RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 IGHV3-30P01768 117 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 IGHV3-33P01772 117 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 IGHV3-30-5P0DP03 117 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 CTAG1AP78358 180 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
TRAF4-210ENST00000475329 TRAV8-3A0A0A6YYJ7 113 aa9.35□□□□□ -0.91
TRAF4-210ENST00000475329 CCL18P55774 89 aa9.35□□□□□ -0.91
TRAF4-210ENST00000475329 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
TRAF4-210ENST00000475329 IGHV3OR16-9A0A0B4J2B5 98 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 NUPR2A6NF83 97 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 CRPP02741 224 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 PRR34Q9NV39 138 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
TRAF4-210ENST00000475329 IGLV5-39A0A0G2JS06 123 aa9.33□□□□□ -0.92
TRAF4-210ENST00000475329 XCL1P47992 114 aa9.33□□□□□ -0.92
TRAF4-210ENST00000475329 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
TRAF4-210ENST00000475329 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
TRAF4-210ENST00000475329 A0A087WZ39 114 aa9.32□□□□□ -0.92
TRAF4-210ENST00000475329 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
TRAF4-210ENST00000475329 KLK5Q9Y337 293 aaPredicted RBP9.32□□□□□ -0.92
TRAF4-210ENST00000475329 M0R143 59 aa9.31□□□□□ -0.92
TRAF4-210ENST00000475329 DNAH10OSP0CZ25 163 aa9.31□□□□□ -0.92
TRAF4-210ENST00000475329 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
TRAF4-210ENST00000475329 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
TRAF4-210ENST00000475329 LINC01561Q8N1V8 128 aa9.31□□□□□ -0.92
TRAF4-210ENST00000475329 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 HSD52Q0P140 79 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 ZFAND6Q6FIF0 208 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 ENHOQ6UWT2 76 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 C5orf38Q86SI9 138 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 NDUFA12Q9UI09 145 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
TRAF4-210ENST00000475329 TRAV8-4A0A0B4J246 113 aa9.29□□□□□ -0.92
TRAF4-210ENST00000475329 COX7A2LO14548 114 aa9.29□□□□□ -0.92
TRAF4-210ENST00000475329 EREGO14944 169 aa9.29□□□□□ -0.92
TRAF4-210ENST00000475329 MIAQ16674 131 aa9.29□□□□□ -0.92
TRAF4-210ENST00000475329 SNHG12Q9BXW3 62 aa9.29□□□□□ -0.92
TRAF4-210ENST00000475329 TGP01266 2768 aa9.28□□□□□ -0.92
TRAF4-210ENST00000475329 NDUFA1O15239 70 aa9.28□□□□□ -0.92
TRAF4-210ENST00000475329 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
TRAF4-210ENST00000475329 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
TRAF4-210ENST00000475329 GAGE12HA6NDE8 117 aa9.27□□□□□ -0.93
TRAF4-210ENST00000475329 FOXI1Q12951 378 aa9.27□□□□□ -0.93
TRAF4-210ENST00000475329 BATFQ16520 125 aa9.27□□□□□ -0.93
TRAF4-210ENST00000475329 TAL2Q16559 108 aa9.27□□□□□ -0.93
TRAF4-210ENST00000475329 UBE2DNLQ8IWF7 75 aa9.27□□□□□ -0.93
TRAF4-210ENST00000475329 COX7B2Q8TF08 81 aa9.27□□□□□ -0.93
TRAF4-210ENST00000475329 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
TRAF4-210ENST00000475329 C10orf126Q8N4M7 172 aa9.26□□□□□ -0.93
TRAF4-210ENST00000475329 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
TRAF4-210ENST00000475329 MALP21145 153 aa9.25□□□□□ -0.93
TRAF4-210ENST00000475329 BVES-AS1Q5T3Y7 98 aa9.25□□□□□ -0.93
TRAF4-210ENST00000475329 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
TRAF4-210ENST00000475329 Q9H8V8 135 aa9.25□□□□□ -0.93
TRAF4-210ENST00000475329 SPANXB1Q9NS25 103 aaPredicted RBP9.25□□□□□ -0.93
TRAF4-210ENST00000475329 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
TRAF4-210ENST00000475329 PRSS2P07478 247 aa9.24□□□□□ -0.93
TRAF4-210ENST00000475329 HERV-K104P63124 156 aa9.24□□□□□ -0.93
TRAF4-210ENST00000475329 Q8IZM0 81 aa9.24□□□□□ -0.93
TRAF4-210ENST00000475329 ORAOV1Q8WV07 137 aa9.24□□□□□ -0.93
TRAF4-210ENST00000475329 ZNF625Q96I27 306 aaPredicted RBP9.24□□□□□ -0.93
TRAF4-210ENST00000475329 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
TRAF4-210ENST00000475329 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
TRAF4-210ENST00000475329 APOMO95445 188 aa9.23□□□□□ -0.93
TRAF4-210ENST00000475329 GCSHP23434 173 aa9.23□□□□□ -0.93
TRAF4-210ENST00000475329 LBHQ53QV2 105 aaPredicted RBP9.23□□□□□ -0.93
TRAF4-210ENST00000475329 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
TRAF4-210ENST00000475329 CEND1Q8N111 149 aa9.23□□□□□ -0.93
TRAF4-210ENST00000475329 TIMM17BO60830 172 aa9.22□□□□□ -0.93
TRAF4-210ENST00000475329 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.932e-6■■□□□ 13.7
TRAF4-210ENST00000475329 K7EP13 123 aa9.21□□□□□ -0.94
TRAF4-210ENST00000475329 C6orf226Q5I0X4 101 aa9.21□□□□□ -0.94
TRAF4-210ENST00000475329 CFAP161Q6P656 301 aa9.21□□□□□ -0.94
TRAF4-210ENST00000475329 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
TRAF4-210ENST00000475329 Q9HAA7 133 aa9.21□□□□□ -0.94
TRAF4-210ENST00000475329 DYNC2H1Q8NCM8 4307 aaKnown RBP9.21□□□□□ -0.94
TRAF4-210ENST00000475329 IGKV2D-24A0A075B6R9 120 aa9.2□□□□□ -0.94
TRAF4-210ENST00000475329 CIRBPQ14011 172 aaKnown RBP9.2□□□□□ -0.94
TRAF4-210ENST00000475329 COL5A1-AS1Q5SY13 56 aa9.2□□□□□ -0.94
TRAF4-210ENST00000475329 RMI2Q96E14 147 aa9.2□□□□□ -0.94
TRAF4-210ENST00000475329 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
TRAF4-210ENST00000475329 A6NDN8 102 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 CXCL5P42830 114 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 FXYD2P54710 66 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 MUC7Q8TAX7 377 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 LITAFQ99732 161 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 SPANXDQ9BXN6 97 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
TRAF4-210ENST00000475329 CKS1BP61024 79 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms