RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 A0A1B0GW15 77 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 A0A1W2PPM0 123 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 SYS1-DBNDD2H3BUS1 97 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 PSCAO43653 123 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 ANGP03950 147 aaKnown RBP6.44□□□□□ -1.38
HDAC3-208ENST00000476739 POLR2KP53803 58 aaKnown RBP6.44□□□□□ -1.38
HDAC3-208ENST00000476739 HBBP68871 147 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 CLPSL2Q6UWE3 100 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 C20orf203Q8NBC4 194 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 SPCS1Q9Y6A9 102 aa6.44□□□□□ -1.38
HDAC3-208ENST00000476739 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-208ENST00000476739 IGKV2-29A2NJV5 120 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-208ENST00000476739 C16orf90A8MZG2 172 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 I3L3M4 83 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 LEPROTL1O95214 131 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 TSHBP01222 138 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
HDAC3-208ENST00000476739 D6R8Y8 96 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 LECT2O14960 151 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 SMIM13P0DJ93 91 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 SMAGPQ0VAQ4 97 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 SPANXDQ9BXN6 97 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 PRR34Q9NV39 138 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
HDAC3-208ENST00000476739 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-208ENST00000476739 CKS2P33552 79 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 SUMO2P61956 95 aaKnown RBP6.41□□□□□ -1.38
HDAC3-208ENST00000476739 Q6ZVH6 145 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 BAALCQ8WXS3 180 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
HDAC3-208ENST00000476739 UBE2L6O14933 153 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 TNFRSF6BO95407 300 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 NPYP01303 97 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 CRPP02741 224 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 REG3AQ06141 175 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 RNASEKQ6P5S7 137 aaKnown RBP6.4□□□□□ -1.38
HDAC3-208ENST00000476739 KRTAP26-1Q6PEX3 210 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 Q8N814 137 aa6.4□□□□□ -1.38
HDAC3-208ENST00000476739 RYR1P21817 5038 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 IGLV10-54A0A075B6I4 117 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 H3BUT2 72 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 VCYO14598 125 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 FGF6P10767 208 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 ATOH7Q8N100 152 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 RMI2Q96E14 147 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 HIGD1BQ9P298 99 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 ERG28Q9UKR5 140 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 HERC2O95714 4834 aa6.39□□□□□ -1.39
HDAC3-208ENST00000476739 H7C423 109 aa6.38□□□□□ -1.39
HDAC3-208ENST00000476739 PPP1R17O96001 155 aa6.38□□□□□ -1.39
HDAC3-208ENST00000476739 TAL2Q16559 108 aa6.38□□□□□ -1.39
HDAC3-208ENST00000476739 MIAQ16674 131 aa6.38□□□□□ -1.39
HDAC3-208ENST00000476739 C20orf78Q9BR46 151 aa6.38□□□□□ -1.39
HDAC3-208ENST00000476739 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
HDAC3-208ENST00000476739 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.37□□□□□ -1.39
HDAC3-208ENST00000476739 IGKV3OR2-268A0A0C4DH90 116 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 FCER1GP30273 86 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 KRTAP10-1P60331 282 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 LYRM7Q5U5X0 104 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 ORMDL3Q8N138 153 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 PRELID3AQ96N28 172 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 SMIM2Q9BVW6 85 aa6.37□□□□□ -1.39
HDAC3-208ENST00000476739 RPL32P62910 135 aaKnown RBP6.36□□□□□ -1.39
HDAC3-208ENST00000476739 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
HDAC3-208ENST00000476739 KIR2DL4Q99706 377 aa6.36□□□□□ -1.39
HDAC3-208ENST00000476739 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
HDAC3-208ENST00000476739 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
HDAC3-208ENST00000476739 IGLV5-52A0A0A0MRZ9 124 aa6.35□□□□□ -1.39
HDAC3-208ENST00000476739 LOC389332A0A1B0GUA5 103 aa6.35□□□□□ -1.39
HDAC3-208ENST00000476739 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
HDAC3-208ENST00000476739 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
HDAC3-208ENST00000476739 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
HDAC3-208ENST00000476739 UBE2D4Q9Y2X8 147 aa6.35□□□□□ -1.39
HDAC3-208ENST00000476739 TRAV8-4A0A0B4J246 113 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 hDV102S1A0JD36 115 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 GCSHP23434 173 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 RPL39P62891 51 aaKnown RBP6.34□□□□□ -1.39
HDAC3-208ENST00000476739 LINC01620Q4KN68 170 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
HDAC3-208ENST00000476739 NTN5Q8WTR8 489 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-208ENST00000476739 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 TMEM126AQ9H061 195 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 HSPG2P98160 4391 aa6.34□□□□□ -1.39
HDAC3-208ENST00000476739 E9PLD3 99 aa6.33□□□□□ -1.4
HDAC3-208ENST00000476739 H3BMG7 143 aa6.33□□□□□ -1.4
HDAC3-208ENST00000476739 PRSS1P07477 247 aa6.33□□□□□ -1.4
HDAC3-208ENST00000476739 SPINK8P0C7L1 97 aa6.33□□□□□ -1.4
HDAC3-208ENST00000476739 CHCHD10Q8WYQ3 142 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-208ENST00000476739 TMEM101Q96IK0 257 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms