RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TAL2Q16559 108 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 SPATA25Q9BR10 227 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
PRPF39-203ENST00000477626 TRAV8-3A0A0A6YYJ7 113 aa8.22□□□□□ -1.09
PRPF39-203ENST00000477626 J3QQQ9 107 aa8.22□□□□□ -1.09
PRPF39-203ENST00000477626 HSD52Q0P140 79 aa8.22□□□□□ -1.09
PRPF39-203ENST00000477626 LINC01561Q8N1V8 128 aa8.22□□□□□ -1.09
PRPF39-203ENST00000477626 DEFB121Q5J5C9 76 aa8.22□□□□□ -1.09
PRPF39-203ENST00000477626 PKD1P98161 4303 aa8.22□□□□□ -1.09
PRPF39-203ENST00000477626 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.09
PRPF39-203ENST00000477626 IGHV3-30P01768 117 aa8.21□□□□□ -1.09
PRPF39-203ENST00000477626 IGHV3-30-5P0DP03 117 aa8.21□□□□□ -1.09
PRPF39-203ENST00000477626 NANOS2P60321 138 aaKnown RBP8.21□□□□□ -1.09
PRPF39-203ENST00000477626 SH2D6Q7Z4S9 175 aa8.21□□□□□ -1.09
PRPF39-203ENST00000477626 MRAPQ8TCY5 172 aa8.21□□□□□ -1.1
PRPF39-203ENST00000477626 A0A087WZ39 114 aa8.21□□□□□ -1.1
PRPF39-203ENST00000477626 HERVK_113P63121 156 aa8.21□□□□□ -1.1
PRPF39-203ENST00000477626 K7EP13 123 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 FXYD2P54710 66 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 GAGE6Q13070 117 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 CEND1Q8N111 149 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 HYDINQ4G0P3 5121 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 NDUFA1O15239 70 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
PRPF39-203ENST00000477626 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
PRPF39-203ENST00000477626 MRPL23Q16540 153 aaKnown RBP8.19□□□□□ -1.1
PRPF39-203ENST00000477626 ENHOQ6UWT2 76 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 PTTG1IPP53801 180 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 FOXI1Q12951 378 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 A0A1B0GV90 55 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 KIAA0087Q14695 138 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 ESRGQ1W209 222 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 ADAMTSL4-AS1Q5T5F5 129 aa8.19□□□□□ -1.1
PRPF39-203ENST00000477626 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
PRPF39-203ENST00000477626 TRAV8-6A0A0B4J262 113 aa8.18□□□□□ -1.1
PRPF39-203ENST00000477626 TIMM17BO60830 172 aa8.18□□□□□ -1.1
PRPF39-203ENST00000477626 SPINK8P0C7L1 97 aa8.18□□□□□ -1.1
PRPF39-203ENST00000477626 SEC11AP67812 179 aa8.17□□□□□ -1.1
PRPF39-203ENST00000477626 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
PRPF39-203ENST00000477626 SPANXDQ9BXN6 97 aa8.17□□□□□ -1.1
PRPF39-203ENST00000477626 SPANXCQ9NY87 97 aa8.17□□□□□ -1.1
PRPF39-203ENST00000477626 CCL25O15444 150 aa8.17□□□□□ -1.1
PRPF39-203ENST00000477626 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
PRPF39-203ENST00000477626 ZNF815PA8K554 130 aa8.16□□□□□ -1.1
PRPF39-203ENST00000477626 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
PRPF39-203ENST00000477626 Q6ZVH6 145 aa8.16□□□□□ -1.1
PRPF39-203ENST00000477626 SMAGPQ0VAQ4 97 aa8.16□□□□□ -1.1
PRPF39-203ENST00000477626 ORAOV1Q8WV07 137 aa8.16□□□□□ -1.1
PRPF39-203ENST00000477626 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
PRPF39-203ENST00000477626 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
PRPF39-203ENST00000477626 COX11Q9Y6N1 276 aa8.15□□□□□ -1.11
PRPF39-203ENST00000477626 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
PRPF39-203ENST00000477626 DNAH10OSP0CZ25 163 aa8.14□□□□□ -1.11
PRPF39-203ENST00000477626 HERVK_113P61574 105 aa8.14□□□□□ -1.11
PRPF39-203ENST00000477626 WFDC10BQ8IUB3 73 aa8.14□□□□□ -1.11
PRPF39-203ENST00000477626 UBE2L6O14933 153 aa8.14□□□□□ -1.11
PRPF39-203ENST00000477626 SACSQ9NZJ4 4579 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 DEFB131BA0A096LNP1 70 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 LOC107984156A0A0G2JMH3 177 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 ARL17AQ8IVW1 177 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 H3BRM9 83 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 LINC01556Q5JQF7 62 aa8.13□□□□□ -1.11
PRPF39-203ENST00000477626 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
PRPF39-203ENST00000477626 TRAV10A0A0B4J240 114 aa8.12□□□□□ -1.11
PRPF39-203ENST00000477626 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
PRPF39-203ENST00000477626 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
PRPF39-203ENST00000477626 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
PRPF39-203ENST00000477626 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
PRPF39-203ENST00000477626 REG3AQ06141 175 aa8.11□□□□□ -1.11
PRPF39-203ENST00000477626 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
PRPF39-203ENST00000477626 CFC1BP0CG36 223 aa8.1□□□□□ -1.11
PRPF39-203ENST00000477626 CFC1P0CG37 223 aa8.1□□□□□ -1.11
PRPF39-203ENST00000477626 MIAQ16674 131 aa8.1□□□□□ -1.11
PRPF39-203ENST00000477626 AMMECR1LQ6DCA0 310 aa8.1□□□□□ -1.11
PRPF39-203ENST00000477626 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
PRPF39-203ENST00000477626 Q8IZM0 81 aa8.09□□□□□ -1.11
PRPF39-203ENST00000477626 LGALS3P17931 250 aaKnown RBP8.09□□□□□ -1.11
PRPF39-203ENST00000477626 C15orf53Q8NAA6 179 aa8.09□□□□□ -1.11
PRPF39-203ENST00000477626 CHCHD10Q8WYQ3 142 aaPredicted RBP8.09□□□□□ -1.11
PRPF39-203ENST00000477626 GEMIN7Q9H840 131 aaKnown RBP8.09□□□□□ -1.11
PRPF39-203ENST00000477626 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
PRPF39-203ENST00000477626 K7ERJ3 54 aa8.08□□□□□ -1.12
PRPF39-203ENST00000477626 TENM2Q9NT68 2774 aa8.08□□□□□ -1.12
PRPF39-203ENST00000477626 DGAT2L7PQ6IED9 249 aa8.08□□□□□ -1.12
PRPF39-203ENST00000477626 KLK5Q9Y337 293 aaPredicted RBP8.08□□□□□ -1.12
PRPF39-203ENST00000477626 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
PRPF39-203ENST00000477626 HTN3P15516 51 aa8.07□□□□□ -1.12
PRPF39-203ENST00000477626 C15orf56Q8N910 161 aa8.06□□□□□ -1.12
PRPF39-203ENST00000477626 A0A0B4J2C4 111 aa8.06□□□□□ -1.12
PRPF39-203ENST00000477626 NHLRC4P0CG21 123 aaPredicted RBP8.06□□□□□ -1.12
PRPF39-203ENST00000477626 MUSTN1Q8IVN3 82 aa8.06□□□□□ -1.12
PRPF39-203ENST00000477626 Q9H8V8 135 aa8.06□□□□□ -1.12
PRPF39-203ENST00000477626 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
PRPF39-203ENST00000477626 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
PRPF39-203ENST00000477626 HERV-K104P63124 156 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms