02
CHD3-210ENST00000479080 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
CHD3-210ENST00000479080 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
CHD3-210ENST00000479080 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
CHD3-210ENST00000479080 MAJINQ3KP22 176 aa8.64□□□□□ -1.03
CHD3-210ENST00000479080 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
CHD3-210ENST00000479080 COX7A2LO14548 114 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 SPINK8P0C7L1 97 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 PLNP26678 52 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 AKR1D1P51857 326 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 SEC11AP67812 179 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 RMI2Q96E14 147 aa8.63□□□□□ -1.03
CHD3-210ENST00000479080 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 C20orf202A1L168 122 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 LECT2O14960 151 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 STPG4Q8N801 248 aa8.62□□□□□ -1.03
CHD3-210ENST00000479080 PKD1P98161 4303 aa8.61□□□□□ -1.03
CHD3-210ENST00000479080 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
CHD3-210ENST00000479080 SCGB1D1O95968 90 aa8.61□□□□□ -1.03
CHD3-210ENST00000479080 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
CHD3-210ENST00000479080 TM2D2Q9BX73 214 aa8.61□□□□□ -1.03
CHD3-210ENST00000479080 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
CHD3-210ENST00000479080 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
CHD3-210ENST00000479080 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
CHD3-210ENST00000479080 LINC00526Q96FQ7 95 aa8.6□□□□□ -1.03
CHD3-210ENST00000479080 TNP2Q05952 138 aa8.59□□□□□ -1.03
CHD3-210ENST00000479080 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
CHD3-210ENST00000479080 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
CHD3-210ENST00000479080 EPPK1P58107 5090 aaKnown RBP8.59□□□□□ -1.03
CHD3-210ENST00000479080 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
CHD3-210ENST00000479080 SLPIP03973 132 aa8.58□□□□□ -1.04
CHD3-210ENST00000479080 NTN5Q8WTR8 489 aaPredicted RBP8.58□□□□□ -1.04
CHD3-210ENST00000479080 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
CHD3-210ENST00000479080 HECTD4Q9Y4D8 3996 aa8.57□□□□□ -1.04
CHD3-210ENST00000479080 DNAH8Q96JB1 4490 aa8.57□□□□□ -1.04
CHD3-210ENST00000479080 A0A087WTM6 91 aa8.57□□□□□ -1.04
CHD3-210ENST00000479080 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
CHD3-210ENST00000479080 E9PLD3 99 aa8.57□□□□□ -1.04
CHD3-210ENST00000479080 H3BRM9 83 aa8.57□□□□□ -1.04
CHD3-210ENST00000479080 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
CHD3-210ENST00000479080 PSCAO43653 123 aa8.56□□□□□ -1.04
CHD3-210ENST00000479080 MALP21145 153 aa8.56□□□□□ -1.04
CHD3-210ENST00000479080 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
CHD3-210ENST00000479080 LEPROTO15243 131 aa8.55□□□□□ -1.04
CHD3-210ENST00000479080 C10orf25Q5T742 122 aa8.55□□□□□ -1.04
CHD3-210ENST00000479080 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
CHD3-210ENST00000479080 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
CHD3-210ENST00000479080 Q8IZM0 81 aa8.54□□□□□ -1.04
CHD3-210ENST00000479080 COX7B2Q8TF08 81 aa8.54□□□□□ -1.04
CHD3-210ENST00000479080 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
CHD3-210ENST00000479080 APOMO95445 188 aa8.53□□□□□ -1.04
CHD3-210ENST00000479080 SMIM6P0DI80 62 aa8.53□□□□□ -1.04
CHD3-210ENST00000479080 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD3-210ENST00000479080 ZNF625Q96I27 306 aaPredicted RBP8.53□□□□□ -1.04
CHD3-210ENST00000479080 J3QQQ9 107 aa8.52□□□□□ -1.05
CHD3-210ENST00000479080 HERVK_113P61574 105 aa8.52□□□□□ -1.05
CHD3-210ENST00000479080 Q6ZRU5 148 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms