RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 C6orf201Q7Z4U5 140 aa2.54□□□□□ -2
RPSA-205ENST00000475346 FAM216BQ8N7L0 139 aa2.54□□□□□ -2
RPSA-205ENST00000475346 S100A13Q99584 98 aa2.54□□□□□ -2
RPSA-205ENST00000475346 FXYD6Q9H0Q3 95 aa2.54□□□□□ -2
RPSA-205ENST00000475346 DYNLRB1Q9NP97 96 aa2.54□□□□□ -2
RPSA-205ENST00000475346 NOP16Q9Y3C1 178 aaKnown RBP2.54□□□□□ -2
RPSA-205ENST00000475346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.54□□□□□ -28e-26■■■■■ 58.2
RPSA-205ENST00000475346 MGAM2Q2M2H8 2515 aa2.53□□□□□ -2
RPSA-205ENST00000475346 TRAV14DV4A0A0A6YYC5 116 aa2.53□□□□□ -2
RPSA-205ENST00000475346 TRBV27A0A0K0K1C4 114 aa2.53□□□□□ -2
RPSA-205ENST00000475346 C9orf170A2RU37 121 aa2.53□□□□□ -2
RPSA-205ENST00000475346 GEMIN2O14893 280 aaKnown RBP2.53□□□□□ -2
RPSA-205ENST00000475346 MPC2O95563 127 aa2.53□□□□□ -2
RPSA-205ENST00000475346 CFDP00746 253 aaPredicted RBP2.53□□□□□ -2
RPSA-205ENST00000475346 RBP2P50120 134 aa2.53□□□□□ -2
RPSA-205ENST00000475346 HIST1H1AQ02539 215 aaPredicted RBP2.53□□□□□ -2
RPSA-205ENST00000475346 SLC25A26Q70HW3 274 aa2.53□□□□□ -2
RPSA-205ENST00000475346 LINC00311Q8N616 119 aa2.53□□□□□ -2
RPSA-205ENST00000475346 DEFB108BQ8NET1 73 aa2.53□□□□□ -2
RPSA-205ENST00000475346 HUWE1Q7Z6Z7 4374 aaKnown RBP2.53□□□□□ -2
RPSA-205ENST00000475346 HERC2O95714 4834 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 IGKV2D-26A0A0A0MRZ7 120 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 OR2T8A6NH00 312 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 MCRIP1C9JLW8 97 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 M0R233 179 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 SFT2D2O95562 160 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 S100A1P23297 94 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 RAB5CP51148 216 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
RPSA-205ENST00000475346 ROMO1P60602 79 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 CCL8P80075 99 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 Q1T7F1 81 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 DEFB112Q30KQ8 113 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 MORN2Q502X0 79 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 OR2T2Q6IF00 324 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 HAGHLQ6PII5 290 aaPredicted RBP2.52□□□□□ -2.01
RPSA-205ENST00000475346 TEX261Q6UWH6 196 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 OR4B1Q8NGF8 309 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 PDCD10Q9BUL8 212 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 SMIM3Q9BZL3 60 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 U3KQ87 197 aa2.52□□□□□ -2.01
RPSA-205ENST00000475346 ARFGEF3Q5TH69 2177 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 PLECQ15149 4684 aaKnown RBP2.51□□□□□ -2.01
RPSA-205ENST00000475346 KIAA2026Q5HYC2 2103 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 CRYM-AS1A6NIL9 109 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 C17orf112F2Z3M2 114 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 CRPP02741 224 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 SLC25A4P12235 298 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 FXYD4P59646 89 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 S100A10P60903 97 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 CLLU1Q5K131 121 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 C1orf134Q5TEV5 83 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 ALKAL2Q6UX46 152 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 OR5A2Q8NGI9 324 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 DIRC1Q969H9 104 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 TNFSF18Q9UNG2 199 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 MPC1Q9Y5U8 109 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 CADP27708 2225 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 COL7A1Q02388 2944 aa2.51□□□□□ -2.01
RPSA-205ENST00000475346 STARD9Q9P2P6 4700 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 KANTRA0A1W2PQU2 76 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 CLPSL1A2RUU4 121 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 IQCF6A8MYZ5 107 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 NDUFA2O43678 99 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 MPV17LQ2QL34 196 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 FAM74A1Q5RGS3 127 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 KCNRGQ8N5I3 272 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 Q8N814 137 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 TMEM254Q8TBM7 123 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 PPP1R1CQ8WVI7 109 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 NMES1Q9C002 83 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 NAA60Q9H7X0 242 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 OR5AC2Q9NZP5 309 aa2.5□□□□□ -2.01
RPSA-205ENST00000475346 CSMD3Q7Z407 3707 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 TRBV6-7A0A0A0MS04 114 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 C2orf70A6NJV1 201 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 K7EIL1 84 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 SNAPC5O75971 98 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 PPYP01298 95 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 TFF1P04155 84 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 NMBP08949 121 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 MRPS36P82909 103 aaKnown RBP2.49□□□□□ -2.01
RPSA-205ENST00000475346 PRB3Q04118 309 aaPredicted RBP2.49□□□□□ -2.01
RPSA-205ENST00000475346 DEFB121Q5J5C9 76 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 RNASE11Q8TAA1 199 aaKnown RBP2.49□□□□□ -2.01
RPSA-205ENST00000475346 SFT2D1Q8WV19 159 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 RAB37Q96AX2 223 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 TP53RKQ96S44 253 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 VPS25Q9BRG1 176 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
RPSA-205ENST00000475346 TRAV12-1A0A0B4J245 112 aa2.48□□□□□ -2.01
RPSA-205ENST00000475346 C3orf85A0A1B0GTC6 90 aa2.48□□□□□ -2.01
RPSA-205ENST00000475346 hDV103S1A0JD37 113 aa2.48□□□□□ -2.01
RPSA-205ENST00000475346 M0R2Z0 102 aa2.48□□□□□ -2.01
RPSA-205ENST00000475346 TCRAP04437 139 aa2.48□□□□□ -2.01
RPSA-205ENST00000475346 TPT1P13693 172 aaKnown RBP2.48□□□□□ -2.01
RPSA-205ENST00000475346 FABP4P15090 132 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms