RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 SMG1Q96Q15 3661 aaKnown RBP3.44□□□□□ -1.86
NPHP3-206ENST00000474871 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 hDV103S1A0JD37 113 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 NXPH4O95158 308 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 IGHV4-59P01825 116 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 ICOSQ9Y6W8 199 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 ALMS1Q8TCU4 4167 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 IGHV3OR16-9A0A0B4J2B5 98 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 A0A0J9YXV3 536 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 BAALC-AS2P0C853 105 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 UBE2BP63146 152 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 NDPQ00604 133 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 ZNF702PQ9H963 129 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 MAP6D1Q9H9H5 199 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 FUSP35637 526 aaKnown RBP eCLIP3.44□□□□□ -1.86
NPHP3-206ENST00000474871 ZNF833PQ6ZTB9 187 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 MIFP14174 115 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 Q6ZS46 218 aa3.44□□□□□ -1.86
NPHP3-206ENST00000474871 LEPROTO15243 131 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 IGLV2-14P01704 120 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 SHANK1Q9Y566 2161 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV1-39P01597 117 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV1D-39P04432 117 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
NPHP3-206ENST00000474871 C16orf74Q96GX8 76 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 Q9HAA7 133 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 LRRK2Q5S007 2527 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 DMXL2Q8TDJ6 3036 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 TET2Q6N021 2002 aaPredicted RBP3.43□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV2-40A0A087WW87 121 aaPredicted RBP3.43□□□□□ -1.86
NPHP3-206ENST00000474871 TRAV22A0A0B4J277 110 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 C3orf84H3BNL1 204 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV2D-40P01614 121 aaPredicted RBP3.43□□□□□ -1.86
NPHP3-206ENST00000474871 ATXN8Q156A1 80 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 ESRGQ1W209 222 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 SPINK13Q1W4C9 94 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 CELA1Q9UNI1 258 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 HIVEP3Q5T1R4 2406 aa3.43□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV2D-24A0A075B6R9 120 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV3D-20A0A0C4DH25 116 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 G3V318 75 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 BCE1O60756 84 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 FXYD7P58549 80 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 ZNF462Q96JM2 2506 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 ANGP03950 147 aaKnown RBP3.42□□□□□ -1.86
NPHP3-206ENST00000474871 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 IGLV2-18A0A075B6J9 118 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 A0A0J9YY99 117 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 P0C879 139 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 C14orf178Q8N769 122 aaPredicted RBP3.42□□□□□ -1.86
NPHP3-206ENST00000474871 MGAQ8IWI9 3026 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 ARMS2P0C7Q2 107 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
NPHP3-206ENST00000474871 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 DAND5Q8N907 189 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 NDUFA4L2Q9NRX3 87 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 ABCA2Q9BZC7 2435 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 ZFYVE26Q68DK2 2539 aa3.42□□□□□ -1.86
NPHP3-206ENST00000474871 I3L3M4 83 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 IGLV1-51P01701 117 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 IGLV2-11P01706 119 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 C20orf197Q8N268 126 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 NDUFA3O95167 84 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 NANOS2P60321 138 aaKnown RBP3.41□□□□□ -1.86
NPHP3-206ENST00000474871 TMEM141Q96I45 108 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 TMEM14CQ9P0S9 112 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 IGKV1OR2-108A0A075B7D4 117 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 IGHV3-73A0A0B4J1V6 119 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 SH2D1AO60880 128 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 EIF4EBP1Q13541 118 aaPredicted RBP3.41□□□□□ -1.86
NPHP3-206ENST00000474871 SMIM2Q9BVW6 85 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 ZNRD1Q9P1U0 126 aa3.41□□□□□ -1.86
NPHP3-206ENST00000474871 DSPP15924 2871 aaKnown RBP3.41□□□□□ -1.86
NPHP3-206ENST00000474871 CLEC2BQ92478 149 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 SOCS3O14543 225 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 MOBPQ13875 183 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 LYZL1Q6UWQ5 148 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 C4orf3Q8WVX3 66 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 MYO9AB2RTY4 2548 aa3.4□□□□□ -1.86
NPHP3-206ENST00000474871 KALRNO60229 2985 aa3.4□□□□□ -1.87
NPHP3-206ENST00000474871 AKAP9Q99996 3911 aa3.4□□□□□ -1.87
NPHP3-206ENST00000474871 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
NPHP3-206ENST00000474871 PRO1854Q9UHT4 67 aa3.4□□□□□ -1.87
NPHP3-206ENST00000474871 TRAV3A0A0B4J244 114 aa3.4□□□□□ -1.87
NPHP3-206ENST00000474871 JMJD1CQ15652 2540 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 ANKRD11Q6UB99 2663 aaPredicted RBP3.39□□□□□ -1.87
NPHP3-206ENST00000474871 BLCAPP62952 87 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 C17orf58Q2M2W7 97 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 DYNAPQ8N1N2 210 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 DNAJC9-AS1A6NH13 148 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 INAFM1C9JVW0 142 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 Q86TA4 180 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 NPBQ8NG41 125 aa3.39□□□□□ -1.87
NPHP3-206ENST00000474871 BBC3Q96PG8 261 aaPredicted RBP3.39□□□□□ -1.87
NPHP3-206ENST00000474871 ANKRD17O75179 2603 aaKnown RBP3.39□□□□□ -1.87
NPHP3-206ENST00000474871 PSPHP1O15172 72 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms