RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, human

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE1-222	ENST00000473373	SEC11C	Q9BY50	192 aa		7.38	□□□□□ -1.23
CPNE1-222	ENST00000473373	IGLV4-69	A0A075B6H9	119 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373		A0A087WYN8	130 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	PANO1	I0J062	215 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	ADCYAP1	P18509	176 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	ORMDL2	Q53FV1	153 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	IMMP2L	Q96T52	175 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	OPRPN	Q99935	248 aa	Predicted RBP	7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	CYSLTR1	Q9Y271	337 aa		7.37	□□□□□ -1.23
CPNE1-222	ENST00000473373	MRPS36	P82909	103 aa	Known RBP	7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	SPAG11B	Q08648	103 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	TEX43	Q6ZNM6	134 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	STPG4	Q8N801	248 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373		Q8N8P6	123 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	SPACA4	Q8TDM5	124 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	ORAOV1	Q8WV07	137 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	TMEM141	Q96I45	108 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	NXT2	Q9NPJ8	142 aa	Known RBP	7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	LINC00474	Q9P2X8	69 aa		7.36	□□□□□ -1.23
CPNE1-222	ENST00000473373	TRAV9-1	A0A075B6T8	112 aa		7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	G0S2	P27469	103 aa		7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	RPL18A	Q02543	176 aa	Known RBP	7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	GAGE2B	Q13066	116 aa		7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	KIAA1644	Q3SXP7	199 aa		7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	C2orf66	Q6UXQ4	117 aa		7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	RPS10P5	Q9NQ39	176 aa		7.35	□□□□□ -1.23
CPNE1-222	ENST00000473373	HMCN2	Q8NDA2	5059 aa		7.34	□□□□□ -1.23
CPNE1-222	ENST00000473373		A0A096LNI7	61 aa		7.34	□□□□□ -1.23
CPNE1-222	ENST00000473373	LOC107984640	A0A0U1RRK4	108 aa		7.34	□□□□□ -1.23
CPNE1-222	ENST00000473373	CIRBP	Q14011	172 aa	Known RBP	7.33	□□□□□ -1.24
CPNE1-222	ENST00000473373	NDUFA5	Q16718	116 aa		7.33	□□□□□ -1.24
CPNE1-222	ENST00000473373		Q6ZRU5	148 aa		7.33	□□□□□ -1.24
CPNE1-222	ENST00000473373	OR10D4P	Q8NGN7	298 aa		7.33	□□□□□ -1.24
CPNE1-222	ENST00000473373	VCX2	Q9H322	139 aa		7.33	□□□□□ -1.24
CPNE1-222	ENST00000473373	IGLV4-3	A0A075B6K6	122 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	PRSS47	A8MTI9	375 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373		K7EMI3	77 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	NDUFA1	O15239	70 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	RHEB	Q15382	184 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	COX19	Q49B96	90 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	PAPPA-AS1	Q5QFB9	102 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	C2orf48	Q96LS8	159 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	SMCO4	Q9NRQ5	59 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	PYGO1	Q9Y3Y4	419 aa		7.32	□□□□□ -1.24
CPNE1-222	ENST00000473373	PRSS2	P07478	247 aa		7.31	□□□□□ -1.24
CPNE1-222	ENST00000473373	FABP9	Q0Z7S8	132 aa		7.31	□□□□□ -1.24
CPNE1-222	ENST00000473373	PLAC8	Q9NZF1	115 aa		7.31	□□□□□ -1.24
CPNE1-222	ENST00000473373	MT-ND6	P03923	174 aa		7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	LOR	P23490	312 aa	Predicted RBP	7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	FA2H	Q7L5A8	372 aa		7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	PACRG	Q96M98	296 aa	Predicted RBP	7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	GNB1L	Q9BYB4	327 aa		7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	GEMIN7	Q9H840	131 aa	Known RBP	7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	TOMM7	Q9P0U1	55 aa		7.3	□□□□□ -1.24
CPNE1-222	ENST00000473373	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373		A0A0J9YXV3	536 aa		7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373	KRTAP29-1	A8MX34	341 aa	Predicted RBP	7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373	APOC3	P02656	99 aa		7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373	PTTG1IP	P53801	180 aa		7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373	ZC2HC1B	Q5TFG8	222 aa		7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373	SCGB3A1	Q96QR1	104 aa		7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373	MRPL18	Q9H0U6	180 aa	Known RBP	7.29	□□□□□ -1.24
CPNE1-222	ENST00000473373		F8WDY8	70 aa		7.28	□□□□□ -1.24
CPNE1-222	ENST00000473373	UBE2D1	P51668	147 aa		7.28	□□□□□ -1.24
CPNE1-222	ENST00000473373	SEC11A	P67812	179 aa		7.28	□□□□□ -1.24
CPNE1-222	ENST00000473373	LINC00242	Q5T6M2	205 aa		7.28	□□□□□ -1.24
CPNE1-222	ENST00000473373	CARHSP1	Q9Y2V2	147 aa	Known RBP	7.28	□□□□□ -1.24
CPNE1-222	ENST00000473373		A0A087WZ39	114 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	SNAPIN	O95295	136 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	CKS1B	P61024	79 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	SERTAD4-AS1	Q5TG53	156 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	FAM104A	Q969W3	186 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	TRAPPC1	Q9Y5R8	145 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	DNAH8	Q96JB1	4490 aa		7.27	□□□□□ -1.25
CPNE1-222	ENST00000473373	LINC01549	A6NIU2	74 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	OXT	P01178	125 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	NPS	P0C0P6	89 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	KRTAP10-4	P60372	401 aa	Predicted RBP	7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	HERVK_113	P63121	156 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	GAGE2E	Q4V326	116 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	SVBP	Q8N300	66 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	TOMM6	Q96B49	74 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	MRPL35	Q9NZE8	188 aa	Known RBP	7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	GAGE2D	Q9UEU5	116 aa		7.26	□□□□□ -1.25
CPNE1-222	ENST00000473373	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	RNF151	Q2KHN1	245 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	C6orf226	Q5I0X4	101 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	C10orf91	Q5T1B1	145 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	ERAS	Q7Z444	233 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	AMELX	Q99217	191 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	TIMM17A	Q99595	171 aa		7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	ALKBH7	Q9BT30	221 aa	Predicted RBP	7.25	□□□□□ -1.25
CPNE1-222	ENST00000473373	IGIP	A6NJ69	53 aa		7.24	□□□□□ -1.25
CPNE1-222	ENST00000473373	HNRNPA3	P51991	378 aa	Known RBP	7.24	□□□□□ -1.25
CPNE1-222	ENST00000473373	NDUFA6	P56556	154 aa		7.24	□□□□□ -1.25
CPNE1-222	ENST00000473373	C9orf116	Q5BN46	136 aa	Predicted RBP	7.24	□□□□□ -1.25
CPNE1-222	ENST00000473373	LINC00173	Q6ZV60	143 aa		7.24	□□□□□ -1.25
CPNE1-222	ENST00000473373	LINC00469	Q8N7U9	141 aa		7.24	□□□□□ -1.25
CPNE1-222	ENST00000473373	PRR3	P79522	188 aa	Known RBP	7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms