RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZNF137PP52743 207 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 COX17Q14061 63 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 SPINK9Q5DT21 86 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 BPTFQ12830 3046 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 ZMYM4Q5VZL5 1548 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 ARHGEF5Q12774 1597 aa1.55□□□□□ -2.16
SMC5-203ENST00000475540 DOCK11Q5JSL3 2073 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 IGLC1P0CG04 106 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 CFAP126Q5VTH2 177 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 SERP2Q8N6R1 65 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 TRGV9Q99603 122 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 PRR15LQ9BU68 103 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 PLEKHH2Q8IVE3 1493 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 MLH3Q9UHC1 1453 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 DNAH12Q6ZR08 3092 aa1.54□□□□□ -2.16
SMC5-203ENST00000475540 MARF1Q9Y4F3 1742 aaKnown RBP1.54□□□□□ -2.16
SMC5-203ENST00000475540 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 TRBV7-7A0A0K0K1E9 115 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 KIAA0556O60303 1618 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 GCHFRP30047 84 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 CUX1P39880 1505 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 Q6ZRX8 168 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 NXT2Q9NPJ8 142 aaKnown RBP1.53□□□□□ -2.16
SMC5-203ENST00000475540 ARHGEF12Q9NZN5 1544 aa1.53□□□□□ -2.16
SMC5-203ENST00000475540 CELSR3Q9NYQ7 3312 aa1.53□□□□□ -2.17
SMC5-203ENST00000475540 KNTC1P50748 2209 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 KIAA1551Q9HCM1 1747 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 CICQ96RK0 1608 aaPredicted RBP1.52□□□□□ -2.17
SMC5-203ENST00000475540 NWD1Q149M9 1564 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 GYPAP02724 150 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 SFTA2Q6UW10 78 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 ARL2-SNX15V9GYD0 113 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 F5P12259 2224 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 REV3LO60673 3130 aa1.52□□□□□ -2.17
SMC5-203ENST00000475540 WDFY4Q6ZS81 3184 aa1.51□□□□□ -2.17
SMC5-203ENST00000475540 SSC5DA1L4H1 1573 aa1.51□□□□□ -2.17
SMC5-203ENST00000475540 SPTBN4Q9H254 2564 aa1.51□□□□□ -2.17
SMC5-203ENST00000475540 FAUP35544 74 aaKnown RBP1.51□□□□□ -2.17
SMC5-203ENST00000475540 C9orf62Q8N4C0 152 aa1.51□□□□□ -2.17
SMC5-203ENST00000475540 CACFD1Q9UGQ2 172 aa1.51□□□□□ -2.17
SMC5-203ENST00000475540 CFAP54Q96N23 3096 aa1.51□□□□□ -2.17
SMC5-203ENST00000475540 FAM208BQ5VWN6 2430 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 A0A0G2JND7 137 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 SAA2P0DJI9 122 aaPredicted RBP1.5□□□□□ -2.17
SMC5-203ENST00000475540 FAM223AQ8IWN6 122 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 BIVM-ERCC5R4GMW8 1640 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 C2CD3Q4AC94 2353 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 PCLOQ9Y6V0 5065 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 BRCA2P51587 3418 aa1.5□□□□□ -2.17
SMC5-203ENST00000475540 MYO9AB2RTY4 2548 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 CFAP46Q8IYW2 2715 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 NAV3Q8IVL0 2385 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 SPEGQ15772 3267 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 MGPP08493 103 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 PROK2Q9HC23 129 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 NPVFQ9HCQ7 196 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 C5orf42Q9H799 3197 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 ABCC3O15438 1527 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 LRRC37A2A6NM11 1700 aa1.49□□□□□ -2.17
SMC5-203ENST00000475540 UQCRHLA0A096LP55 91 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 SYS1-DBNDD2H3BUS1 97 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 H7BZZ5 65 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 PIN1P1O15428 100 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 UQCRHP07919 91 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 PMCHL1Q16048 86 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 COL4A6Q14031 1691 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 LRP6O75581 1613 aa1.48□□□□□ -2.17
SMC5-203ENST00000475540 FBN2P35556 2912 aa1.47□□□□□ -2.17
SMC5-203ENST00000475540 DCHS1Q96JQ0 3298 aa1.47□□□□□ -2.17
SMC5-203ENST00000475540 TPRP12270 2363 aaKnown RBP1.47□□□□□ -2.17
SMC5-203ENST00000475540 CENPFP49454 3210 aa1.47□□□□□ -2.17
SMC5-203ENST00000475540 G3V318 75 aa1.47□□□□□ -2.17
SMC5-203ENST00000475540 HTTP42858 3142 aa1.47□□□□□ -2.17
SMC5-203ENST00000475540 SPG11Q96JI7 2443 aa1.47□□□□□ -2.17
SMC5-203ENST00000475540 EPRSP07814 1512 aaKnown RBP1.46□□□□□ -2.18
SMC5-203ENST00000475540 CLTCQ00610 1675 aaKnown RBP1.46□□□□□ -2.18
SMC5-203ENST00000475540 SCN7AQ01118 1682 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 ZNF236Q9UL36 1845 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 TRBV25-1A0A075B6N4 114 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 FAM223BA6NKX1 122 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 JMJD1CQ15652 2540 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 DNHD1Q96M86 4753 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 UNC13BO14795 1591 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 PRUNE2Q8WUY3 3088 aa1.46□□□□□ -2.18
SMC5-203ENST00000475540 WIZO95785 1651 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 SBF2Q86WG5 1849 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 RELNP78509 3460 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 FANCAO15360 1455 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 USP34Q70CQ2 3546 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 TEX15Q9BXT5 2789 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 CPS1P31327 1500 aa1.45□□□□□ -2.18
SMC5-203ENST00000475540 MON2Q7Z3U7 1717 aa1.44□□□□□ -2.18
SMC5-203ENST00000475540 A0A1B0GWA3 101 aa1.44□□□□□ -2.18
SMC5-203ENST00000475540 PYY3Q5JQD4 70 aa1.44□□□□□ -2.18
SMC5-203ENST00000475540 PSMG4Q5JS54 123 aa1.44□□□□□ -2.18
SMC5-203ENST00000475540 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
SMC5-203ENST00000475540 ACACBO00763 2458 aa1.44□□□□□ -2.18
SMC5-203ENST00000475540 MAP1BP46821 2468 aaKnown RBP1.44□□□□□ -2.18
SMC5-203ENST00000475540 POLQO75417 2590 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms