RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
PDLIM1-202ENST00000477757 GATCO43716 136 aaKnown RBP11.83□□□□□ -0.52
PDLIM1-202ENST00000477757 NUPR1O60356 82 aa11.83□□□□□ -0.52
PDLIM1-202ENST00000477757 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
PDLIM1-202ENST00000477757 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
PDLIM1-202ENST00000477757 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
PDLIM1-202ENST00000477757 CRYGAP11844 174 aa11.82□□□□□ -0.52
PDLIM1-202ENST00000477757 SUMO2P61956 95 aaKnown RBP11.82□□□□□ -0.52
PDLIM1-202ENST00000477757 CT83Q5H943 113 aa11.82□□□□□ -0.52
PDLIM1-202ENST00000477757 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
PDLIM1-202ENST00000477757 AMN1Q8IY45 258 aa11.82□□□□□ -0.52
PDLIM1-202ENST00000477757 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
PDLIM1-202ENST00000477757 TMEM18Q96B42 140 aa11.81□□□□□ -0.52
PDLIM1-202ENST00000477757 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
PDLIM1-202ENST00000477757 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
PDLIM1-202ENST00000477757 SMKR1H3BMG3 65 aa11.8□□□□□ -0.52
PDLIM1-202ENST00000477757 KIAA0087Q14695 138 aa11.8□□□□□ -0.52
PDLIM1-202ENST00000477757 NRACQ8N912 160 aa11.8□□□□□ -0.52
PDLIM1-202ENST00000477757 PPP1R17O96001 155 aa11.79□□□□□ -0.52
PDLIM1-202ENST00000477757 TAGLN2P37802 199 aaKnown RBP11.78□□□□□ -0.52
PDLIM1-202ENST00000477757 CTDSP1Q9GZU7 261 aa11.78□□□□□ -0.52
PDLIM1-202ENST00000477757 HIGD1CA8MV81 97 aa11.77□□□□□ -0.53
PDLIM1-202ENST00000477757 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
PDLIM1-202ENST00000477757 RPL28P46779 137 aaKnown RBP11.76□□□□□ -0.53
PDLIM1-202ENST00000477757 RPL39P62891 51 aaKnown RBP11.76□□□□□ -0.53
PDLIM1-202ENST00000477757 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
PDLIM1-202ENST00000477757 IGLV7-46A0A075B6I9 117 aa11.75□□□□□ -0.53
PDLIM1-202ENST00000477757 TGIF2-C20orf24A0A0A6YYL0 155 aa11.75□□□□□ -0.53
PDLIM1-202ENST00000477757 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
PDLIM1-202ENST00000477757 HBBP68871 147 aa11.75□□□□□ -0.53
PDLIM1-202ENST00000477757 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
PDLIM1-202ENST00000477757 SPANXA1Q9NS26 97 aa11.75□□□□□ -0.53
PDLIM1-202ENST00000477757 KRTAP13-2Q52LG2 175 aa11.74□□□□□ -0.53
PDLIM1-202ENST00000477757 PACRGQ96M98 296 aaPredicted RBP11.74□□□□□ -0.53
PDLIM1-202ENST00000477757 C22orf24Q9Y442 160 aa11.74□□□□□ -0.53
PDLIM1-202ENST00000477757 LBHQ53QV2 105 aaPredicted RBP11.73□□□□□ -0.53
PDLIM1-202ENST00000477757 LINC00304Q8N9R0 145 aa11.73□□□□□ -0.53
PDLIM1-202ENST00000477757 BCE1O60756 84 aa11.72□□□□□ -0.53
PDLIM1-202ENST00000477757 LINC00173Q6ZV60 143 aa11.72□□□□□ -0.53
PDLIM1-202ENST00000477757 TCAPO15273 167 aa11.71□□□□□ -0.53
PDLIM1-202ENST00000477757 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
PDLIM1-202ENST00000477757 RPL32P62910 135 aaKnown RBP11.7□□□□□ -0.54
PDLIM1-202ENST00000477757 C20orf78Q9BR46 151 aa11.7□□□□□ -0.54
PDLIM1-202ENST00000477757 TMEM250H0YL14 139 aa11.69□□□□□ -0.54
PDLIM1-202ENST00000477757 LINC01547P58512 204 aaPredicted RBP11.69□□□□□ -0.54
PDLIM1-202ENST00000477757 RIGQ13278 110 aa11.68□□□□□ -0.54
PDLIM1-202ENST00000477757 LINC00469Q8N7U9 141 aa11.68□□□□□ -0.54
PDLIM1-202ENST00000477757 TP73-AS1Q9UF72 201 aa11.68□□□□□ -0.54
PDLIM1-202ENST00000477757 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
PDLIM1-202ENST00000477757 ZNF727A8MUV8 499 aa11.67□□□□□ -0.54
PDLIM1-202ENST00000477757 FAM229BQ4G0N7 80 aa11.67□□□□□ -0.54
PDLIM1-202ENST00000477757 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
PDLIM1-202ENST00000477757 MRPL55Q7Z7F7 128 aaKnown RBP11.67□□□□□ -0.54
PDLIM1-202ENST00000477757 CTAG1AP78358 180 aa11.66□□□□□ -0.54
PDLIM1-202ENST00000477757 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
PDLIM1-202ENST00000477757 XAGE1AQ9HD64 81 aa11.66□□□□□ -0.54
PDLIM1-202ENST00000477757 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
PDLIM1-202ENST00000477757 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.54
PDLIM1-202ENST00000477757 LINC00862A6NCI5 91 aa11.64□□□□□ -0.55
PDLIM1-202ENST00000477757 RGS21Q2M5E4 152 aa11.64□□□□□ -0.55
PDLIM1-202ENST00000477757 LINC01561Q8N1V8 128 aa11.64□□□□□ -0.55
PDLIM1-202ENST00000477757 PPDPFQ9H3Y8 114 aa11.64□□□□□ -0.55
PDLIM1-202ENST00000477757 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
PDLIM1-202ENST00000477757 KRTAP13-1Q8IUC0 172 aa11.63□□□□□ -0.55
PDLIM1-202ENST00000477757 OSTCQ9NRP0 149 aa11.63□□□□□ -0.55
PDLIM1-202ENST00000477757 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
PDLIM1-202ENST00000477757 IFI27P40305 119 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1-202ENST00000477757 CKS2P33552 79 aa11.6□□□□□ -0.55
PDLIM1-202ENST00000477757 CEBPGP53567 150 aa11.6□□□□□ -0.55
PDLIM1-202ENST00000477757 CKS1BP61024 79 aa11.6□□□□□ -0.55
PDLIM1-202ENST00000477757 V9GYV3 84 aa11.6□□□□□ -0.55
PDLIM1-202ENST00000477757 IGLV4-3A0A075B6K6 122 aa11.59□□□□□ -0.55
PDLIM1-202ENST00000477757 IGKV2D-26A0A0A0MRZ7 120 aa11.59□□□□□ -0.55
PDLIM1-202ENST00000477757 PRSS2P07478 247 aa11.59□□□□□ -0.55
PDLIM1-202ENST00000477757 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
PDLIM1-202ENST00000477757 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
PDLIM1-202ENST00000477757 PYGO1Q9Y3Y4 419 aa11.59□□□□□ -0.55
PDLIM1-202ENST00000477757 RPL37AP8A6NKH3 93 aa11.58□□□□□ -0.56
PDLIM1-202ENST00000477757 SRSF3P84103 164 aaKnown RBP11.58□□□□□ -0.56
PDLIM1-202ENST00000477757 TMEM141Q96I45 108 aa11.58□□□□□ -0.56
PDLIM1-202ENST00000477757 LINC00167Q96N53 147 aa11.58□□□□□ -0.56
PDLIM1-202ENST00000477757 UBE2AP49459 152 aa11.57□□□□□ -0.56
PDLIM1-202ENST00000477757 Q8IZM0 81 aa11.57□□□□□ -0.56
PDLIM1-202ENST00000477757 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
PDLIM1-202ENST00000477757 NAT8BQ9UHF3 227 aa11.57□□□□□ -0.56
PDLIM1-202ENST00000477757 Q6ZN92 141 aa11.56□□□□□ -0.56
PDLIM1-202ENST00000477757 C6orf226Q5I0X4 101 aa11.55□□□□□ -0.56
PDLIM1-202ENST00000477757 TEX43Q6ZNM6 134 aa11.55□□□□□ -0.56
PDLIM1-202ENST00000477757 SLC51BQ86UW2 128 aa11.55□□□□□ -0.56
PDLIM1-202ENST00000477757 KRTAP4-1Q9BYQ7 146 aa11.55□□□□□ -0.56
PDLIM1-202ENST00000477757 D6R8Y8 96 aa11.54□□□□□ -0.56
PDLIM1-202ENST00000477757 NPYP01303 97 aa11.54□□□□□ -0.56
PDLIM1-202ENST00000477757 FP248Q71RG6 208 aaPredicted RBP11.54□□□□□ -0.56
PDLIM1-202ENST00000477757 EIF5A2Q9GZV4 153 aaKnown RBP11.54□□□□□ -0.56
PDLIM1-202ENST00000477757 F8VRH5 84 aa11.53□□□□□ -0.56
PDLIM1-202ENST00000477757 A0A1B0GW15 77 aa11.52□□□□□ -0.57
PDLIM1-202ENST00000477757 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
PDLIM1-202ENST00000477757 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
PDLIM1-202ENST00000477757 FAM74A3Q4VXF1 159 aa11.52□□□□□ -0.57
PDLIM1-202ENST00000477757 C2orf88Q9BSF0 95 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms