RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
COL4A6-206ENST00000477085 HERVK_113P63121 156 aa9.83□□□□□ -0.84
COL4A6-206ENST00000477085 DNAH7Q8WXX0 4024 aa9.83□□□□□ -0.84
COL4A6-206ENST00000477085 FBN3Q75N90 2809 aa9.82□□□□□ -0.84
COL4A6-206ENST00000477085 ANGP03950 147 aaKnown RBP9.82□□□□□ -0.84
COL4A6-206ENST00000477085 HERVK_113P61574 105 aa9.82□□□□□ -0.84
COL4A6-206ENST00000477085 C15orf53Q8NAA6 179 aa9.82□□□□□ -0.84
COL4A6-206ENST00000477085 IGHV3-30P01768 117 aa9.81□□□□□ -0.84
COL4A6-206ENST00000477085 IGHV3-33P01772 117 aa9.81□□□□□ -0.84
COL4A6-206ENST00000477085 IGHV3-30-3P0DP02 117 aa9.81□□□□□ -0.84
COL4A6-206ENST00000477085 IGHV3-30-5P0DP03 117 aa9.81□□□□□ -0.84
COL4A6-206ENST00000477085 IGHV3OR16-9A0A0B4J2B5 98 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 LEPROTO15243 131 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 SEC11AP67812 179 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 BVES-AS1Q5T3Y7 98 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 LINC00588Q9Y4M8 146 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 MYMXA0A1B0GTQ4 84 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 J3QQQ9 107 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 SIVA1O15304 175 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 REG3AQ06141 175 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 LYSTQ99698 3801 aa9.8□□□□□ -0.84
COL4A6-206ENST00000477085 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
COL4A6-206ENST00000477085 ENHOQ6UWT2 76 aa9.79□□□□□ -0.84
COL4A6-206ENST00000477085 PRR34Q9NV39 138 aa9.79□□□□□ -0.84
COL4A6-206ENST00000477085 IGLV5-39A0A0G2JS06 123 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 CCL25O15444 150 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 IGLV10-54A0A075B6I4 117 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 H3BRM9 83 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 XCL1P47992 114 aa9.78□□□□□ -0.84
COL4A6-206ENST00000477085 SS18Q15532 418 aa9.77□□□□□ -0.85
COL4A6-206ENST00000477085 C5orf38Q86SI9 138 aa9.77□□□□□ -0.85
COL4A6-206ENST00000477085 APLNQ9ULZ1 77 aa9.77□□□□□ -0.85
COL4A6-206ENST00000477085 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
COL4A6-206ENST00000477085 A0A087WZ39 114 aa9.75□□□□□ -0.85
COL4A6-206ENST00000477085 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
COL4A6-206ENST00000477085 HSD52Q0P140 79 aa9.75□□□□□ -0.85
COL4A6-206ENST00000477085 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-206ENST00000477085 LINC01556Q5JQF7 62 aa9.75□□□□□ -0.85
COL4A6-206ENST00000477085 C10orf126Q8N4M7 172 aa9.75□□□□□ -0.85
COL4A6-206ENST00000477085 HIGD1BQ9P298 99 aa9.75□□□□□ -0.85
COL4A6-206ENST00000477085 DNAH1Q9P2D7 4330 aa9.74□□□□□ -0.85
COL4A6-206ENST00000477085 DNAH10OSP0CZ25 163 aa9.74□□□□□ -0.85
COL4A6-206ENST00000477085 CCL18P55774 89 aa9.73□□□□□ -0.85
COL4A6-206ENST00000477085 FOXI1Q12951 378 aa9.73□□□□□ -0.85
COL4A6-206ENST00000477085 CD164L2Q6UWJ8 174 aa9.73□□□□□ -0.85
COL4A6-206ENST00000477085 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
COL4A6-206ENST00000477085 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
COL4A6-206ENST00000477085 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
COL4A6-206ENST00000477085 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
COL4A6-206ENST00000477085 COX11Q9Y6N1 276 aa9.72□□□□□ -0.85
COL4A6-206ENST00000477085 TAX1BP3O14907 124 aa9.71□□□□□ -0.85
COL4A6-206ENST00000477085 KRTAP26-1Q6PEX3 210 aa9.71□□□□□ -0.85
COL4A6-206ENST00000477085 UPK3BQ9BT76 320 aa9.71□□□□□ -0.85
COL4A6-206ENST00000477085 TENM2Q9NT68 2774 aa9.71□□□□□ -0.86
COL4A6-206ENST00000477085 A0A0J9YXY3 114 aa9.7□□□□□ -0.86
COL4A6-206ENST00000477085 GAGE12HA6NDE8 117 aa9.7□□□□□ -0.86
COL4A6-206ENST00000477085 Q6ZVH6 145 aa9.7□□□□□ -0.86
COL4A6-206ENST00000477085 ORAOV1Q8WV07 137 aa9.7□□□□□ -0.86
COL4A6-206ENST00000477085 SCGB1D4Q6XE38 83 aa9.7□□□□□ -0.86
COL4A6-206ENST00000477085 NUPR2A6NF83 97 aa9.69□□□□□ -0.86
COL4A6-206ENST00000477085 NDUFA1O15239 70 aa9.69□□□□□ -0.86
COL4A6-206ENST00000477085 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
COL4A6-206ENST00000477085 COX7A2LO14548 114 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 CRPP02741 224 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 LITAFQ99732 161 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 Q9H8V8 135 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 K7EP13 123 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 MIAQ16674 131 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 TOMM7Q9P0U1 55 aa9.68□□□□□ -0.86
COL4A6-206ENST00000477085 ADAMTSL4-AS1Q5T5F5 129 aa9.67□□□□□ -0.86
COL4A6-206ENST00000477085 A6NDN8 102 aa9.66□□□□□ -0.86
COL4A6-206ENST00000477085 KIAA0087Q14695 138 aa9.66□□□□□ -0.86
COL4A6-206ENST00000477085 KLK5Q9Y337 293 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-206ENST00000477085 TGP01266 2768 aa9.66□□□□□ -0.86
COL4A6-206ENST00000477085 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.86
COL4A6-206ENST00000477085 FXYD2P54710 66 aa9.65□□□□□ -0.86
COL4A6-206ENST00000477085 TAL2Q16559 108 aa9.65□□□□□ -0.86
COL4A6-206ENST00000477085 CEND1Q8N111 149 aa9.65□□□□□ -0.86
COL4A6-206ENST00000477085 HIST1H4GQ99525 98 aa9.65□□□□□ -0.86
COL4A6-206ENST00000477085 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
COL4A6-206ENST00000477085 GCSHP23434 173 aa9.65□□□□□ -0.87
COL4A6-206ENST00000477085 KRTAP1-5Q9BYS1 174 aa9.65□□□□□ -0.87
COL4A6-206ENST00000477085 SPANXB1Q9NS25 103 aaPredicted RBP9.65□□□□□ -0.87
COL4A6-206ENST00000477085 MALP21145 153 aa9.63□□□□□ -0.87
COL4A6-206ENST00000477085 Q8IZM0 81 aa9.63□□□□□ -0.87
COL4A6-206ENST00000477085 Q9HAA7 133 aa9.63□□□□□ -0.87
COL4A6-206ENST00000477085 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
COL4A6-206ENST00000477085 SRSF9Q13242 221 aaKnown RBP eCLIP9.63□□□□□ -0.87
COL4A6-206ENST00000477085 C2orf82Q6UX34 121 aa9.63□□□□□ -0.87
COL4A6-206ENST00000477085 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-206ENST00000477085 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
COL4A6-206ENST00000477085 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
COL4A6-206ENST00000477085 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms